Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0678:0719
Extra
PDB:
ATOM 1 O3' G A 677 52.144 71.026 47.719 1.00 42.38 O
ATOM 2 P G A 678 53.396 71.759 48.395 1.00 43.78 P
ATOM 3 OP1 G A 678 53.035 71.951 49.822 1.00 40.23 O
ATOM 4 OP2 G A 678 53.778 72.930 47.565 1.00 43.57 O
ATOM 5 O5' G A 678 54.572 70.696 48.278 1.00 41.09 O
ATOM 6 C5' G A 678 54.476 69.431 48.928 1.00 38.96 C
ATOM 7 C4' G A 678 55.523 68.495 48.393 1.00 39.32 C
ATOM 8 O4' G A 678 55.296 68.264 46.981 1.00 40.07 O
ATOM 9 C3' G A 678 56.951 69.005 48.408 1.00 39.85 C
ATOM 10 O3' G A 678 57.534 68.924 49.699 1.00 40.61 O
ATOM 11 C2' G A 678 57.620 68.055 47.428 1.00 38.99 C
ATOM 12 O2' G A 678 57.878 66.794 48.018 1.00 38.03 O
ATOM 13 C1' G A 678 56.526 67.906 46.366 1.00 39.19 C
ATOM 14 N9 G A 678 56.742 68.745 45.188 1.00 39.84 N
ATOM 15 C8 G A 678 56.191 69.974 44.913 1.00 39.50 C
ATOM 16 N7 G A 678 56.619 70.486 43.790 1.00 39.51 N
ATOM 17 C5 G A 678 57.500 69.537 43.291 1.00 39.59 C
ATOM 18 C6 G A 678 58.298 69.540 42.111 1.00 40.56 C
ATOM 19 O6 G A 678 58.395 70.416 41.243 1.00 40.42 O
ATOM 20 N1 G A 678 59.046 68.375 41.999 1.00 40.98 N
ATOM 21 C2 G A 678 59.040 67.343 42.900 1.00 40.54 C
ATOM 22 N2 G A 678 59.844 66.305 42.630 1.00 40.61 N
ATOM 23 N3 G A 678 58.307 67.329 43.994 1.00 41.15 N
ATOM 24 C4 G A 678 57.572 68.450 44.130 1.00 39.52 C
ATOM 25 P G A 679 58.643 69.996 50.129 1.00 41.19 P
ATOM 26 OP1 G A 679 59.035 69.715 51.536 1.00 42.11 O
ATOM 27 OP2 G A 679 58.127 71.332 49.774 1.00 42.06 O
ATOM 28 O5' G A 679 59.876 69.652 49.182 1.00 41.04 O
TER
ATOM 1 O3' U B 718 59.203 63.561 43.895 1.00 41.70 O
ATOM 2 P C B 719 60.591 62.851 44.288 1.00 44.41 P
ATOM 3 OP1 C B 719 61.624 63.292 43.321 1.00 46.72 O
ATOM 4 OP2 C B 719 60.352 61.407 44.485 1.00 45.87 O
ATOM 5 O5' C B 719 60.952 63.475 45.705 1.00 45.98 O
ATOM 6 C5' C B 719 61.385 64.844 45.829 1.00 45.52 C
ATOM 7 C4' C B 719 61.826 65.118 47.243 1.00 44.44 C
ATOM 8 O4' C B 719 60.687 65.105 48.140 1.00 44.82 O
ATOM 9 C3' C B 719 62.759 64.072 47.814 1.00 44.29 C
ATOM 10 O3' C B 719 64.080 64.308 47.379 1.00 46.12 O
ATOM 11 C2' C B 719 62.570 64.251 49.313 1.00 45.31 C
ATOM 12 O2' C B 719 63.262 65.370 49.823 1.00 44.58 O
ATOM 13 C1' C B 719 61.073 64.549 49.388 1.00 46.10 C
ATOM 14 N1 C B 719 60.225 63.373 49.673 1.00 46.68 N
ATOM 15 C2 C B 719 59.875 63.102 51.000 1.00 46.76 C
ATOM 16 O2 C B 719 60.308 63.829 51.899 1.00 48.07 O
ATOM 17 N3 C B 719 59.075 62.056 51.272 1.00 47.57 N
ATOM 18 C4 C B 719 58.630 61.286 50.285 1.00 48.04 C
ATOM 19 N4 C B 719 57.835 60.267 50.608 1.00 49.64 N
ATOM 20 C5 C B 719 58.979 61.524 48.925 1.00 48.24 C
ATOM 21 C6 C B 719 59.773 62.567 48.667 1.00 46.90 C
ATOM 22 P U B 720 65.142 63.115 47.402 1.00 48.23 P
ATOM 23 OP1 U B 720 66.459 63.666 47.006 1.00 49.39 O
ATOM 24 OP2 U B 720 64.569 61.978 46.648 1.00 50.53 O
ATOM 25 O5' U B 720 65.222 62.737 48.942 1.00 49.09 O
TER
ATOM 2 P G A 678 53.396 71.759 48.395 1.00 43.78 P
ATOM 3 OP1 G A 678 53.035 71.951 49.822 1.00 40.23 O
ATOM 4 OP2 G A 678 53.778 72.930 47.565 1.00 43.57 O
ATOM 5 O5' G A 678 54.572 70.696 48.278 1.00 41.09 O
ATOM 6 C5' G A 678 54.476 69.431 48.928 1.00 38.96 C
ATOM 7 C4' G A 678 55.523 68.495 48.393 1.00 39.32 C
ATOM 8 O4' G A 678 55.296 68.264 46.981 1.00 40.07 O
ATOM 9 C3' G A 678 56.951 69.005 48.408 1.00 39.85 C
ATOM 10 O3' G A 678 57.534 68.924 49.699 1.00 40.61 O
ATOM 11 C2' G A 678 57.620 68.055 47.428 1.00 38.99 C
ATOM 12 O2' G A 678 57.878 66.794 48.018 1.00 38.03 O
ATOM 13 C1' G A 678 56.526 67.906 46.366 1.00 39.19 C
ATOM 14 N9 G A 678 56.742 68.745 45.188 1.00 39.84 N
ATOM 15 C8 G A 678 56.191 69.974 44.913 1.00 39.50 C
ATOM 16 N7 G A 678 56.619 70.486 43.790 1.00 39.51 N
ATOM 17 C5 G A 678 57.500 69.537 43.291 1.00 39.59 C
ATOM 18 C6 G A 678 58.298 69.540 42.111 1.00 40.56 C
ATOM 19 O6 G A 678 58.395 70.416 41.243 1.00 40.42 O
ATOM 20 N1 G A 678 59.046 68.375 41.999 1.00 40.98 N
ATOM 21 C2 G A 678 59.040 67.343 42.900 1.00 40.54 C
ATOM 22 N2 G A 678 59.844 66.305 42.630 1.00 40.61 N
ATOM 23 N3 G A 678 58.307 67.329 43.994 1.00 41.15 N
ATOM 24 C4 G A 678 57.572 68.450 44.130 1.00 39.52 C
ATOM 25 P G A 679 58.643 69.996 50.129 1.00 41.19 P
ATOM 26 OP1 G A 679 59.035 69.715 51.536 1.00 42.11 O
ATOM 27 OP2 G A 679 58.127 71.332 49.774 1.00 42.06 O
ATOM 28 O5' G A 679 59.876 69.652 49.182 1.00 41.04 O
TER
ATOM 1 O3' U B 718 59.203 63.561 43.895 1.00 41.70 O
ATOM 2 P C B 719 60.591 62.851 44.288 1.00 44.41 P
ATOM 3 OP1 C B 719 61.624 63.292 43.321 1.00 46.72 O
ATOM 4 OP2 C B 719 60.352 61.407 44.485 1.00 45.87 O
ATOM 5 O5' C B 719 60.952 63.475 45.705 1.00 45.98 O
ATOM 6 C5' C B 719 61.385 64.844 45.829 1.00 45.52 C
ATOM 7 C4' C B 719 61.826 65.118 47.243 1.00 44.44 C
ATOM 8 O4' C B 719 60.687 65.105 48.140 1.00 44.82 O
ATOM 9 C3' C B 719 62.759 64.072 47.814 1.00 44.29 C
ATOM 10 O3' C B 719 64.080 64.308 47.379 1.00 46.12 O
ATOM 11 C2' C B 719 62.570 64.251 49.313 1.00 45.31 C
ATOM 12 O2' C B 719 63.262 65.370 49.823 1.00 44.58 O
ATOM 13 C1' C B 719 61.073 64.549 49.388 1.00 46.10 C
ATOM 14 N1 C B 719 60.225 63.373 49.673 1.00 46.68 N
ATOM 15 C2 C B 719 59.875 63.102 51.000 1.00 46.76 C
ATOM 16 O2 C B 719 60.308 63.829 51.899 1.00 48.07 O
ATOM 17 N3 C B 719 59.075 62.056 51.272 1.00 47.57 N
ATOM 18 C4 C B 719 58.630 61.286 50.285 1.00 48.04 C
ATOM 19 N4 C B 719 57.835 60.267 50.608 1.00 49.64 N
ATOM 20 C5 C B 719 58.979 61.524 48.925 1.00 48.24 C
ATOM 21 C6 C B 719 59.773 62.567 48.667 1.00 46.90 C
ATOM 22 P U B 720 65.142 63.115 47.402 1.00 48.23 P
ATOM 23 OP1 U B 720 66.459 63.666 47.006 1.00 49.39 O
ATOM 24 OP2 U B 720 64.569 61.978 46.648 1.00 50.53 O
ATOM 25 O5' U B 720 65.222 62.737 48.942 1.00 49.09 O
TER
Atoms:
OP1: (53.035,71.951,49.822)
OP2: (53.778,72.930,47.565)
C3': (56.951,69.005,48.408)
C1': (56.526,67.906,46.366)
C5': (54.476,69.431,48.928)
O6: (58.395,70.416,41.243)
O4': (55.296,68.264,46.981)
C8: (56.191,69.974,44.913)
C2: (59.040,67.343,42.900)
C6: (58.298,69.540,42.111)
C5: (57.500,69.537,43.291)
C4: (57.572,68.450,44.130)
P: (53.396,71.759,48.395)
C4': (55.523,68.495,48.393)
C2': (57.620,68.055,47.428)
O2': (57.878,66.794,48.018)
N1: (59.046,68.375,41.999)
N2: (59.844,66.305,42.630)
N3: (58.307,67.329,43.994)
N7: (56.619,70.486,43.790)
N9: (56.742,68.745,45.188)
O5': (54.572,70.696,48.278)
O3': (57.534,68.924,49.699)
OP2: (53.778,72.930,47.565)
C3': (56.951,69.005,48.408)
C1': (56.526,67.906,46.366)
C5': (54.476,69.431,48.928)
O6: (58.395,70.416,41.243)
O4': (55.296,68.264,46.981)
C8: (56.191,69.974,44.913)
C2: (59.040,67.343,42.900)
C6: (58.298,69.540,42.111)
C5: (57.500,69.537,43.291)
C4: (57.572,68.450,44.130)
P: (53.396,71.759,48.395)
C4': (55.523,68.495,48.393)
C2': (57.620,68.055,47.428)
O2': (57.878,66.794,48.018)
N1: (59.046,68.375,41.999)
N2: (59.844,66.305,42.630)
N3: (58.307,67.329,43.994)
N7: (56.619,70.486,43.790)
N9: (56.742,68.745,45.188)
O5': (54.572,70.696,48.278)
O3': (57.534,68.924,49.699)
C2: (59.875,63.102,51.000)
OP1: (61.624,63.292,43.321)
OP2: (60.352,61.407,44.485)
C4: (58.630,61.286,50.285)
O5': (60.952,63.475,45.705)
C3': (62.759,64.072,47.814)
C1': (61.073,64.549,49.388)
O4': (60.687,65.105,48.140)
C5': (61.385,64.844,45.829)
P: (60.591,62.851,44.288)
O2: (60.308,63.829,51.899)
C4': (61.826,65.118,47.243)
C2': (62.570,64.251,49.313)
O2': (63.262,65.370,49.823)
N1: (60.225,63.373,49.673)
N3: (59.075,62.056,51.272)
N4: (57.835,60.267,50.608)
C6: (59.773,62.567,48.667)
C5: (58.979,61.524,48.925)
O3': (64.080,64.308,47.379)
OP1: (61.624,63.292,43.321)
OP2: (60.352,61.407,44.485)
C4: (58.630,61.286,50.285)
O5': (60.952,63.475,45.705)
C3': (62.759,64.072,47.814)
C1': (61.073,64.549,49.388)
O4': (60.687,65.105,48.140)
C5': (61.385,64.844,45.829)
P: (60.591,62.851,44.288)
O2: (60.308,63.829,51.899)
C4': (61.826,65.118,47.243)
C2': (62.570,64.251,49.313)
O2': (63.262,65.370,49.823)
N1: (60.225,63.373,49.673)
N3: (59.075,62.056,51.272)
N4: (57.835,60.267,50.608)
C6: (59.773,62.567,48.667)
C5: (58.979,61.524,48.925)
O3': (64.080,64.308,47.379)
Image (generated by PyMOL):