Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A308:A122
Extra
PDB:
ATOM 1 O3' A A 307 -54.211 17.274 -73.777 1.00 21.62 O
ATOM 2 P G A 308 -53.258 16.212 -73.064 1.00 24.42 P
ATOM 3 OP1 G A 308 -52.234 15.806 -74.044 1.00 24.42 O
ATOM 4 OP2 G A 308 -54.139 15.180 -72.486 1.00 24.42 O
ATOM 5 O5' G A 308 -52.575 17.061 -71.912 1.00 24.42 O
ATOM 6 C5' G A 308 -51.489 17.913 -72.204 1.00 24.42 C
ATOM 7 C4' G A 308 -50.794 18.374 -70.951 1.00 24.42 C
ATOM 8 O4' G A 308 -51.741 19.013 -70.057 1.00 24.42 O
ATOM 9 C3' G A 308 -50.193 17.300 -70.079 1.00 24.42 C
ATOM 10 O3' G A 308 -49.005 16.757 -70.589 1.00 24.42 O
ATOM 11 C2' G A 308 -50.015 18.041 -68.777 1.00 24.42 C
ATOM 12 O2' G A 308 -48.961 18.983 -68.877 1.00 24.42 O
ATOM 13 C1' G A 308 -51.331 18.800 -68.719 1.00 24.42 C
ATOM 14 N9 G A 308 -52.368 18.019 -68.025 1.00 24.35 N
ATOM 15 C8 G A 308 -53.438 17.379 -68.578 1.00 24.35 C
ATOM 16 N7 G A 308 -54.152 16.765 -67.682 1.00 24.35 N
ATOM 17 C5 G A 308 -53.513 17.017 -66.482 1.00 24.35 C
ATOM 18 C6 G A 308 -53.824 16.608 -65.177 1.00 24.35 C
ATOM 19 O6 G A 308 -54.771 15.913 -64.832 1.00 24.35 O
ATOM 20 N1 G A 308 -52.925 17.059 -64.229 1.00 24.35 N
ATOM 21 C2 G A 308 -51.837 17.833 -64.519 1.00 24.35 C
ATOM 22 N2 G A 308 -51.058 18.204 -63.490 1.00 24.35 N
ATOM 23 N3 G A 308 -51.532 18.220 -65.742 1.00 24.35 N
ATOM 24 C4 G A 308 -52.408 17.781 -66.670 1.00 24.35 C
ATOM 25 P C A 309 -48.727 15.188 -70.399 1.00 11.78 P
ATOM 26 OP1 C A 309 -47.529 14.845 -71.236 1.00 11.78 O
ATOM 27 OP2 C A 309 -50.029 14.478 -70.670 1.00 11.78 O
ATOM 28 O5' C A 309 -48.357 15.093 -68.849 1.00 11.78 O
TER
ATOM 1 O3' U B 121 -48.721 18.277 -61.875 1.00 11.28 O
ATOM 2 P C B 122 -47.646 19.136 -62.693 1.00 26.56 P
ATOM 3 OP1 C B 122 -47.944 18.932 -64.138 1.00 26.56 O
ATOM 4 OP2 C B 122 -46.307 18.759 -62.182 1.00 26.56 O
ATOM 5 O5' C B 122 -47.994 20.636 -62.241 1.00 26.56 O
ATOM 6 C5' C B 122 -49.339 21.026 -61.966 1.00 26.56 C
ATOM 7 C4' C B 122 -49.423 22.261 -61.083 1.00 26.56 C
ATOM 8 O4' C B 122 -49.257 21.899 -59.698 1.00 26.56 O
ATOM 9 C3' C B 122 -48.381 23.345 -61.315 1.00 26.56 C
ATOM 10 O3' C B 122 -48.707 24.193 -62.410 1.00 26.56 O
ATOM 11 C2' C B 122 -48.338 24.065 -59.963 1.00 26.56 C
ATOM 12 O2' C B 122 -49.424 24.977 -59.815 1.00 26.56 O
ATOM 13 C1' C B 122 -48.557 22.910 -59.007 1.00 26.56 C
ATOM 14 N1 C B 122 -47.303 22.344 -58.543 1.00 26.24 N
ATOM 15 C2 C B 122 -46.627 22.940 -57.499 1.00 26.24 C
ATOM 16 O2 C B 122 -47.108 23.963 -57.019 1.00 26.24 O
ATOM 17 N3 C B 122 -45.486 22.386 -57.066 1.00 26.24 N
ATOM 18 C4 C B 122 -45.057 21.264 -57.656 1.00 26.24 C
ATOM 19 N4 C B 122 -43.923 20.702 -57.245 1.00 26.24 N
ATOM 20 C5 C B 122 -45.746 20.628 -58.717 1.00 26.24 C
ATOM 21 C6 C B 122 -46.868 21.201 -59.128 1.00 26.24 C
ATOM 22 P U B 123 -47.544 24.861 -63.296 1.00 34.31 P
ATOM 23 OP1 U B 123 -48.224 25.706 -64.327 1.00 34.31 O
ATOM 24 OP2 U B 123 -46.636 23.764 -63.752 1.00 34.31 O
ATOM 25 O5' U B 123 -46.790 25.778 -62.229 1.00 34.31 O
TER
ATOM 2 P G A 308 -53.258 16.212 -73.064 1.00 24.42 P
ATOM 3 OP1 G A 308 -52.234 15.806 -74.044 1.00 24.42 O
ATOM 4 OP2 G A 308 -54.139 15.180 -72.486 1.00 24.42 O
ATOM 5 O5' G A 308 -52.575 17.061 -71.912 1.00 24.42 O
ATOM 6 C5' G A 308 -51.489 17.913 -72.204 1.00 24.42 C
ATOM 7 C4' G A 308 -50.794 18.374 -70.951 1.00 24.42 C
ATOM 8 O4' G A 308 -51.741 19.013 -70.057 1.00 24.42 O
ATOM 9 C3' G A 308 -50.193 17.300 -70.079 1.00 24.42 C
ATOM 10 O3' G A 308 -49.005 16.757 -70.589 1.00 24.42 O
ATOM 11 C2' G A 308 -50.015 18.041 -68.777 1.00 24.42 C
ATOM 12 O2' G A 308 -48.961 18.983 -68.877 1.00 24.42 O
ATOM 13 C1' G A 308 -51.331 18.800 -68.719 1.00 24.42 C
ATOM 14 N9 G A 308 -52.368 18.019 -68.025 1.00 24.35 N
ATOM 15 C8 G A 308 -53.438 17.379 -68.578 1.00 24.35 C
ATOM 16 N7 G A 308 -54.152 16.765 -67.682 1.00 24.35 N
ATOM 17 C5 G A 308 -53.513 17.017 -66.482 1.00 24.35 C
ATOM 18 C6 G A 308 -53.824 16.608 -65.177 1.00 24.35 C
ATOM 19 O6 G A 308 -54.771 15.913 -64.832 1.00 24.35 O
ATOM 20 N1 G A 308 -52.925 17.059 -64.229 1.00 24.35 N
ATOM 21 C2 G A 308 -51.837 17.833 -64.519 1.00 24.35 C
ATOM 22 N2 G A 308 -51.058 18.204 -63.490 1.00 24.35 N
ATOM 23 N3 G A 308 -51.532 18.220 -65.742 1.00 24.35 N
ATOM 24 C4 G A 308 -52.408 17.781 -66.670 1.00 24.35 C
ATOM 25 P C A 309 -48.727 15.188 -70.399 1.00 11.78 P
ATOM 26 OP1 C A 309 -47.529 14.845 -71.236 1.00 11.78 O
ATOM 27 OP2 C A 309 -50.029 14.478 -70.670 1.00 11.78 O
ATOM 28 O5' C A 309 -48.357 15.093 -68.849 1.00 11.78 O
TER
ATOM 1 O3' U B 121 -48.721 18.277 -61.875 1.00 11.28 O
ATOM 2 P C B 122 -47.646 19.136 -62.693 1.00 26.56 P
ATOM 3 OP1 C B 122 -47.944 18.932 -64.138 1.00 26.56 O
ATOM 4 OP2 C B 122 -46.307 18.759 -62.182 1.00 26.56 O
ATOM 5 O5' C B 122 -47.994 20.636 -62.241 1.00 26.56 O
ATOM 6 C5' C B 122 -49.339 21.026 -61.966 1.00 26.56 C
ATOM 7 C4' C B 122 -49.423 22.261 -61.083 1.00 26.56 C
ATOM 8 O4' C B 122 -49.257 21.899 -59.698 1.00 26.56 O
ATOM 9 C3' C B 122 -48.381 23.345 -61.315 1.00 26.56 C
ATOM 10 O3' C B 122 -48.707 24.193 -62.410 1.00 26.56 O
ATOM 11 C2' C B 122 -48.338 24.065 -59.963 1.00 26.56 C
ATOM 12 O2' C B 122 -49.424 24.977 -59.815 1.00 26.56 O
ATOM 13 C1' C B 122 -48.557 22.910 -59.007 1.00 26.56 C
ATOM 14 N1 C B 122 -47.303 22.344 -58.543 1.00 26.24 N
ATOM 15 C2 C B 122 -46.627 22.940 -57.499 1.00 26.24 C
ATOM 16 O2 C B 122 -47.108 23.963 -57.019 1.00 26.24 O
ATOM 17 N3 C B 122 -45.486 22.386 -57.066 1.00 26.24 N
ATOM 18 C4 C B 122 -45.057 21.264 -57.656 1.00 26.24 C
ATOM 19 N4 C B 122 -43.923 20.702 -57.245 1.00 26.24 N
ATOM 20 C5 C B 122 -45.746 20.628 -58.717 1.00 26.24 C
ATOM 21 C6 C B 122 -46.868 21.201 -59.128 1.00 26.24 C
ATOM 22 P U B 123 -47.544 24.861 -63.296 1.00 34.31 P
ATOM 23 OP1 U B 123 -48.224 25.706 -64.327 1.00 34.31 O
ATOM 24 OP2 U B 123 -46.636 23.764 -63.752 1.00 34.31 O
ATOM 25 O5' U B 123 -46.790 25.778 -62.229 1.00 34.31 O
TER
Atoms:
OP1: (-52.234,15.806,-74.044)
OP2: (-54.139,15.180,-72.486)
C3': (-50.193,17.300,-70.079)
C1': (-51.331,18.800,-68.719)
C5': (-51.489,17.913,-72.204)
O6: (-54.771,15.913,-64.832)
O4': (-51.741,19.013,-70.057)
C8: (-53.438,17.379,-68.578)
C2: (-51.837,17.833,-64.519)
C6: (-53.824,16.608,-65.177)
C5: (-53.513,17.017,-66.482)
C4: (-52.408,17.781,-66.670)
P: (-53.258,16.212,-73.064)
C4': (-50.794,18.374,-70.951)
C2': (-50.015,18.041,-68.777)
O2': (-48.961,18.983,-68.877)
N1: (-52.925,17.059,-64.229)
N2: (-51.058,18.204,-63.490)
N3: (-51.532,18.220,-65.742)
N7: (-54.152,16.765,-67.682)
N9: (-52.368,18.019,-68.025)
O5': (-52.575,17.061,-71.912)
O3': (-49.005,16.757,-70.589)
OP2: (-54.139,15.180,-72.486)
C3': (-50.193,17.300,-70.079)
C1': (-51.331,18.800,-68.719)
C5': (-51.489,17.913,-72.204)
O6: (-54.771,15.913,-64.832)
O4': (-51.741,19.013,-70.057)
C8: (-53.438,17.379,-68.578)
C2: (-51.837,17.833,-64.519)
C6: (-53.824,16.608,-65.177)
C5: (-53.513,17.017,-66.482)
C4: (-52.408,17.781,-66.670)
P: (-53.258,16.212,-73.064)
C4': (-50.794,18.374,-70.951)
C2': (-50.015,18.041,-68.777)
O2': (-48.961,18.983,-68.877)
N1: (-52.925,17.059,-64.229)
N2: (-51.058,18.204,-63.490)
N3: (-51.532,18.220,-65.742)
N7: (-54.152,16.765,-67.682)
N9: (-52.368,18.019,-68.025)
O5': (-52.575,17.061,-71.912)
O3': (-49.005,16.757,-70.589)
C2: (-46.627,22.940,-57.499)
OP1: (-47.944,18.932,-64.138)
OP2: (-46.307,18.759,-62.182)
C4: (-45.057,21.264,-57.656)
O5': (-47.994,20.636,-62.241)
C3': (-48.381,23.345,-61.315)
C1': (-48.557,22.910,-59.007)
O4': (-49.257,21.899,-59.698)
C5': (-49.339,21.026,-61.966)
P: (-47.646,19.136,-62.693)
O2: (-47.108,23.963,-57.019)
C4': (-49.423,22.261,-61.083)
C2': (-48.338,24.065,-59.963)
O2': (-49.424,24.977,-59.815)
N1: (-47.303,22.344,-58.543)
N3: (-45.486,22.386,-57.066)
N4: (-43.923,20.702,-57.245)
C6: (-46.868,21.201,-59.128)
C5: (-45.746,20.628,-58.717)
O3': (-48.707,24.193,-62.410)
OP1: (-47.944,18.932,-64.138)
OP2: (-46.307,18.759,-62.182)
C4: (-45.057,21.264,-57.656)
O5': (-47.994,20.636,-62.241)
C3': (-48.381,23.345,-61.315)
C1': (-48.557,22.910,-59.007)
O4': (-49.257,21.899,-59.698)
C5': (-49.339,21.026,-61.966)
P: (-47.646,19.136,-62.693)
O2: (-47.108,23.963,-57.019)
C4': (-49.423,22.261,-61.083)
C2': (-48.338,24.065,-59.963)
O2': (-49.424,24.977,-59.815)
N1: (-47.303,22.344,-58.543)
N3: (-45.486,22.386,-57.066)
N4: (-43.923,20.702,-57.245)
C6: (-46.868,21.201,-59.128)
C5: (-45.746,20.628,-58.717)
O3': (-48.707,24.193,-62.410)
Image (generated by PyMOL):