ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ6:02047:0887

Extra

PDB:
ATOM 1 O3' A A2046 59.871 127.611 84.529 1.00 57.41 O
ATOM 2 P A A2047 58.392 127.274 83.992 1.00 51.56 P
ATOM 3 OP1 A A2047 58.447 127.480 82.523 1.00 55.78 O
ATOM 4 OP2 A A2047 57.380 128.006 84.793 1.00 53.49 O
ATOM 5 O5' A A2047 58.198 125.721 84.305 1.00 54.14 O
ATOM 6 C5' A A2047 59.039 124.727 83.695 1.00 51.83 C
ATOM 7 C4' A A2047 59.037 123.452 84.513 1.00 50.43 C
ATOM 8 O4' A A2047 57.800 122.696 84.305 1.00 50.10 O
ATOM 9 C3' A A2047 60.157 122.498 84.118 1.00 51.68 C
ATOM 10 O3' A A2047 60.571 121.761 85.259 1.00 56.41 O
ATOM 11 C2' A A2047 59.464 121.573 83.135 1.00 49.80 C
ATOM 12 O2' A A2047 60.120 120.346 82.898 1.00 47.02 O
ATOM 13 C1' A A2047 58.122 121.394 83.834 1.00 48.81 C
ATOM 14 N9 A A2047 57.097 120.894 82.915 1.00 47.63 N
ATOM 15 C8 A A2047 56.441 121.544 81.898 1.00 48.70 C
ATOM 16 N7 A A2047 55.680 120.758 81.174 1.00 48.46 N
ATOM 17 C5 A A2047 55.824 119.512 81.771 1.00 47.81 C
ATOM 18 C6 A A2047 55.304 118.244 81.458 1.00 46.90 C
ATOM 19 N6 A A2047 54.520 118.002 80.413 1.00 47.51 N
ATOM 20 N1 A A2047 55.636 117.213 82.261 1.00 46.93 N
ATOM 21 C2 A A2047 56.446 117.443 83.295 1.00 45.78 C
ATOM 22 N3 A A2047 57.011 118.580 83.683 1.00 47.89 N
ATOM 23 C4 A A2047 56.660 119.591 82.867 1.00 47.84 C
ATOM 24 P G A2048 62.131 121.496 85.508 1.00 57.72 P
ATOM 25 OP1 G A2048 62.785 122.824 85.642 1.00 63.44 O
ATOM 26 OP2 G A2048 62.636 120.538 84.492 1.00 58.78 O
ATOM 27 O5' G A2048 62.159 120.779 86.929 1.00 58.62 O
TER

ATOM 1 O3' C B 886 57.664 108.697 81.233 1.00 35.68 O
ATOM 2 P U B 887 56.088 108.505 81.425 1.00 33.68 P
ATOM 3 OP1 U B 887 55.898 108.003 82.812 1.00 36.00 O
ATOM 4 OP2 U B 887 55.544 107.731 80.288 1.00 35.98 O
ATOM 5 O5' U B 887 55.532 109.993 81.369 1.00 35.57 O
ATOM 6 C5' U B 887 55.784 110.877 82.462 1.00 34.88 C
ATOM 7 C4' U B 887 55.367 112.286 82.135 1.00 35.70 C
ATOM 8 O4' U B 887 56.136 112.798 81.017 1.00 35.84 O
ATOM 9 C3' U B 887 53.936 112.551 81.699 1.00 36.43 C
ATOM 10 O3' U B 887 53.009 112.521 82.777 1.00 37.15 O
ATOM 11 C2' U B 887 54.079 113.963 81.155 1.00 35.23 C
ATOM 12 O2' U B 887 54.254 114.899 82.195 1.00 36.53 O
ATOM 13 C1' U B 887 55.408 113.857 80.412 1.00 35.50 C
ATOM 14 N1 U B 887 55.195 113.580 78.979 1.00 36.16 N
ATOM 15 C2 U B 887 54.849 114.661 78.204 1.00 34.54 C
ATOM 16 O2 U B 887 54.726 115.779 78.667 1.00 37.74 O
ATOM 17 N3 U B 887 54.649 114.394 76.875 1.00 34.73 N
ATOM 18 C4 U B 887 54.743 113.174 76.248 1.00 36.64 C
ATOM 19 O4 U B 887 54.517 113.102 75.034 1.00 35.28 O
ATOM 20 C5 U B 887 55.109 112.083 77.114 1.00 35.71 C
ATOM 21 C6 U B 887 55.320 112.317 78.419 1.00 35.15 C
ATOM 22 P G B 888 51.442 112.332 82.471 1.00 36.57 P
ATOM 23 OP1 G B 888 50.696 112.511 83.750 1.00 35.48 O
ATOM 24 OP2 G B 888 51.291 111.084 81.705 1.00 37.92 O
ATOM 25 O5' G B 888 51.078 113.538 81.493 1.00 37.44 O
TER

Atoms:
OP1: (58.447,127.480,82.523)
OP2: (57.380,128.006,84.793)
C3': (60.157,122.498,84.118)
C1': (58.122,121.394,83.834)
C5': (59.039,124.727,83.695)
O4': (57.800,122.696,84.305)
C8: (56.441,121.544,81.898)
O2': (60.120,120.346,82.898)
C6: (55.304,118.244,81.458)
C5: (55.824,119.512,81.771)
C4: (56.660,119.591,82.867)
P: (58.392,127.274,83.992)
C4': (59.037,123.452,84.513)
C2': (59.464,121.573,83.135)
C2: (56.446,117.443,83.295)
N1: (55.636,117.213,82.261)
N3: (57.011,118.580,83.683)
N6: (54.520,118.002,80.413)
N7: (55.680,120.758,81.174)
N9: (57.097,120.894,82.915)
O5': (58.198,125.721,84.305)
O3': (60.571,121.761,85.259)
C4: (54.743,113.174,76.248)
N3: (54.649,114.394,76.875)
OP1: (55.898,108.003,82.812)
OP2: (55.544,107.731,80.288)
C2: (54.849,114.661,78.204)
C1': (55.408,113.857,80.412)
C3': (53.936,112.551,81.699)
O5': (55.532,109.993,81.369)
O4': (56.136,112.798,81.017)
C5': (55.784,110.877,82.462)
P: (56.088,108.505,81.425)
C4': (55.367,112.286,82.135)
C2': (54.079,113.963,81.155)
O2': (54.254,114.899,82.195)
N1: (55.195,113.580,78.979)
O4: (54.517,113.102,75.034)
O2: (54.726,115.779,78.667)
C6: (55.320,112.317,78.419)
C5: (55.109,112.083,77.114)
O3': (53.009,112.521,82.777)
Image (generated by PyMOL):
PyMOL image
show in jmol