Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:137:139
Extra
PDB:
ATOM 1 O3' A A 36 41.420 -31.549 81.161 1.00 34.92 O
ATOM 2 P A A 37 40.196 -31.853 80.185 1.00 31.53 P
ATOM 3 OP1 A A 37 39.079 -32.224 81.045 1.00 31.65 O
ATOM 4 OP2 A A 37 40.693 -32.827 79.133 1.00 31.59 O
ATOM 5 O5' A A 37 39.945 -30.432 79.550 1.00 31.29 O
ATOM 6 C5' A A 37 40.864 -29.875 78.649 1.00 31.15 C
ATOM 7 C4' A A 37 41.088 -28.437 78.950 1.00 31.00 C
ATOM 8 O4' A A 37 41.952 -27.869 77.943 1.00 30.87 O
ATOM 9 C3' A A 37 39.835 -27.567 78.976 1.00 30.89 C
ATOM 10 O3' A A 37 39.857 -26.732 80.127 1.00 30.89 O
ATOM 11 C2' A A 37 40.000 -26.701 77.726 1.00 30.71 C
ATOM 12 O2' A A 37 39.404 -25.412 77.779 1.00 30.57 O
ATOM 13 C1' A A 37 41.491 -26.608 77.612 1.00 30.70 C
ATOM 14 N9 A A 37 41.947 -26.298 76.278 1.00 30.58 N
ATOM 15 C8 A A 37 42.791 -25.278 76.023 1.00 30.47 C
ATOM 16 N7 A A 37 43.058 -25.135 74.778 1.00 30.39 N
ATOM 17 C5 A A 37 42.370 -26.156 74.138 1.00 30.45 C
ATOM 18 C6 A A 37 42.304 -26.529 72.774 1.00 30.43 C
ATOM 19 N6 A A 37 42.971 -25.871 71.801 1.00 30.33 N
ATOM 20 N1 A A 37 41.465 -27.550 72.461 1.00 30.53 N
ATOM 21 C2 A A 37 40.836 -28.173 73.459 1.00 30.64 C
ATOM 22 N3 A A 37 40.843 -27.934 74.761 1.00 30.67 N
ATOM 23 C4 A A 37 41.629 -26.879 75.056 1.00 30.57 C
ATOM 24 P G A 38 38.678 -26.830 81.216 1.00 36.19 P
ATOM 25 OP1 G A 38 38.934 -25.784 82.187 1.00 36.18 O
ATOM 26 OP2 G A 38 38.632 -28.223 81.692 1.00 36.39 O
ATOM 27 O5' G A 38 37.369 -26.458 80.365 1.00 36.08 O
TER
ATOM 1 O3' G B 38 34.956 -24.013 82.400 1.00 36.06 O
ATOM 2 P C B 39 35.707 -24.249 83.788 1.00 39.61 P
ATOM 3 OP1 C B 39 36.436 -23.048 84.098 1.00 39.53 O
ATOM 4 OP2 C B 39 36.461 -25.447 83.620 1.00 39.70 O
ATOM 5 O5' C B 39 34.558 -24.502 84.858 1.00 39.77 O
ATOM 6 C5' C B 39 33.170 -24.431 84.534 1.00 39.75 C
ATOM 7 C4' C B 39 32.392 -25.559 85.159 1.00 39.94 C
ATOM 8 O4' C B 39 32.386 -26.675 84.251 1.00 39.96 O
ATOM 9 C3' C B 39 32.950 -26.129 86.448 1.00 40.13 C
ATOM 10 O3' C B 39 32.573 -25.382 87.581 1.00 40.21 O
ATOM 11 C2' C B 39 32.433 -27.565 86.449 1.00 40.30 C
ATOM 12 O2' C B 39 31.089 -27.641 86.934 1.00 40.40 O
ATOM 13 C1' C B 39 32.437 -27.890 84.953 1.00 40.16 C
ATOM 14 N1 C B 39 33.669 -28.614 84.527 1.00 40.17 N
ATOM 15 C2 C B 39 33.800 -29.946 84.880 1.00 40.36 C
ATOM 16 O2 C B 39 32.917 -30.437 85.545 1.00 40.51 O
ATOM 17 N3 C B 39 34.887 -30.644 84.527 1.00 40.39 N
ATOM 18 C4 C B 39 35.841 -30.035 83.809 1.00 40.23 C
ATOM 19 N4 C B 39 36.875 -30.798 83.479 1.00 40.29 N
ATOM 20 C5 C B 39 35.778 -28.657 83.402 1.00 40.02 C
ATOM 21 C6 C B 39 34.673 -27.986 83.784 1.00 40.00 C
ATOM 22 P A B 40 33.348 -25.547 88.982 1.00 41.54 P
ATOM 23 OP1 A B 40 33.149 -24.295 89.771 1.00 41.54 O
ATOM 24 OP2 A B 40 34.719 -25.996 88.686 1.00 41.52 O
ATOM 25 O5' A B 40 32.558 -26.725 89.640 1.00 41.76 O
TER
ATOM 2 P A A 37 40.196 -31.853 80.185 1.00 31.53 P
ATOM 3 OP1 A A 37 39.079 -32.224 81.045 1.00 31.65 O
ATOM 4 OP2 A A 37 40.693 -32.827 79.133 1.00 31.59 O
ATOM 5 O5' A A 37 39.945 -30.432 79.550 1.00 31.29 O
ATOM 6 C5' A A 37 40.864 -29.875 78.649 1.00 31.15 C
ATOM 7 C4' A A 37 41.088 -28.437 78.950 1.00 31.00 C
ATOM 8 O4' A A 37 41.952 -27.869 77.943 1.00 30.87 O
ATOM 9 C3' A A 37 39.835 -27.567 78.976 1.00 30.89 C
ATOM 10 O3' A A 37 39.857 -26.732 80.127 1.00 30.89 O
ATOM 11 C2' A A 37 40.000 -26.701 77.726 1.00 30.71 C
ATOM 12 O2' A A 37 39.404 -25.412 77.779 1.00 30.57 O
ATOM 13 C1' A A 37 41.491 -26.608 77.612 1.00 30.70 C
ATOM 14 N9 A A 37 41.947 -26.298 76.278 1.00 30.58 N
ATOM 15 C8 A A 37 42.791 -25.278 76.023 1.00 30.47 C
ATOM 16 N7 A A 37 43.058 -25.135 74.778 1.00 30.39 N
ATOM 17 C5 A A 37 42.370 -26.156 74.138 1.00 30.45 C
ATOM 18 C6 A A 37 42.304 -26.529 72.774 1.00 30.43 C
ATOM 19 N6 A A 37 42.971 -25.871 71.801 1.00 30.33 N
ATOM 20 N1 A A 37 41.465 -27.550 72.461 1.00 30.53 N
ATOM 21 C2 A A 37 40.836 -28.173 73.459 1.00 30.64 C
ATOM 22 N3 A A 37 40.843 -27.934 74.761 1.00 30.67 N
ATOM 23 C4 A A 37 41.629 -26.879 75.056 1.00 30.57 C
ATOM 24 P G A 38 38.678 -26.830 81.216 1.00 36.19 P
ATOM 25 OP1 G A 38 38.934 -25.784 82.187 1.00 36.18 O
ATOM 26 OP2 G A 38 38.632 -28.223 81.692 1.00 36.39 O
ATOM 27 O5' G A 38 37.369 -26.458 80.365 1.00 36.08 O
TER
ATOM 1 O3' G B 38 34.956 -24.013 82.400 1.00 36.06 O
ATOM 2 P C B 39 35.707 -24.249 83.788 1.00 39.61 P
ATOM 3 OP1 C B 39 36.436 -23.048 84.098 1.00 39.53 O
ATOM 4 OP2 C B 39 36.461 -25.447 83.620 1.00 39.70 O
ATOM 5 O5' C B 39 34.558 -24.502 84.858 1.00 39.77 O
ATOM 6 C5' C B 39 33.170 -24.431 84.534 1.00 39.75 C
ATOM 7 C4' C B 39 32.392 -25.559 85.159 1.00 39.94 C
ATOM 8 O4' C B 39 32.386 -26.675 84.251 1.00 39.96 O
ATOM 9 C3' C B 39 32.950 -26.129 86.448 1.00 40.13 C
ATOM 10 O3' C B 39 32.573 -25.382 87.581 1.00 40.21 O
ATOM 11 C2' C B 39 32.433 -27.565 86.449 1.00 40.30 C
ATOM 12 O2' C B 39 31.089 -27.641 86.934 1.00 40.40 O
ATOM 13 C1' C B 39 32.437 -27.890 84.953 1.00 40.16 C
ATOM 14 N1 C B 39 33.669 -28.614 84.527 1.00 40.17 N
ATOM 15 C2 C B 39 33.800 -29.946 84.880 1.00 40.36 C
ATOM 16 O2 C B 39 32.917 -30.437 85.545 1.00 40.51 O
ATOM 17 N3 C B 39 34.887 -30.644 84.527 1.00 40.39 N
ATOM 18 C4 C B 39 35.841 -30.035 83.809 1.00 40.23 C
ATOM 19 N4 C B 39 36.875 -30.798 83.479 1.00 40.29 N
ATOM 20 C5 C B 39 35.778 -28.657 83.402 1.00 40.02 C
ATOM 21 C6 C B 39 34.673 -27.986 83.784 1.00 40.00 C
ATOM 22 P A B 40 33.348 -25.547 88.982 1.00 41.54 P
ATOM 23 OP1 A B 40 33.149 -24.295 89.771 1.00 41.54 O
ATOM 24 OP2 A B 40 34.719 -25.996 88.686 1.00 41.52 O
ATOM 25 O5' A B 40 32.558 -26.725 89.640 1.00 41.76 O
TER
Atoms:
OP1: (39.079,-32.224,81.045)
OP2: (40.693,-32.827,79.133)
C3': (39.835,-27.567,78.976)
C1': (41.491,-26.608,77.612)
C5': (40.864,-29.875,78.649)
O4': (41.952,-27.869,77.943)
C8: (42.791,-25.278,76.023)
O2': (39.404,-25.412,77.779)
C6: (42.304,-26.529,72.774)
C5: (42.370,-26.156,74.138)
C4: (41.629,-26.879,75.056)
P: (40.196,-31.853,80.185)
C4': (41.088,-28.437,78.950)
C2': (40.000,-26.701,77.726)
C2: (40.836,-28.173,73.459)
N1: (41.465,-27.550,72.461)
N3: (40.843,-27.934,74.761)
N6: (42.971,-25.871,71.801)
N7: (43.058,-25.135,74.778)
N9: (41.947,-26.298,76.278)
O5': (39.945,-30.432,79.550)
O3': (39.857,-26.732,80.127)
OP2: (40.693,-32.827,79.133)
C3': (39.835,-27.567,78.976)
C1': (41.491,-26.608,77.612)
C5': (40.864,-29.875,78.649)
O4': (41.952,-27.869,77.943)
C8: (42.791,-25.278,76.023)
O2': (39.404,-25.412,77.779)
C6: (42.304,-26.529,72.774)
C5: (42.370,-26.156,74.138)
C4: (41.629,-26.879,75.056)
P: (40.196,-31.853,80.185)
C4': (41.088,-28.437,78.950)
C2': (40.000,-26.701,77.726)
C2: (40.836,-28.173,73.459)
N1: (41.465,-27.550,72.461)
N3: (40.843,-27.934,74.761)
N6: (42.971,-25.871,71.801)
N7: (43.058,-25.135,74.778)
N9: (41.947,-26.298,76.278)
O5': (39.945,-30.432,79.550)
O3': (39.857,-26.732,80.127)
C2: (33.800,-29.946,84.880)
OP1: (36.436,-23.048,84.098)
OP2: (36.461,-25.447,83.620)
C4: (35.841,-30.035,83.809)
O5': (34.558,-24.502,84.858)
C3': (32.950,-26.129,86.448)
C1': (32.437,-27.890,84.953)
O4': (32.386,-26.675,84.251)
C5': (33.170,-24.431,84.534)
P: (35.707,-24.249,83.788)
O2: (32.917,-30.437,85.545)
C4': (32.392,-25.559,85.159)
C2': (32.433,-27.565,86.449)
O2': (31.089,-27.641,86.934)
N1: (33.669,-28.614,84.527)
N3: (34.887,-30.644,84.527)
N4: (36.875,-30.798,83.479)
C6: (34.673,-27.986,83.784)
C5: (35.778,-28.657,83.402)
O3': (32.573,-25.382,87.581)
OP1: (36.436,-23.048,84.098)
OP2: (36.461,-25.447,83.620)
C4: (35.841,-30.035,83.809)
O5': (34.558,-24.502,84.858)
C3': (32.950,-26.129,86.448)
C1': (32.437,-27.890,84.953)
O4': (32.386,-26.675,84.251)
C5': (33.170,-24.431,84.534)
P: (35.707,-24.249,83.788)
O2: (32.917,-30.437,85.545)
C4': (32.392,-25.559,85.159)
C2': (32.433,-27.565,86.449)
O2': (31.089,-27.641,86.934)
N1: (33.669,-28.614,84.527)
N3: (34.887,-30.644,84.527)
N4: (36.875,-30.798,83.479)
C6: (34.673,-27.986,83.784)
C5: (35.778,-28.657,83.402)
O3': (32.573,-25.382,87.581)
Image (generated by PyMOL):