Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01815:02092
Extra
PDB:
ATOM 1 O3' C A1814 118.895 127.955 52.745 1.00 47.97 O
ATOM 2 P A A1815 119.319 127.589 51.240 1.00 51.00 P
ATOM 3 OP1 A A1815 120.609 126.848 51.270 1.00 47.09 O
ATOM 4 OP2 A A1815 119.204 128.846 50.447 1.00 50.79 O
ATOM 5 O5' A A1815 118.219 126.542 50.753 1.00 51.61 O
ATOM 6 C5' A A1815 116.816 126.870 50.747 1.00 52.72 C
ATOM 7 C4' A A1815 115.983 125.610 50.606 1.00 54.16 C
ATOM 8 O4' A A1815 116.186 125.023 49.288 1.00 55.19 O
ATOM 9 C3' A A1815 116.284 124.498 51.609 1.00 53.44 C
ATOM 10 O3' A A1815 115.091 123.766 51.855 1.00 52.15 O
ATOM 11 C2' A A1815 117.231 123.602 50.820 1.00 54.72 C
ATOM 12 O2' A A1815 117.273 122.275 51.302 1.00 51.01 O
ATOM 13 C1' A A1815 116.593 123.679 49.434 1.00 57.01 C
ATOM 14 N9 A A1815 117.439 123.315 48.296 1.00 61.76 N
ATOM 15 C8 A A1815 118.808 123.394 48.167 1.00 63.68 C
ATOM 16 N7 A A1815 119.255 122.970 47.007 1.00 64.92 N
ATOM 17 C5 A A1815 118.105 122.590 46.325 1.00 64.95 C
ATOM 18 C6 A A1815 117.896 122.054 45.034 1.00 66.11 C
ATOM 19 N6 A A1815 118.879 121.796 44.166 1.00 65.90 N
ATOM 20 N1 A A1815 116.624 121.789 44.664 1.00 65.54 N
ATOM 21 C2 A A1815 115.638 122.048 45.532 1.00 64.84 C
ATOM 22 N3 A A1815 115.706 122.548 46.765 1.00 63.78 N
ATOM 23 C4 A A1815 116.981 122.801 47.106 1.00 63.23 C
ATOM 24 P A A1816 114.192 124.105 53.137 1.00 51.42 P
ATOM 25 OP1 A A1816 113.080 123.124 53.160 1.00 52.72 O
ATOM 26 OP2 A A1816 113.886 125.563 53.108 1.00 51.59 O
ATOM 27 O5' A A1816 115.143 123.816 54.386 1.00 48.28 O
TER
ATOM 1 O3' C B2091 111.344 119.671 36.485 1.00 55.35 O
ATOM 2 P U B2092 111.588 121.219 36.830 1.00 56.86 P
ATOM 3 OP1 U B2092 110.272 121.815 37.175 1.00 55.44 O
ATOM 4 OP2 U B2092 112.414 121.833 35.757 1.00 56.74 O
ATOM 5 O5' U B2092 112.490 121.179 38.138 1.00 57.27 O
ATOM 6 C5' U B2092 111.959 120.718 39.385 1.00 59.08 C
ATOM 7 C4' U B2092 113.003 120.832 40.466 1.00 62.24 C
ATOM 8 O4' U B2092 114.125 119.969 40.156 1.00 63.62 O
ATOM 9 C3' U B2092 113.636 122.200 40.631 1.00 63.11 C
ATOM 10 O3' U B2092 112.806 123.049 41.403 1.00 66.77 O
ATOM 11 C2' U B2092 114.941 121.864 41.336 1.00 63.59 C
ATOM 12 O2' U B2092 114.767 121.607 42.712 1.00 62.15 O
ATOM 13 C1' U B2092 115.320 120.550 40.650 1.00 64.75 C
ATOM 14 N1 U B2092 116.272 120.707 39.539 1.00 67.11 N
ATOM 15 C2 U B2092 117.623 120.643 39.839 1.00 68.89 C
ATOM 16 O2 U B2092 118.047 120.464 40.973 1.00 69.31 O
ATOM 17 N3 U B2092 118.462 120.794 38.762 1.00 70.87 N
ATOM 18 C4 U B2092 118.100 120.996 37.444 1.00 70.17 C
ATOM 19 O4 U B2092 118.978 121.117 36.586 1.00 70.72 O
ATOM 20 C5 U B2092 116.689 121.048 37.215 1.00 68.91 C
ATOM 21 C6 U B2092 115.845 120.908 38.242 1.00 67.82 C
ATOM 22 P C B2093 112.806 124.629 41.125 1.00 71.99 P
ATOM 23 OP1 C B2093 111.619 125.189 41.833 1.00 71.70 O
ATOM 24 OP2 C B2093 112.946 124.840 39.660 1.00 72.63 O
ATOM 25 O5' C B2093 114.142 125.144 41.837 1.00 71.60 O
TER
ATOM 2 P A A1815 119.319 127.589 51.240 1.00 51.00 P
ATOM 3 OP1 A A1815 120.609 126.848 51.270 1.00 47.09 O
ATOM 4 OP2 A A1815 119.204 128.846 50.447 1.00 50.79 O
ATOM 5 O5' A A1815 118.219 126.542 50.753 1.00 51.61 O
ATOM 6 C5' A A1815 116.816 126.870 50.747 1.00 52.72 C
ATOM 7 C4' A A1815 115.983 125.610 50.606 1.00 54.16 C
ATOM 8 O4' A A1815 116.186 125.023 49.288 1.00 55.19 O
ATOM 9 C3' A A1815 116.284 124.498 51.609 1.00 53.44 C
ATOM 10 O3' A A1815 115.091 123.766 51.855 1.00 52.15 O
ATOM 11 C2' A A1815 117.231 123.602 50.820 1.00 54.72 C
ATOM 12 O2' A A1815 117.273 122.275 51.302 1.00 51.01 O
ATOM 13 C1' A A1815 116.593 123.679 49.434 1.00 57.01 C
ATOM 14 N9 A A1815 117.439 123.315 48.296 1.00 61.76 N
ATOM 15 C8 A A1815 118.808 123.394 48.167 1.00 63.68 C
ATOM 16 N7 A A1815 119.255 122.970 47.007 1.00 64.92 N
ATOM 17 C5 A A1815 118.105 122.590 46.325 1.00 64.95 C
ATOM 18 C6 A A1815 117.896 122.054 45.034 1.00 66.11 C
ATOM 19 N6 A A1815 118.879 121.796 44.166 1.00 65.90 N
ATOM 20 N1 A A1815 116.624 121.789 44.664 1.00 65.54 N
ATOM 21 C2 A A1815 115.638 122.048 45.532 1.00 64.84 C
ATOM 22 N3 A A1815 115.706 122.548 46.765 1.00 63.78 N
ATOM 23 C4 A A1815 116.981 122.801 47.106 1.00 63.23 C
ATOM 24 P A A1816 114.192 124.105 53.137 1.00 51.42 P
ATOM 25 OP1 A A1816 113.080 123.124 53.160 1.00 52.72 O
ATOM 26 OP2 A A1816 113.886 125.563 53.108 1.00 51.59 O
ATOM 27 O5' A A1816 115.143 123.816 54.386 1.00 48.28 O
TER
ATOM 1 O3' C B2091 111.344 119.671 36.485 1.00 55.35 O
ATOM 2 P U B2092 111.588 121.219 36.830 1.00 56.86 P
ATOM 3 OP1 U B2092 110.272 121.815 37.175 1.00 55.44 O
ATOM 4 OP2 U B2092 112.414 121.833 35.757 1.00 56.74 O
ATOM 5 O5' U B2092 112.490 121.179 38.138 1.00 57.27 O
ATOM 6 C5' U B2092 111.959 120.718 39.385 1.00 59.08 C
ATOM 7 C4' U B2092 113.003 120.832 40.466 1.00 62.24 C
ATOM 8 O4' U B2092 114.125 119.969 40.156 1.00 63.62 O
ATOM 9 C3' U B2092 113.636 122.200 40.631 1.00 63.11 C
ATOM 10 O3' U B2092 112.806 123.049 41.403 1.00 66.77 O
ATOM 11 C2' U B2092 114.941 121.864 41.336 1.00 63.59 C
ATOM 12 O2' U B2092 114.767 121.607 42.712 1.00 62.15 O
ATOM 13 C1' U B2092 115.320 120.550 40.650 1.00 64.75 C
ATOM 14 N1 U B2092 116.272 120.707 39.539 1.00 67.11 N
ATOM 15 C2 U B2092 117.623 120.643 39.839 1.00 68.89 C
ATOM 16 O2 U B2092 118.047 120.464 40.973 1.00 69.31 O
ATOM 17 N3 U B2092 118.462 120.794 38.762 1.00 70.87 N
ATOM 18 C4 U B2092 118.100 120.996 37.444 1.00 70.17 C
ATOM 19 O4 U B2092 118.978 121.117 36.586 1.00 70.72 O
ATOM 20 C5 U B2092 116.689 121.048 37.215 1.00 68.91 C
ATOM 21 C6 U B2092 115.845 120.908 38.242 1.00 67.82 C
ATOM 22 P C B2093 112.806 124.629 41.125 1.00 71.99 P
ATOM 23 OP1 C B2093 111.619 125.189 41.833 1.00 71.70 O
ATOM 24 OP2 C B2093 112.946 124.840 39.660 1.00 72.63 O
ATOM 25 O5' C B2093 114.142 125.144 41.837 1.00 71.60 O
TER
Atoms:
OP1: (120.609,126.848,51.270)
OP2: (119.204,128.846,50.447)
C3': (116.284,124.498,51.609)
C1': (116.593,123.679,49.434)
C5': (116.816,126.870,50.747)
O4': (116.186,125.023,49.288)
C8: (118.808,123.394,48.167)
O2': (117.273,122.275,51.302)
C6: (117.896,122.054,45.034)
C5: (118.105,122.590,46.325)
C4: (116.981,122.801,47.106)
P: (119.319,127.589,51.240)
C4': (115.983,125.610,50.606)
C2': (117.231,123.602,50.820)
C2: (115.638,122.048,45.532)
N1: (116.624,121.789,44.664)
N3: (115.706,122.548,46.765)
N6: (118.879,121.796,44.166)
N7: (119.255,122.970,47.007)
N9: (117.439,123.315,48.296)
O5': (118.219,126.542,50.753)
O3': (115.091,123.766,51.855)
OP2: (119.204,128.846,50.447)
C3': (116.284,124.498,51.609)
C1': (116.593,123.679,49.434)
C5': (116.816,126.870,50.747)
O4': (116.186,125.023,49.288)
C8: (118.808,123.394,48.167)
O2': (117.273,122.275,51.302)
C6: (117.896,122.054,45.034)
C5: (118.105,122.590,46.325)
C4: (116.981,122.801,47.106)
P: (119.319,127.589,51.240)
C4': (115.983,125.610,50.606)
C2': (117.231,123.602,50.820)
C2: (115.638,122.048,45.532)
N1: (116.624,121.789,44.664)
N3: (115.706,122.548,46.765)
N6: (118.879,121.796,44.166)
N7: (119.255,122.970,47.007)
N9: (117.439,123.315,48.296)
O5': (118.219,126.542,50.753)
O3': (115.091,123.766,51.855)
C4: (118.100,120.996,37.444)
N3: (118.462,120.794,38.762)
OP1: (110.272,121.815,37.175)
OP2: (112.414,121.833,35.757)
C2: (117.623,120.643,39.839)
C1': (115.320,120.550,40.650)
C3': (113.636,122.200,40.631)
O5': (112.490,121.179,38.138)
O4': (114.125,119.969,40.156)
C5': (111.959,120.718,39.385)
P: (111.588,121.219,36.830)
C4': (113.003,120.832,40.466)
C2': (114.941,121.864,41.336)
O2': (114.767,121.607,42.712)
N1: (116.272,120.707,39.539)
O4: (118.978,121.117,36.586)
O2: (118.047,120.464,40.973)
C6: (115.845,120.908,38.242)
C5: (116.689,121.048,37.215)
O3': (112.806,123.049,41.403)
N3: (118.462,120.794,38.762)
OP1: (110.272,121.815,37.175)
OP2: (112.414,121.833,35.757)
C2: (117.623,120.643,39.839)
C1': (115.320,120.550,40.650)
C3': (113.636,122.200,40.631)
O5': (112.490,121.179,38.138)
O4': (114.125,119.969,40.156)
C5': (111.959,120.718,39.385)
P: (111.588,121.219,36.830)
C4': (113.003,120.832,40.466)
C2': (114.941,121.864,41.336)
O2': (114.767,121.607,42.712)
N1: (116.272,120.707,39.539)
O4: (118.978,121.117,36.586)
O2: (118.047,120.464,40.973)
C6: (115.845,120.908,38.242)
C5: (116.689,121.048,37.215)
O3': (112.806,123.049,41.403)
Image (generated by PyMOL):