Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02047:0887
Extra
PDB:
ATOM 1 O3' A A2046 59.932 127.893 84.475 1.00 42.12 O
ATOM 2 P A A2047 58.482 127.449 83.922 1.00 37.27 P
ATOM 3 OP1 A A2047 58.533 127.701 82.459 1.00 38.83 O
ATOM 4 OP2 A A2047 57.402 128.070 84.724 1.00 37.89 O
ATOM 5 O5' A A2047 58.412 125.878 84.199 1.00 39.84 O
ATOM 6 C5' A A2047 59.403 124.969 83.664 1.00 39.33 C
ATOM 7 C4' A A2047 59.405 123.661 84.440 1.00 38.54 C
ATOM 8 O4' A A2047 58.175 122.911 84.175 1.00 37.43 O
ATOM 9 C3' A A2047 60.547 122.706 84.084 1.00 38.24 C
ATOM 10 O3' A A2047 60.948 121.975 85.242 1.00 40.59 O
ATOM 11 C2' A A2047 59.879 121.770 83.088 1.00 37.60 C
ATOM 12 O2' A A2047 60.513 120.524 82.872 1.00 35.44 O
ATOM 13 C1' A A2047 58.515 121.605 83.744 1.00 36.73 C
ATOM 14 N9 A A2047 57.515 121.093 82.810 1.00 36.87 N
ATOM 15 C8 A A2047 56.909 121.723 81.748 1.00 37.09 C
ATOM 16 N7 A A2047 56.122 120.940 81.050 1.00 36.85 N
ATOM 17 C5 A A2047 56.199 119.719 81.707 1.00 36.48 C
ATOM 18 C6 A A2047 55.618 118.464 81.448 1.00 35.18 C
ATOM 19 N6 A A2047 54.840 118.209 80.401 1.00 32.18 N
ATOM 20 N1 A A2047 55.889 117.459 82.309 1.00 35.47 N
ATOM 21 C2 A A2047 56.711 117.696 83.335 1.00 33.76 C
ATOM 22 N3 A A2047 57.336 118.818 83.669 1.00 36.66 N
ATOM 23 C4 A A2047 57.033 119.806 82.806 1.00 36.31 C
ATOM 24 P G A2048 62.479 121.519 85.410 1.00 42.67 P
ATOM 25 OP1 G A2048 63.319 122.738 85.306 1.00 50.66 O
ATOM 26 OP2 G A2048 62.763 120.372 84.521 1.00 42.84 O
ATOM 27 O5' G A2048 62.556 120.992 86.912 1.00 46.12 O
TER
ATOM 1 O3' C B 886 57.841 108.803 81.246 1.00 26.81 O
ATOM 2 P U B 887 56.259 108.627 81.446 1.00 26.50 P
ATOM 3 OP1 U B 887 56.079 108.158 82.841 1.00 26.83 O
ATOM 4 OP2 U B 887 55.719 107.823 80.323 1.00 27.15 O
ATOM 5 O5' U B 887 55.686 110.111 81.375 1.00 26.18 O
ATOM 6 C5' U B 887 55.924 111.007 82.462 1.00 26.34 C
ATOM 7 C4' U B 887 55.576 112.429 82.100 1.00 25.70 C
ATOM 8 O4' U B 887 56.366 112.893 80.975 1.00 27.06 O
ATOM 9 C3' U B 887 54.164 112.754 81.660 1.00 24.12 C
ATOM 10 O3' U B 887 53.239 112.762 82.743 1.00 26.48 O
ATOM 11 C2' U B 887 54.370 114.158 81.109 1.00 23.67 C
ATOM 12 O2' U B 887 54.555 115.114 82.126 1.00 21.26 O
ATOM 13 C1' U B 887 55.703 114.000 80.380 1.00 24.10 C
ATOM 14 N1 U B 887 55.483 113.756 78.941 1.00 26.81 N
ATOM 15 C2 U B 887 55.110 114.853 78.177 1.00 26.18 C
ATOM 16 O2 U B 887 55.009 115.977 78.638 1.00 28.83 O
ATOM 17 N3 U B 887 54.854 114.591 76.861 1.00 26.19 N
ATOM 18 C4 U B 887 54.933 113.382 76.225 1.00 28.07 C
ATOM 19 O4 U B 887 54.548 113.302 75.056 1.00 28.15 O
ATOM 20 C5 U B 887 55.359 112.289 77.062 1.00 28.26 C
ATOM 21 C6 U B 887 55.611 112.508 78.361 1.00 25.60 C
ATOM 22 P G B 888 51.675 112.507 82.457 1.00 26.69 P
ATOM 23 OP1 G B 888 50.942 112.688 83.741 1.00 26.83 O
ATOM 24 OP2 G B 888 51.560 111.233 81.724 1.00 25.04 O
ATOM 25 O5' G B 888 51.261 113.696 81.482 1.00 23.55 O
TER
ATOM 2 P A A2047 58.482 127.449 83.922 1.00 37.27 P
ATOM 3 OP1 A A2047 58.533 127.701 82.459 1.00 38.83 O
ATOM 4 OP2 A A2047 57.402 128.070 84.724 1.00 37.89 O
ATOM 5 O5' A A2047 58.412 125.878 84.199 1.00 39.84 O
ATOM 6 C5' A A2047 59.403 124.969 83.664 1.00 39.33 C
ATOM 7 C4' A A2047 59.405 123.661 84.440 1.00 38.54 C
ATOM 8 O4' A A2047 58.175 122.911 84.175 1.00 37.43 O
ATOM 9 C3' A A2047 60.547 122.706 84.084 1.00 38.24 C
ATOM 10 O3' A A2047 60.948 121.975 85.242 1.00 40.59 O
ATOM 11 C2' A A2047 59.879 121.770 83.088 1.00 37.60 C
ATOM 12 O2' A A2047 60.513 120.524 82.872 1.00 35.44 O
ATOM 13 C1' A A2047 58.515 121.605 83.744 1.00 36.73 C
ATOM 14 N9 A A2047 57.515 121.093 82.810 1.00 36.87 N
ATOM 15 C8 A A2047 56.909 121.723 81.748 1.00 37.09 C
ATOM 16 N7 A A2047 56.122 120.940 81.050 1.00 36.85 N
ATOM 17 C5 A A2047 56.199 119.719 81.707 1.00 36.48 C
ATOM 18 C6 A A2047 55.618 118.464 81.448 1.00 35.18 C
ATOM 19 N6 A A2047 54.840 118.209 80.401 1.00 32.18 N
ATOM 20 N1 A A2047 55.889 117.459 82.309 1.00 35.47 N
ATOM 21 C2 A A2047 56.711 117.696 83.335 1.00 33.76 C
ATOM 22 N3 A A2047 57.336 118.818 83.669 1.00 36.66 N
ATOM 23 C4 A A2047 57.033 119.806 82.806 1.00 36.31 C
ATOM 24 P G A2048 62.479 121.519 85.410 1.00 42.67 P
ATOM 25 OP1 G A2048 63.319 122.738 85.306 1.00 50.66 O
ATOM 26 OP2 G A2048 62.763 120.372 84.521 1.00 42.84 O
ATOM 27 O5' G A2048 62.556 120.992 86.912 1.00 46.12 O
TER
ATOM 1 O3' C B 886 57.841 108.803 81.246 1.00 26.81 O
ATOM 2 P U B 887 56.259 108.627 81.446 1.00 26.50 P
ATOM 3 OP1 U B 887 56.079 108.158 82.841 1.00 26.83 O
ATOM 4 OP2 U B 887 55.719 107.823 80.323 1.00 27.15 O
ATOM 5 O5' U B 887 55.686 110.111 81.375 1.00 26.18 O
ATOM 6 C5' U B 887 55.924 111.007 82.462 1.00 26.34 C
ATOM 7 C4' U B 887 55.576 112.429 82.100 1.00 25.70 C
ATOM 8 O4' U B 887 56.366 112.893 80.975 1.00 27.06 O
ATOM 9 C3' U B 887 54.164 112.754 81.660 1.00 24.12 C
ATOM 10 O3' U B 887 53.239 112.762 82.743 1.00 26.48 O
ATOM 11 C2' U B 887 54.370 114.158 81.109 1.00 23.67 C
ATOM 12 O2' U B 887 54.555 115.114 82.126 1.00 21.26 O
ATOM 13 C1' U B 887 55.703 114.000 80.380 1.00 24.10 C
ATOM 14 N1 U B 887 55.483 113.756 78.941 1.00 26.81 N
ATOM 15 C2 U B 887 55.110 114.853 78.177 1.00 26.18 C
ATOM 16 O2 U B 887 55.009 115.977 78.638 1.00 28.83 O
ATOM 17 N3 U B 887 54.854 114.591 76.861 1.00 26.19 N
ATOM 18 C4 U B 887 54.933 113.382 76.225 1.00 28.07 C
ATOM 19 O4 U B 887 54.548 113.302 75.056 1.00 28.15 O
ATOM 20 C5 U B 887 55.359 112.289 77.062 1.00 28.26 C
ATOM 21 C6 U B 887 55.611 112.508 78.361 1.00 25.60 C
ATOM 22 P G B 888 51.675 112.507 82.457 1.00 26.69 P
ATOM 23 OP1 G B 888 50.942 112.688 83.741 1.00 26.83 O
ATOM 24 OP2 G B 888 51.560 111.233 81.724 1.00 25.04 O
ATOM 25 O5' G B 888 51.261 113.696 81.482 1.00 23.55 O
TER
Atoms:
OP1: (58.533,127.701,82.459)
OP2: (57.402,128.070,84.724)
C3': (60.547,122.706,84.084)
C1': (58.515,121.605,83.744)
C5': (59.403,124.969,83.664)
O4': (58.175,122.911,84.175)
C8: (56.909,121.723,81.748)
O2': (60.513,120.524,82.872)
C6: (55.618,118.464,81.448)
C5: (56.199,119.719,81.707)
C4: (57.033,119.806,82.806)
P: (58.482,127.449,83.922)
C4': (59.405,123.661,84.440)
C2': (59.879,121.770,83.088)
C2: (56.711,117.696,83.335)
N1: (55.889,117.459,82.309)
N3: (57.336,118.818,83.669)
N6: (54.840,118.209,80.401)
N7: (56.122,120.940,81.050)
N9: (57.515,121.093,82.810)
O5': (58.412,125.878,84.199)
O3': (60.948,121.975,85.242)
OP2: (57.402,128.070,84.724)
C3': (60.547,122.706,84.084)
C1': (58.515,121.605,83.744)
C5': (59.403,124.969,83.664)
O4': (58.175,122.911,84.175)
C8: (56.909,121.723,81.748)
O2': (60.513,120.524,82.872)
C6: (55.618,118.464,81.448)
C5: (56.199,119.719,81.707)
C4: (57.033,119.806,82.806)
P: (58.482,127.449,83.922)
C4': (59.405,123.661,84.440)
C2': (59.879,121.770,83.088)
C2: (56.711,117.696,83.335)
N1: (55.889,117.459,82.309)
N3: (57.336,118.818,83.669)
N6: (54.840,118.209,80.401)
N7: (56.122,120.940,81.050)
N9: (57.515,121.093,82.810)
O5': (58.412,125.878,84.199)
O3': (60.948,121.975,85.242)
C4: (54.933,113.382,76.225)
N3: (54.854,114.591,76.861)
OP1: (56.079,108.158,82.841)
OP2: (55.719,107.823,80.323)
C2: (55.110,114.853,78.177)
C1': (55.703,114.000,80.380)
C3': (54.164,112.754,81.660)
O5': (55.686,110.111,81.375)
O4': (56.366,112.893,80.975)
C5': (55.924,111.007,82.462)
P: (56.259,108.627,81.446)
C4': (55.576,112.429,82.100)
C2': (54.370,114.158,81.109)
O2': (54.555,115.114,82.126)
N1: (55.483,113.756,78.941)
O4: (54.548,113.302,75.056)
O2: (55.009,115.977,78.638)
C6: (55.611,112.508,78.361)
C5: (55.359,112.289,77.062)
O3': (53.239,112.762,82.743)
N3: (54.854,114.591,76.861)
OP1: (56.079,108.158,82.841)
OP2: (55.719,107.823,80.323)
C2: (55.110,114.853,78.177)
C1': (55.703,114.000,80.380)
C3': (54.164,112.754,81.660)
O5': (55.686,110.111,81.375)
O4': (56.366,112.893,80.975)
C5': (55.924,111.007,82.462)
P: (56.259,108.627,81.446)
C4': (55.576,112.429,82.100)
C2': (54.370,114.158,81.109)
O2': (54.555,115.114,82.126)
N1: (55.483,113.756,78.941)
O4: (54.548,113.302,75.056)
O2: (55.009,115.977,78.638)
C6: (55.611,112.508,78.361)
C5: (55.359,112.289,77.062)
O3': (53.239,112.762,82.743)
Image (generated by PyMOL):