Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01815:02092
Extra
PDB:
ATOM 1 O3' C A1814 119.008 127.930 52.736 1.00 47.92 O
ATOM 2 P A A1815 119.428 127.582 51.225 1.00 48.94 P
ATOM 3 OP1 A A1815 120.744 126.908 51.236 1.00 46.43 O
ATOM 4 OP2 A A1815 119.248 128.825 50.436 1.00 49.05 O
ATOM 5 O5' A A1815 118.362 126.492 50.757 1.00 51.67 O
ATOM 6 C5' A A1815 116.947 126.783 50.737 1.00 54.62 C
ATOM 7 C4' A A1815 116.135 125.505 50.601 1.00 56.22 C
ATOM 8 O4' A A1815 116.293 124.940 49.266 1.00 57.77 O
ATOM 9 C3' A A1815 116.466 124.378 51.578 1.00 56.21 C
ATOM 10 O3' A A1815 115.283 123.652 51.869 1.00 54.53 O
ATOM 11 C2' A A1815 117.361 123.477 50.737 1.00 58.11 C
ATOM 12 O2' A A1815 117.379 122.139 51.185 1.00 58.24 O
ATOM 13 C1' A A1815 116.671 123.584 49.378 1.00 60.54 C
ATOM 14 N9 A A1815 117.476 123.210 48.212 1.00 65.12 N
ATOM 15 C8 A A1815 118.834 123.334 48.031 1.00 68.17 C
ATOM 16 N7 A A1815 119.259 122.876 46.878 1.00 70.43 N
ATOM 17 C5 A A1815 118.104 122.425 46.250 1.00 70.31 C
ATOM 18 C6 A A1815 117.875 121.816 44.988 1.00 71.32 C
ATOM 19 N6 A A1815 118.836 121.544 44.098 1.00 70.31 N
ATOM 20 N1 A A1815 116.604 121.491 44.674 1.00 71.09 N
ATOM 21 C2 A A1815 115.636 121.756 45.563 1.00 70.52 C
ATOM 22 N3 A A1815 115.724 122.318 46.770 1.00 69.51 N
ATOM 23 C4 A A1815 116.998 122.632 47.058 1.00 68.16 C
ATOM 24 P A A1816 114.394 124.041 53.146 1.00 55.31 P
ATOM 25 OP1 A A1816 113.329 123.008 53.238 1.00 56.49 O
ATOM 26 OP2 A A1816 114.014 125.476 53.037 1.00 55.59 O
ATOM 27 O5' A A1816 115.365 123.869 54.401 1.00 52.73 O
TER
ATOM 1 O3' C B2091 111.471 119.622 36.494 1.00 57.57 O
ATOM 2 P U B2092 111.748 121.167 36.830 1.00 58.42 P
ATOM 3 OP1 U B2092 110.460 121.774 37.223 1.00 58.33 O
ATOM 4 OP2 U B2092 112.536 121.768 35.723 1.00 57.78 O
ATOM 5 O5' U B2092 112.678 121.117 38.118 1.00 59.51 O
ATOM 6 C5' U B2092 112.157 120.663 39.373 1.00 61.17 C
ATOM 7 C4' U B2092 113.221 120.736 40.436 1.00 62.83 C
ATOM 8 O4' U B2092 114.309 119.843 40.102 1.00 64.06 O
ATOM 9 C3' U B2092 113.887 122.084 40.605 1.00 62.80 C
ATOM 10 O3' U B2092 113.076 122.917 41.418 1.00 66.03 O
ATOM 11 C2' U B2092 115.202 121.705 41.273 1.00 63.24 C
ATOM 12 O2' U B2092 115.051 121.415 42.642 1.00 61.16 O
ATOM 13 C1' U B2092 115.530 120.388 40.569 1.00 64.77 C
ATOM 14 N1 U B2092 116.463 120.497 39.435 1.00 67.29 N
ATOM 15 C2 U B2092 117.818 120.361 39.699 1.00 68.30 C
ATOM 16 O2 U B2092 118.268 120.167 40.818 1.00 68.71 O
ATOM 17 N3 U B2092 118.631 120.457 38.598 1.00 70.34 N
ATOM 18 C4 U B2092 118.244 120.665 37.290 1.00 70.17 C
ATOM 19 O4 U B2092 119.102 120.710 36.405 1.00 70.52 O
ATOM 20 C5 U B2092 116.833 120.800 37.100 1.00 69.39 C
ATOM 21 C6 U B2092 116.012 120.717 38.150 1.00 68.19 C
ATOM 22 P C B2093 113.052 124.503 41.171 1.00 69.31 P
ATOM 23 OP1 C B2093 111.884 125.041 41.915 1.00 70.25 O
ATOM 24 OP2 C B2093 113.163 124.756 39.714 1.00 70.18 O
ATOM 25 O5' C B2093 114.380 125.013 41.888 1.00 69.43 O
TER
ATOM 2 P A A1815 119.428 127.582 51.225 1.00 48.94 P
ATOM 3 OP1 A A1815 120.744 126.908 51.236 1.00 46.43 O
ATOM 4 OP2 A A1815 119.248 128.825 50.436 1.00 49.05 O
ATOM 5 O5' A A1815 118.362 126.492 50.757 1.00 51.67 O
ATOM 6 C5' A A1815 116.947 126.783 50.737 1.00 54.62 C
ATOM 7 C4' A A1815 116.135 125.505 50.601 1.00 56.22 C
ATOM 8 O4' A A1815 116.293 124.940 49.266 1.00 57.77 O
ATOM 9 C3' A A1815 116.466 124.378 51.578 1.00 56.21 C
ATOM 10 O3' A A1815 115.283 123.652 51.869 1.00 54.53 O
ATOM 11 C2' A A1815 117.361 123.477 50.737 1.00 58.11 C
ATOM 12 O2' A A1815 117.379 122.139 51.185 1.00 58.24 O
ATOM 13 C1' A A1815 116.671 123.584 49.378 1.00 60.54 C
ATOM 14 N9 A A1815 117.476 123.210 48.212 1.00 65.12 N
ATOM 15 C8 A A1815 118.834 123.334 48.031 1.00 68.17 C
ATOM 16 N7 A A1815 119.259 122.876 46.878 1.00 70.43 N
ATOM 17 C5 A A1815 118.104 122.425 46.250 1.00 70.31 C
ATOM 18 C6 A A1815 117.875 121.816 44.988 1.00 71.32 C
ATOM 19 N6 A A1815 118.836 121.544 44.098 1.00 70.31 N
ATOM 20 N1 A A1815 116.604 121.491 44.674 1.00 71.09 N
ATOM 21 C2 A A1815 115.636 121.756 45.563 1.00 70.52 C
ATOM 22 N3 A A1815 115.724 122.318 46.770 1.00 69.51 N
ATOM 23 C4 A A1815 116.998 122.632 47.058 1.00 68.16 C
ATOM 24 P A A1816 114.394 124.041 53.146 1.00 55.31 P
ATOM 25 OP1 A A1816 113.329 123.008 53.238 1.00 56.49 O
ATOM 26 OP2 A A1816 114.014 125.476 53.037 1.00 55.59 O
ATOM 27 O5' A A1816 115.365 123.869 54.401 1.00 52.73 O
TER
ATOM 1 O3' C B2091 111.471 119.622 36.494 1.00 57.57 O
ATOM 2 P U B2092 111.748 121.167 36.830 1.00 58.42 P
ATOM 3 OP1 U B2092 110.460 121.774 37.223 1.00 58.33 O
ATOM 4 OP2 U B2092 112.536 121.768 35.723 1.00 57.78 O
ATOM 5 O5' U B2092 112.678 121.117 38.118 1.00 59.51 O
ATOM 6 C5' U B2092 112.157 120.663 39.373 1.00 61.17 C
ATOM 7 C4' U B2092 113.221 120.736 40.436 1.00 62.83 C
ATOM 8 O4' U B2092 114.309 119.843 40.102 1.00 64.06 O
ATOM 9 C3' U B2092 113.887 122.084 40.605 1.00 62.80 C
ATOM 10 O3' U B2092 113.076 122.917 41.418 1.00 66.03 O
ATOM 11 C2' U B2092 115.202 121.705 41.273 1.00 63.24 C
ATOM 12 O2' U B2092 115.051 121.415 42.642 1.00 61.16 O
ATOM 13 C1' U B2092 115.530 120.388 40.569 1.00 64.77 C
ATOM 14 N1 U B2092 116.463 120.497 39.435 1.00 67.29 N
ATOM 15 C2 U B2092 117.818 120.361 39.699 1.00 68.30 C
ATOM 16 O2 U B2092 118.268 120.167 40.818 1.00 68.71 O
ATOM 17 N3 U B2092 118.631 120.457 38.598 1.00 70.34 N
ATOM 18 C4 U B2092 118.244 120.665 37.290 1.00 70.17 C
ATOM 19 O4 U B2092 119.102 120.710 36.405 1.00 70.52 O
ATOM 20 C5 U B2092 116.833 120.800 37.100 1.00 69.39 C
ATOM 21 C6 U B2092 116.012 120.717 38.150 1.00 68.19 C
ATOM 22 P C B2093 113.052 124.503 41.171 1.00 69.31 P
ATOM 23 OP1 C B2093 111.884 125.041 41.915 1.00 70.25 O
ATOM 24 OP2 C B2093 113.163 124.756 39.714 1.00 70.18 O
ATOM 25 O5' C B2093 114.380 125.013 41.888 1.00 69.43 O
TER
Atoms:
OP1: (120.744,126.908,51.236)
OP2: (119.248,128.825,50.436)
C3': (116.466,124.378,51.578)
C1': (116.671,123.584,49.378)
C5': (116.947,126.783,50.737)
O4': (116.293,124.940,49.266)
C8: (118.834,123.334,48.031)
O2': (117.379,122.139,51.185)
C6: (117.875,121.816,44.988)
C5: (118.104,122.425,46.250)
C4: (116.998,122.632,47.058)
P: (119.428,127.582,51.225)
C4': (116.135,125.505,50.601)
C2': (117.361,123.477,50.737)
C2: (115.636,121.756,45.563)
N1: (116.604,121.491,44.674)
N3: (115.724,122.318,46.770)
N6: (118.836,121.544,44.098)
N7: (119.259,122.876,46.878)
N9: (117.476,123.210,48.212)
O5': (118.362,126.492,50.757)
O3': (115.283,123.652,51.869)
OP2: (119.248,128.825,50.436)
C3': (116.466,124.378,51.578)
C1': (116.671,123.584,49.378)
C5': (116.947,126.783,50.737)
O4': (116.293,124.940,49.266)
C8: (118.834,123.334,48.031)
O2': (117.379,122.139,51.185)
C6: (117.875,121.816,44.988)
C5: (118.104,122.425,46.250)
C4: (116.998,122.632,47.058)
P: (119.428,127.582,51.225)
C4': (116.135,125.505,50.601)
C2': (117.361,123.477,50.737)
C2: (115.636,121.756,45.563)
N1: (116.604,121.491,44.674)
N3: (115.724,122.318,46.770)
N6: (118.836,121.544,44.098)
N7: (119.259,122.876,46.878)
N9: (117.476,123.210,48.212)
O5': (118.362,126.492,50.757)
O3': (115.283,123.652,51.869)
C4: (118.244,120.665,37.290)
N3: (118.631,120.457,38.598)
OP1: (110.460,121.774,37.223)
OP2: (112.536,121.768,35.723)
C2: (117.818,120.361,39.699)
C1': (115.530,120.388,40.569)
C3': (113.887,122.084,40.605)
O5': (112.678,121.117,38.118)
O4': (114.309,119.843,40.102)
C5': (112.157,120.663,39.373)
P: (111.748,121.167,36.830)
C4': (113.221,120.736,40.436)
C2': (115.202,121.705,41.273)
O2': (115.051,121.415,42.642)
N1: (116.463,120.497,39.435)
O4: (119.102,120.710,36.405)
O2: (118.268,120.167,40.818)
C6: (116.012,120.717,38.150)
C5: (116.833,120.800,37.100)
O3': (113.076,122.917,41.418)
N3: (118.631,120.457,38.598)
OP1: (110.460,121.774,37.223)
OP2: (112.536,121.768,35.723)
C2: (117.818,120.361,39.699)
C1': (115.530,120.388,40.569)
C3': (113.887,122.084,40.605)
O5': (112.678,121.117,38.118)
O4': (114.309,119.843,40.102)
C5': (112.157,120.663,39.373)
P: (111.748,121.167,36.830)
C4': (113.221,120.736,40.436)
C2': (115.202,121.705,41.273)
O2': (115.051,121.415,42.642)
N1: (116.463,120.497,39.435)
O4: (119.102,120.710,36.405)
O2: (118.268,120.167,40.818)
C6: (116.012,120.717,38.150)
C5: (116.833,120.800,37.100)
O3': (113.076,122.917,41.418)
Image (generated by PyMOL):