Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:02047:0887
Extra
PDB:
ATOM 1 O3' A A2046 59.872 127.619 84.693 1.00 42.61 O
ATOM 2 P A A2047 58.415 127.111 84.212 1.00 37.87 P
ATOM 3 OP1 A A2047 58.412 127.203 82.734 1.00 37.18 O
ATOM 4 OP2 A A2047 57.343 127.785 84.988 1.00 39.33 O
ATOM 5 O5' A A2047 58.397 125.568 84.595 1.00 39.07 O
ATOM 6 C5' A A2047 59.335 124.662 83.997 1.00 40.11 C
ATOM 7 C4' A A2047 59.318 123.331 84.708 1.00 39.63 C
ATOM 8 O4' A A2047 58.090 122.609 84.388 1.00 38.28 O
ATOM 9 C3' A A2047 60.460 122.403 84.300 1.00 40.09 C
ATOM 10 O3' A A2047 60.847 121.619 85.415 1.00 42.97 O
ATOM 11 C2' A A2047 59.806 121.498 83.273 1.00 38.99 C
ATOM 12 O2' A A2047 60.462 120.257 83.145 1.00 39.06 O
ATOM 13 C1' A A2047 58.424 121.328 83.891 1.00 39.38 C
ATOM 14 N9 A A2047 57.422 120.877 82.926 1.00 39.04 N
ATOM 15 C8 A A2047 56.844 121.569 81.890 1.00 39.68 C
ATOM 16 N7 A A2047 56.044 120.838 81.150 1.00 40.20 N
ATOM 17 C5 A A2047 56.084 119.586 81.750 1.00 38.88 C
ATOM 18 C6 A A2047 55.468 118.364 81.431 1.00 37.17 C
ATOM 19 N6 A A2047 54.670 118.194 80.382 1.00 36.23 N
ATOM 20 N1 A A2047 55.712 117.308 82.235 1.00 36.14 N
ATOM 21 C2 A A2047 56.524 117.476 83.284 1.00 36.54 C
ATOM 22 N3 A A2047 57.168 118.570 83.684 1.00 37.65 N
ATOM 23 C4 A A2047 56.906 119.603 82.861 1.00 38.57 C
ATOM 24 P G A2048 62.386 121.227 85.615 1.00 43.67 P
ATOM 25 OP1 G A2048 63.155 122.498 85.565 1.00 46.26 O
ATOM 26 OP2 G A2048 62.728 120.126 84.676 1.00 41.66 O
ATOM 27 O5' G A2048 62.429 120.667 87.108 1.00 42.86 O
TER
ATOM 1 O3' C B 886 57.809 108.697 81.203 1.00 26.56 O
ATOM 2 P U B 887 56.235 108.454 81.397 1.00 28.30 P
ATOM 3 OP1 U B 887 56.081 107.890 82.762 1.00 25.30 O
ATOM 4 OP2 U B 887 55.722 107.693 80.222 1.00 24.54 O
ATOM 5 O5' U B 887 55.617 109.926 81.409 1.00 27.13 O
ATOM 6 C5' U B 887 55.936 110.834 82.480 1.00 27.82 C
ATOM 7 C4' U B 887 55.516 112.255 82.154 1.00 27.52 C
ATOM 8 O4' U B 887 56.280 112.789 81.040 1.00 27.15 O
ATOM 9 C3' U B 887 54.083 112.515 81.722 1.00 27.31 C
ATOM 10 O3' U B 887 53.139 112.498 82.782 1.00 25.67 O
ATOM 11 C2' U B 887 54.201 113.924 81.167 1.00 27.86 C
ATOM 12 O2' U B 887 54.295 114.881 82.200 1.00 28.53 O
ATOM 13 C1' U B 887 55.537 113.843 80.433 1.00 27.92 C
ATOM 14 N1 U B 887 55.333 113.574 78.997 1.00 29.38 N
ATOM 15 C2 U B 887 54.932 114.645 78.212 1.00 29.25 C
ATOM 16 O2 U B 887 54.785 115.768 78.657 1.00 30.63 O
ATOM 17 N3 U B 887 54.712 114.354 76.888 1.00 29.24 N
ATOM 18 C4 U B 887 54.854 113.134 76.271 1.00 29.87 C
ATOM 19 O4 U B 887 54.579 113.029 75.073 1.00 29.92 O
ATOM 20 C5 U B 887 55.292 112.074 77.136 1.00 29.64 C
ATOM 21 C6 U B 887 55.509 112.322 78.436 1.00 29.56 C
ATOM 22 P G B 888 51.586 112.312 82.437 1.00 25.06 P
ATOM 23 OP1 G B 888 50.770 112.449 83.671 1.00 22.99 O
ATOM 24 OP2 G B 888 51.489 111.086 81.627 1.00 24.98 O
ATOM 25 O5' G B 888 51.257 113.535 81.479 1.00 23.10 O
TER
ATOM 2 P A A2047 58.415 127.111 84.212 1.00 37.87 P
ATOM 3 OP1 A A2047 58.412 127.203 82.734 1.00 37.18 O
ATOM 4 OP2 A A2047 57.343 127.785 84.988 1.00 39.33 O
ATOM 5 O5' A A2047 58.397 125.568 84.595 1.00 39.07 O
ATOM 6 C5' A A2047 59.335 124.662 83.997 1.00 40.11 C
ATOM 7 C4' A A2047 59.318 123.331 84.708 1.00 39.63 C
ATOM 8 O4' A A2047 58.090 122.609 84.388 1.00 38.28 O
ATOM 9 C3' A A2047 60.460 122.403 84.300 1.00 40.09 C
ATOM 10 O3' A A2047 60.847 121.619 85.415 1.00 42.97 O
ATOM 11 C2' A A2047 59.806 121.498 83.273 1.00 38.99 C
ATOM 12 O2' A A2047 60.462 120.257 83.145 1.00 39.06 O
ATOM 13 C1' A A2047 58.424 121.328 83.891 1.00 39.38 C
ATOM 14 N9 A A2047 57.422 120.877 82.926 1.00 39.04 N
ATOM 15 C8 A A2047 56.844 121.569 81.890 1.00 39.68 C
ATOM 16 N7 A A2047 56.044 120.838 81.150 1.00 40.20 N
ATOM 17 C5 A A2047 56.084 119.586 81.750 1.00 38.88 C
ATOM 18 C6 A A2047 55.468 118.364 81.431 1.00 37.17 C
ATOM 19 N6 A A2047 54.670 118.194 80.382 1.00 36.23 N
ATOM 20 N1 A A2047 55.712 117.308 82.235 1.00 36.14 N
ATOM 21 C2 A A2047 56.524 117.476 83.284 1.00 36.54 C
ATOM 22 N3 A A2047 57.168 118.570 83.684 1.00 37.65 N
ATOM 23 C4 A A2047 56.906 119.603 82.861 1.00 38.57 C
ATOM 24 P G A2048 62.386 121.227 85.615 1.00 43.67 P
ATOM 25 OP1 G A2048 63.155 122.498 85.565 1.00 46.26 O
ATOM 26 OP2 G A2048 62.728 120.126 84.676 1.00 41.66 O
ATOM 27 O5' G A2048 62.429 120.667 87.108 1.00 42.86 O
TER
ATOM 1 O3' C B 886 57.809 108.697 81.203 1.00 26.56 O
ATOM 2 P U B 887 56.235 108.454 81.397 1.00 28.30 P
ATOM 3 OP1 U B 887 56.081 107.890 82.762 1.00 25.30 O
ATOM 4 OP2 U B 887 55.722 107.693 80.222 1.00 24.54 O
ATOM 5 O5' U B 887 55.617 109.926 81.409 1.00 27.13 O
ATOM 6 C5' U B 887 55.936 110.834 82.480 1.00 27.82 C
ATOM 7 C4' U B 887 55.516 112.255 82.154 1.00 27.52 C
ATOM 8 O4' U B 887 56.280 112.789 81.040 1.00 27.15 O
ATOM 9 C3' U B 887 54.083 112.515 81.722 1.00 27.31 C
ATOM 10 O3' U B 887 53.139 112.498 82.782 1.00 25.67 O
ATOM 11 C2' U B 887 54.201 113.924 81.167 1.00 27.86 C
ATOM 12 O2' U B 887 54.295 114.881 82.200 1.00 28.53 O
ATOM 13 C1' U B 887 55.537 113.843 80.433 1.00 27.92 C
ATOM 14 N1 U B 887 55.333 113.574 78.997 1.00 29.38 N
ATOM 15 C2 U B 887 54.932 114.645 78.212 1.00 29.25 C
ATOM 16 O2 U B 887 54.785 115.768 78.657 1.00 30.63 O
ATOM 17 N3 U B 887 54.712 114.354 76.888 1.00 29.24 N
ATOM 18 C4 U B 887 54.854 113.134 76.271 1.00 29.87 C
ATOM 19 O4 U B 887 54.579 113.029 75.073 1.00 29.92 O
ATOM 20 C5 U B 887 55.292 112.074 77.136 1.00 29.64 C
ATOM 21 C6 U B 887 55.509 112.322 78.436 1.00 29.56 C
ATOM 22 P G B 888 51.586 112.312 82.437 1.00 25.06 P
ATOM 23 OP1 G B 888 50.770 112.449 83.671 1.00 22.99 O
ATOM 24 OP2 G B 888 51.489 111.086 81.627 1.00 24.98 O
ATOM 25 O5' G B 888 51.257 113.535 81.479 1.00 23.10 O
TER
Atoms:
OP1: (58.412,127.203,82.734)
OP2: (57.343,127.785,84.988)
C3': (60.460,122.403,84.300)
C1': (58.424,121.328,83.891)
C5': (59.335,124.662,83.997)
O4': (58.090,122.609,84.388)
C8: (56.844,121.569,81.890)
O2': (60.462,120.257,83.145)
C6: (55.468,118.364,81.431)
C5: (56.084,119.586,81.750)
C4: (56.906,119.603,82.861)
P: (58.415,127.111,84.212)
C4': (59.318,123.331,84.708)
C2': (59.806,121.498,83.273)
C2: (56.524,117.476,83.284)
N1: (55.712,117.308,82.235)
N3: (57.168,118.570,83.684)
N6: (54.670,118.194,80.382)
N7: (56.044,120.838,81.150)
N9: (57.422,120.877,82.926)
O5': (58.397,125.568,84.595)
O3': (60.847,121.619,85.415)
OP2: (57.343,127.785,84.988)
C3': (60.460,122.403,84.300)
C1': (58.424,121.328,83.891)
C5': (59.335,124.662,83.997)
O4': (58.090,122.609,84.388)
C8: (56.844,121.569,81.890)
O2': (60.462,120.257,83.145)
C6: (55.468,118.364,81.431)
C5: (56.084,119.586,81.750)
C4: (56.906,119.603,82.861)
P: (58.415,127.111,84.212)
C4': (59.318,123.331,84.708)
C2': (59.806,121.498,83.273)
C2: (56.524,117.476,83.284)
N1: (55.712,117.308,82.235)
N3: (57.168,118.570,83.684)
N6: (54.670,118.194,80.382)
N7: (56.044,120.838,81.150)
N9: (57.422,120.877,82.926)
O5': (58.397,125.568,84.595)
O3': (60.847,121.619,85.415)
C4: (54.854,113.134,76.271)
N3: (54.712,114.354,76.888)
OP1: (56.081,107.890,82.762)
OP2: (55.722,107.693,80.222)
C2: (54.932,114.645,78.212)
C1': (55.537,113.843,80.433)
C3': (54.083,112.515,81.722)
O5': (55.617,109.926,81.409)
O4': (56.280,112.789,81.040)
C5': (55.936,110.834,82.480)
P: (56.235,108.454,81.397)
C4': (55.516,112.255,82.154)
C2': (54.201,113.924,81.167)
O2': (54.295,114.881,82.200)
N1: (55.333,113.574,78.997)
O4: (54.579,113.029,75.073)
O2: (54.785,115.768,78.657)
C6: (55.509,112.322,78.436)
C5: (55.292,112.074,77.136)
O3': (53.139,112.498,82.782)
N3: (54.712,114.354,76.888)
OP1: (56.081,107.890,82.762)
OP2: (55.722,107.693,80.222)
C2: (54.932,114.645,78.212)
C1': (55.537,113.843,80.433)
C3': (54.083,112.515,81.722)
O5': (55.617,109.926,81.409)
O4': (56.280,112.789,81.040)
C5': (55.936,110.834,82.480)
P: (56.235,108.454,81.397)
C4': (55.516,112.255,82.154)
C2': (54.201,113.924,81.167)
O2': (54.295,114.881,82.200)
N1: (55.333,113.574,78.997)
O4: (54.579,113.029,75.073)
O2: (54.785,115.768,78.657)
C6: (55.509,112.322,78.436)
C5: (55.292,112.074,77.136)
O3': (53.139,112.498,82.782)
Image (generated by PyMOL):