Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A395:A545
Extra
PDB:
ATOM 1 O3' C A 394 -85.292 8.771 -73.142 1.00 17.79 O
ATOM 2 P A A 395 -86.386 9.561 -74.012 1.00 13.94 P
ATOM 3 OP1 A A 395 -87.727 9.115 -73.535 1.00 13.94 O
ATOM 4 OP2 A A 395 -86.030 9.368 -75.438 1.00 13.94 O
ATOM 5 O5' A A 395 -86.130 11.073 -73.606 1.00 13.94 O
ATOM 6 C5' A A 395 -85.021 11.774 -74.138 1.00 13.94 C
ATOM 7 C4' A A 395 -84.781 13.052 -73.396 1.00 13.94 C
ATOM 8 O4' A A 395 -85.778 14.028 -73.764 1.00 13.94 O
ATOM 9 C3' A A 395 -84.905 12.970 -71.891 1.00 13.94 C
ATOM 10 O3' A A 395 -83.752 12.431 -71.289 1.00 13.94 O
ATOM 11 C2' A A 395 -85.167 14.416 -71.494 1.00 13.94 C
ATOM 12 O2' A A 395 -83.942 15.124 -71.376 1.00 13.94 O
ATOM 13 C1' A A 395 -85.923 14.958 -72.716 1.00 13.94 C
ATOM 14 N9 A A 395 -87.366 15.225 -72.466 1.00 13.78 N
ATOM 15 C8 A A 395 -87.954 16.374 -72.917 1.00 13.78 C
ATOM 16 N7 A A 395 -89.217 16.507 -72.651 1.00 13.78 N
ATOM 17 C5 A A 395 -89.515 15.360 -71.960 1.00 13.78 C
ATOM 18 C6 A A 395 -90.732 14.931 -71.397 1.00 13.78 C
ATOM 19 N6 A A 395 -91.850 15.640 -71.475 1.00 13.78 N
ATOM 20 N1 A A 395 -90.759 13.752 -70.754 1.00 13.78 N
ATOM 21 C2 A A 395 -89.595 13.079 -70.710 1.00 13.78 C
ATOM 22 N3 A A 395 -88.376 13.375 -71.210 1.00 13.78 N
ATOM 23 C4 A A 395 -88.391 14.554 -71.838 1.00 13.78 C
ATOM 24 P U A 396 -83.863 11.673 -69.889 1.00 21.02 P
ATOM 25 OP1 U A 396 -82.737 10.690 -69.820 1.00 21.02 O
ATOM 26 OP2 U A 396 -85.264 11.175 -69.785 1.00 21.02 O
ATOM 27 O5' U A 396 -83.614 12.827 -68.840 1.00 21.02 O
TER
ATOM 1 O3' A B 544 -90.636 24.144 -71.887 1.00 20.69 O
ATOM 2 P A B 545 -90.291 24.436 -73.426 1.00 23.18 P
ATOM 3 OP1 A B 545 -89.048 23.713 -73.748 1.00 23.18 O
ATOM 4 OP2 A B 545 -90.332 25.894 -73.620 1.00 23.18 O
ATOM 5 O5' A B 545 -91.498 23.751 -74.175 1.00 23.18 O
ATOM 6 C5' A B 545 -91.343 22.449 -74.735 1.00 23.18 C
ATOM 7 C4' A B 545 -91.037 21.406 -73.681 1.00 23.18 C
ATOM 8 O4' A B 545 -92.275 20.742 -73.279 1.00 23.18 O
ATOM 9 C3' A B 545 -90.105 20.282 -74.140 1.00 23.18 C
ATOM 10 O3' A B 545 -89.369 19.802 -73.026 1.00 23.18 O
ATOM 11 C2' A B 545 -91.087 19.211 -74.562 1.00 23.18 C
ATOM 12 O2' A B 545 -90.545 17.917 -74.614 1.00 23.18 O
ATOM 13 C1' A B 545 -92.111 19.347 -73.451 1.00 23.18 C
ATOM 14 N9 A B 545 -93.411 18.737 -73.733 1.00 24.17 N
ATOM 15 C8 A B 545 -94.117 18.637 -74.902 1.00 24.17 C
ATOM 16 N7 A B 545 -95.264 18.002 -74.784 1.00 24.17 N
ATOM 17 C5 A B 545 -95.300 17.655 -73.454 1.00 24.17 C
ATOM 18 C6 A B 545 -96.248 16.960 -72.698 1.00 24.17 C
ATOM 19 N6 A B 545 -97.381 16.496 -73.226 1.00 24.17 N
ATOM 20 N1 A B 545 -95.997 16.765 -71.377 1.00 24.17 N
ATOM 21 C2 A B 545 -94.845 17.256 -70.890 1.00 24.17 C
ATOM 22 N3 A B 545 -93.870 17.927 -71.519 1.00 24.17 N
ATOM 23 C4 A B 545 -94.169 18.091 -72.807 1.00 24.17 C
ATOM 24 P G B 546 -87.838 20.212 -72.824 1.00 16.20 P
ATOM 25 OP1 G B 546 -87.357 20.728 -74.128 1.00 16.20 O
ATOM 26 OP2 G B 546 -87.144 19.054 -72.200 1.00 16.20 O
ATOM 27 O5' G B 546 -87.935 21.383 -71.769 1.00 16.20 O
TER
ATOM 2 P A A 395 -86.386 9.561 -74.012 1.00 13.94 P
ATOM 3 OP1 A A 395 -87.727 9.115 -73.535 1.00 13.94 O
ATOM 4 OP2 A A 395 -86.030 9.368 -75.438 1.00 13.94 O
ATOM 5 O5' A A 395 -86.130 11.073 -73.606 1.00 13.94 O
ATOM 6 C5' A A 395 -85.021 11.774 -74.138 1.00 13.94 C
ATOM 7 C4' A A 395 -84.781 13.052 -73.396 1.00 13.94 C
ATOM 8 O4' A A 395 -85.778 14.028 -73.764 1.00 13.94 O
ATOM 9 C3' A A 395 -84.905 12.970 -71.891 1.00 13.94 C
ATOM 10 O3' A A 395 -83.752 12.431 -71.289 1.00 13.94 O
ATOM 11 C2' A A 395 -85.167 14.416 -71.494 1.00 13.94 C
ATOM 12 O2' A A 395 -83.942 15.124 -71.376 1.00 13.94 O
ATOM 13 C1' A A 395 -85.923 14.958 -72.716 1.00 13.94 C
ATOM 14 N9 A A 395 -87.366 15.225 -72.466 1.00 13.78 N
ATOM 15 C8 A A 395 -87.954 16.374 -72.917 1.00 13.78 C
ATOM 16 N7 A A 395 -89.217 16.507 -72.651 1.00 13.78 N
ATOM 17 C5 A A 395 -89.515 15.360 -71.960 1.00 13.78 C
ATOM 18 C6 A A 395 -90.732 14.931 -71.397 1.00 13.78 C
ATOM 19 N6 A A 395 -91.850 15.640 -71.475 1.00 13.78 N
ATOM 20 N1 A A 395 -90.759 13.752 -70.754 1.00 13.78 N
ATOM 21 C2 A A 395 -89.595 13.079 -70.710 1.00 13.78 C
ATOM 22 N3 A A 395 -88.376 13.375 -71.210 1.00 13.78 N
ATOM 23 C4 A A 395 -88.391 14.554 -71.838 1.00 13.78 C
ATOM 24 P U A 396 -83.863 11.673 -69.889 1.00 21.02 P
ATOM 25 OP1 U A 396 -82.737 10.690 -69.820 1.00 21.02 O
ATOM 26 OP2 U A 396 -85.264 11.175 -69.785 1.00 21.02 O
ATOM 27 O5' U A 396 -83.614 12.827 -68.840 1.00 21.02 O
TER
ATOM 1 O3' A B 544 -90.636 24.144 -71.887 1.00 20.69 O
ATOM 2 P A B 545 -90.291 24.436 -73.426 1.00 23.18 P
ATOM 3 OP1 A B 545 -89.048 23.713 -73.748 1.00 23.18 O
ATOM 4 OP2 A B 545 -90.332 25.894 -73.620 1.00 23.18 O
ATOM 5 O5' A B 545 -91.498 23.751 -74.175 1.00 23.18 O
ATOM 6 C5' A B 545 -91.343 22.449 -74.735 1.00 23.18 C
ATOM 7 C4' A B 545 -91.037 21.406 -73.681 1.00 23.18 C
ATOM 8 O4' A B 545 -92.275 20.742 -73.279 1.00 23.18 O
ATOM 9 C3' A B 545 -90.105 20.282 -74.140 1.00 23.18 C
ATOM 10 O3' A B 545 -89.369 19.802 -73.026 1.00 23.18 O
ATOM 11 C2' A B 545 -91.087 19.211 -74.562 1.00 23.18 C
ATOM 12 O2' A B 545 -90.545 17.917 -74.614 1.00 23.18 O
ATOM 13 C1' A B 545 -92.111 19.347 -73.451 1.00 23.18 C
ATOM 14 N9 A B 545 -93.411 18.737 -73.733 1.00 24.17 N
ATOM 15 C8 A B 545 -94.117 18.637 -74.902 1.00 24.17 C
ATOM 16 N7 A B 545 -95.264 18.002 -74.784 1.00 24.17 N
ATOM 17 C5 A B 545 -95.300 17.655 -73.454 1.00 24.17 C
ATOM 18 C6 A B 545 -96.248 16.960 -72.698 1.00 24.17 C
ATOM 19 N6 A B 545 -97.381 16.496 -73.226 1.00 24.17 N
ATOM 20 N1 A B 545 -95.997 16.765 -71.377 1.00 24.17 N
ATOM 21 C2 A B 545 -94.845 17.256 -70.890 1.00 24.17 C
ATOM 22 N3 A B 545 -93.870 17.927 -71.519 1.00 24.17 N
ATOM 23 C4 A B 545 -94.169 18.091 -72.807 1.00 24.17 C
ATOM 24 P G B 546 -87.838 20.212 -72.824 1.00 16.20 P
ATOM 25 OP1 G B 546 -87.357 20.728 -74.128 1.00 16.20 O
ATOM 26 OP2 G B 546 -87.144 19.054 -72.200 1.00 16.20 O
ATOM 27 O5' G B 546 -87.935 21.383 -71.769 1.00 16.20 O
TER
Atoms:
OP1: (-87.727,9.115,-73.535)
OP2: (-86.030,9.368,-75.438)
C3': (-84.905,12.970,-71.891)
C1': (-85.923,14.958,-72.716)
C5': (-85.021,11.774,-74.138)
O4': (-85.778,14.028,-73.764)
C8: (-87.954,16.374,-72.917)
O2': (-83.942,15.124,-71.376)
C6: (-90.732,14.931,-71.397)
C5: (-89.515,15.360,-71.960)
C4: (-88.391,14.554,-71.838)
P: (-86.386,9.561,-74.012)
C4': (-84.781,13.052,-73.396)
C2': (-85.167,14.416,-71.494)
C2: (-89.595,13.079,-70.710)
N1: (-90.759,13.752,-70.754)
N3: (-88.376,13.375,-71.210)
N6: (-91.850,15.640,-71.475)
N7: (-89.217,16.507,-72.651)
N9: (-87.366,15.225,-72.466)
O5': (-86.130,11.073,-73.606)
O3': (-83.752,12.431,-71.289)
OP2: (-86.030,9.368,-75.438)
C3': (-84.905,12.970,-71.891)
C1': (-85.923,14.958,-72.716)
C5': (-85.021,11.774,-74.138)
O4': (-85.778,14.028,-73.764)
C8: (-87.954,16.374,-72.917)
O2': (-83.942,15.124,-71.376)
C6: (-90.732,14.931,-71.397)
C5: (-89.515,15.360,-71.960)
C4: (-88.391,14.554,-71.838)
P: (-86.386,9.561,-74.012)
C4': (-84.781,13.052,-73.396)
C2': (-85.167,14.416,-71.494)
C2: (-89.595,13.079,-70.710)
N1: (-90.759,13.752,-70.754)
N3: (-88.376,13.375,-71.210)
N6: (-91.850,15.640,-71.475)
N7: (-89.217,16.507,-72.651)
N9: (-87.366,15.225,-72.466)
O5': (-86.130,11.073,-73.606)
O3': (-83.752,12.431,-71.289)
OP1: (-89.048,23.713,-73.748)
OP2: (-90.332,25.894,-73.620)
C3': (-90.105,20.282,-74.140)
C1': (-92.111,19.347,-73.451)
C5': (-91.343,22.449,-74.735)
O4': (-92.275,20.742,-73.279)
C8: (-94.117,18.637,-74.902)
O2': (-90.545,17.917,-74.614)
C6: (-96.248,16.960,-72.698)
C5: (-95.300,17.655,-73.454)
C4: (-94.169,18.091,-72.807)
P: (-90.291,24.436,-73.426)
C4': (-91.037,21.406,-73.681)
C2': (-91.087,19.211,-74.562)
C2: (-94.845,17.256,-70.890)
N1: (-95.997,16.765,-71.377)
N3: (-93.870,17.927,-71.519)
N6: (-97.381,16.496,-73.226)
N7: (-95.264,18.002,-74.784)
N9: (-93.411,18.737,-73.733)
O5': (-91.498,23.751,-74.175)
O3': (-89.369,19.802,-73.026)
OP2: (-90.332,25.894,-73.620)
C3': (-90.105,20.282,-74.140)
C1': (-92.111,19.347,-73.451)
C5': (-91.343,22.449,-74.735)
O4': (-92.275,20.742,-73.279)
C8: (-94.117,18.637,-74.902)
O2': (-90.545,17.917,-74.614)
C6: (-96.248,16.960,-72.698)
C5: (-95.300,17.655,-73.454)
C4: (-94.169,18.091,-72.807)
P: (-90.291,24.436,-73.426)
C4': (-91.037,21.406,-73.681)
C2': (-91.087,19.211,-74.562)
C2: (-94.845,17.256,-70.890)
N1: (-95.997,16.765,-71.377)
N3: (-93.870,17.927,-71.519)
N6: (-97.381,16.496,-73.226)
N7: (-95.264,18.002,-74.784)
N9: (-93.411,18.737,-73.733)
O5': (-91.498,23.751,-74.175)
O3': (-89.369,19.802,-73.026)
Image (generated by PyMOL):