Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1841:A1840
Extra
PDB:
ATOM 1 O3' A A1840 -88.637 0.741 43.407 1.00 56.57 O
ATOM 2 P A A1841 -88.538 1.132 44.960 1.00 58.51 P
ATOM 3 OP1 A A1841 -88.511 2.611 45.023 1.00 58.51 O
ATOM 4 OP2 A A1841 -87.401 0.367 45.537 1.00 58.51 O
ATOM 5 O5' A A1841 -89.919 0.581 45.548 1.00 58.51 O
ATOM 6 C5' A A1841 -90.806 1.441 46.249 1.00 58.51 C
ATOM 7 C4' A A1841 -92.204 1.396 45.684 1.00 58.51 C
ATOM 8 O4' A A1841 -92.181 1.621 44.237 1.00 58.51 O
ATOM 9 C3' A A1841 -92.918 0.074 45.790 1.00 58.51 C
ATOM 10 O3' A A1841 -93.345 -0.268 47.079 1.00 58.51 O
ATOM 11 C2' A A1841 -94.025 0.239 44.773 1.00 58.51 C
ATOM 12 O2' A A1841 -94.978 1.200 45.208 1.00 58.51 O
ATOM 13 C1' A A1841 -93.205 0.826 43.625 1.00 58.51 C
ATOM 14 N9 A A1841 -92.558 -0.264 42.837 1.00 58.65 N
ATOM 15 C8 A A1841 -91.238 -0.653 42.901 1.00 58.65 C
ATOM 16 N7 A A1841 -90.926 -1.684 42.145 1.00 58.65 N
ATOM 17 C5 A A1841 -92.127 -2.052 41.546 1.00 58.65 C
ATOM 18 C6 A A1841 -92.456 -3.086 40.633 1.00 58.65 C
ATOM 19 N6 A A1841 -91.591 -3.972 40.136 1.00 58.65 N
ATOM 20 N1 A A1841 -93.732 -3.180 40.234 1.00 58.65 N
ATOM 21 C2 A A1841 -94.613 -2.296 40.717 1.00 58.65 C
ATOM 22 N3 A A1841 -94.431 -1.285 41.572 1.00 58.65 N
ATOM 23 C4 A A1841 -93.144 -1.197 41.969 1.00 58.65 C
ATOM 24 P G A1842 -93.102 -1.780 47.555 1.00 26.80 P
ATOM 25 OP1 G A1842 -93.213 -1.820 49.038 1.00 26.80 O
ATOM 26 OP2 G A1842 -91.815 -2.216 46.917 1.00 26.80 O
ATOM 27 O5' G A1842 -94.331 -2.551 46.899 1.00 26.80 O
TER
ATOM 1 O3' G B1839 -83.510 1.244 40.793 1.00 22.52 O
ATOM 2 P A B1840 -83.043 0.978 42.311 1.00 56.57 P
ATOM 3 OP1 A B1840 -82.547 2.254 42.838 1.00 56.57 O
ATOM 4 OP2 A B1840 -82.132 -0.189 42.307 1.00 56.57 O
ATOM 5 O5' A B1840 -84.396 0.597 43.029 1.00 56.57 O
ATOM 6 C5' A B1840 -85.516 1.458 42.948 1.00 56.57 C
ATOM 7 C4' A B1840 -86.590 0.870 42.077 1.00 56.57 C
ATOM 8 O4' A B1840 -85.988 -0.008 41.093 1.00 56.57 O
ATOM 9 C3' A B1840 -87.610 -0.010 42.783 1.00 56.57 C
ATOM 10 O3' A B1840 -88.637 0.741 43.407 1.00 56.57 O
ATOM 11 C2' A B1840 -88.114 -0.898 41.654 1.00 56.57 C
ATOM 12 O2' A B1840 -89.051 -0.199 40.847 1.00 56.57 O
ATOM 13 C1' A B1840 -86.846 -1.098 40.835 1.00 56.57 C
ATOM 14 N9 A B1840 -86.144 -2.359 41.161 1.00 56.63 N
ATOM 15 C8 A B1840 -84.888 -2.538 41.689 1.00 56.63 C
ATOM 16 N7 A B1840 -84.535 -3.795 41.808 1.00 56.63 N
ATOM 17 C5 A B1840 -85.626 -4.491 41.312 1.00 56.63 C
ATOM 18 C6 A B1840 -85.885 -5.862 41.160 1.00 56.63 C
ATOM 19 N6 A B1840 -85.023 -6.818 41.521 1.00 56.63 N
ATOM 20 N1 A B1840 -87.074 -6.222 40.621 1.00 56.63 N
ATOM 21 C2 A B1840 -87.947 -5.270 40.266 1.00 56.63 C
ATOM 22 N3 A B1840 -87.820 -3.953 40.367 1.00 56.63 N
ATOM 23 C4 A B1840 -86.621 -3.623 40.900 1.00 56.63 C
ATOM 24 P A B1841 -88.538 1.132 44.960 1.00 58.51 P
ATOM 25 OP1 A B1841 -88.511 2.611 45.023 1.00 58.51 O
ATOM 26 OP2 A B1841 -87.401 0.367 45.537 1.00 58.51 O
ATOM 27 O5' A B1841 -89.919 0.581 45.548 1.00 58.51 O
TER
ATOM 2 P A A1841 -88.538 1.132 44.960 1.00 58.51 P
ATOM 3 OP1 A A1841 -88.511 2.611 45.023 1.00 58.51 O
ATOM 4 OP2 A A1841 -87.401 0.367 45.537 1.00 58.51 O
ATOM 5 O5' A A1841 -89.919 0.581 45.548 1.00 58.51 O
ATOM 6 C5' A A1841 -90.806 1.441 46.249 1.00 58.51 C
ATOM 7 C4' A A1841 -92.204 1.396 45.684 1.00 58.51 C
ATOM 8 O4' A A1841 -92.181 1.621 44.237 1.00 58.51 O
ATOM 9 C3' A A1841 -92.918 0.074 45.790 1.00 58.51 C
ATOM 10 O3' A A1841 -93.345 -0.268 47.079 1.00 58.51 O
ATOM 11 C2' A A1841 -94.025 0.239 44.773 1.00 58.51 C
ATOM 12 O2' A A1841 -94.978 1.200 45.208 1.00 58.51 O
ATOM 13 C1' A A1841 -93.205 0.826 43.625 1.00 58.51 C
ATOM 14 N9 A A1841 -92.558 -0.264 42.837 1.00 58.65 N
ATOM 15 C8 A A1841 -91.238 -0.653 42.901 1.00 58.65 C
ATOM 16 N7 A A1841 -90.926 -1.684 42.145 1.00 58.65 N
ATOM 17 C5 A A1841 -92.127 -2.052 41.546 1.00 58.65 C
ATOM 18 C6 A A1841 -92.456 -3.086 40.633 1.00 58.65 C
ATOM 19 N6 A A1841 -91.591 -3.972 40.136 1.00 58.65 N
ATOM 20 N1 A A1841 -93.732 -3.180 40.234 1.00 58.65 N
ATOM 21 C2 A A1841 -94.613 -2.296 40.717 1.00 58.65 C
ATOM 22 N3 A A1841 -94.431 -1.285 41.572 1.00 58.65 N
ATOM 23 C4 A A1841 -93.144 -1.197 41.969 1.00 58.65 C
ATOM 24 P G A1842 -93.102 -1.780 47.555 1.00 26.80 P
ATOM 25 OP1 G A1842 -93.213 -1.820 49.038 1.00 26.80 O
ATOM 26 OP2 G A1842 -91.815 -2.216 46.917 1.00 26.80 O
ATOM 27 O5' G A1842 -94.331 -2.551 46.899 1.00 26.80 O
TER
ATOM 1 O3' G B1839 -83.510 1.244 40.793 1.00 22.52 O
ATOM 2 P A B1840 -83.043 0.978 42.311 1.00 56.57 P
ATOM 3 OP1 A B1840 -82.547 2.254 42.838 1.00 56.57 O
ATOM 4 OP2 A B1840 -82.132 -0.189 42.307 1.00 56.57 O
ATOM 5 O5' A B1840 -84.396 0.597 43.029 1.00 56.57 O
ATOM 6 C5' A B1840 -85.516 1.458 42.948 1.00 56.57 C
ATOM 7 C4' A B1840 -86.590 0.870 42.077 1.00 56.57 C
ATOM 8 O4' A B1840 -85.988 -0.008 41.093 1.00 56.57 O
ATOM 9 C3' A B1840 -87.610 -0.010 42.783 1.00 56.57 C
ATOM 10 O3' A B1840 -88.637 0.741 43.407 1.00 56.57 O
ATOM 11 C2' A B1840 -88.114 -0.898 41.654 1.00 56.57 C
ATOM 12 O2' A B1840 -89.051 -0.199 40.847 1.00 56.57 O
ATOM 13 C1' A B1840 -86.846 -1.098 40.835 1.00 56.57 C
ATOM 14 N9 A B1840 -86.144 -2.359 41.161 1.00 56.63 N
ATOM 15 C8 A B1840 -84.888 -2.538 41.689 1.00 56.63 C
ATOM 16 N7 A B1840 -84.535 -3.795 41.808 1.00 56.63 N
ATOM 17 C5 A B1840 -85.626 -4.491 41.312 1.00 56.63 C
ATOM 18 C6 A B1840 -85.885 -5.862 41.160 1.00 56.63 C
ATOM 19 N6 A B1840 -85.023 -6.818 41.521 1.00 56.63 N
ATOM 20 N1 A B1840 -87.074 -6.222 40.621 1.00 56.63 N
ATOM 21 C2 A B1840 -87.947 -5.270 40.266 1.00 56.63 C
ATOM 22 N3 A B1840 -87.820 -3.953 40.367 1.00 56.63 N
ATOM 23 C4 A B1840 -86.621 -3.623 40.900 1.00 56.63 C
ATOM 24 P A B1841 -88.538 1.132 44.960 1.00 58.51 P
ATOM 25 OP1 A B1841 -88.511 2.611 45.023 1.00 58.51 O
ATOM 26 OP2 A B1841 -87.401 0.367 45.537 1.00 58.51 O
ATOM 27 O5' A B1841 -89.919 0.581 45.548 1.00 58.51 O
TER
Atoms:
OP1: (-88.511,2.611,45.023)
OP2: (-87.401,0.367,45.537)
C3': (-92.918,0.074,45.790)
C1': (-93.205,0.826,43.625)
C5': (-90.806,1.441,46.249)
O4': (-92.181,1.621,44.237)
C8: (-91.238,-0.653,42.901)
O2': (-94.978,1.200,45.208)
C6: (-92.456,-3.086,40.633)
C5: (-92.127,-2.052,41.546)
C4: (-93.144,-1.197,41.969)
P: (-88.538,1.132,44.960)
C4': (-92.204,1.396,45.684)
C2': (-94.025,0.239,44.773)
C2: (-94.613,-2.296,40.717)
N1: (-93.732,-3.180,40.234)
N3: (-94.431,-1.285,41.572)
N6: (-91.591,-3.972,40.136)
N7: (-90.926,-1.684,42.145)
N9: (-92.558,-0.264,42.837)
O5': (-89.919,0.581,45.548)
O3': (-93.345,-0.268,47.079)
OP2: (-87.401,0.367,45.537)
C3': (-92.918,0.074,45.790)
C1': (-93.205,0.826,43.625)
C5': (-90.806,1.441,46.249)
O4': (-92.181,1.621,44.237)
C8: (-91.238,-0.653,42.901)
O2': (-94.978,1.200,45.208)
C6: (-92.456,-3.086,40.633)
C5: (-92.127,-2.052,41.546)
C4: (-93.144,-1.197,41.969)
P: (-88.538,1.132,44.960)
C4': (-92.204,1.396,45.684)
C2': (-94.025,0.239,44.773)
C2: (-94.613,-2.296,40.717)
N1: (-93.732,-3.180,40.234)
N3: (-94.431,-1.285,41.572)
N6: (-91.591,-3.972,40.136)
N7: (-90.926,-1.684,42.145)
N9: (-92.558,-0.264,42.837)
O5': (-89.919,0.581,45.548)
O3': (-93.345,-0.268,47.079)
OP1: (-82.547,2.254,42.838)
OP2: (-82.132,-0.189,42.307)
C3': (-87.610,-0.010,42.783)
C1': (-86.846,-1.098,40.835)
C5': (-85.516,1.458,42.948)
O4': (-85.988,-0.008,41.093)
C8: (-84.888,-2.538,41.689)
O2': (-89.051,-0.199,40.847)
C6: (-85.885,-5.862,41.160)
C5: (-85.626,-4.491,41.312)
C4: (-86.621,-3.623,40.900)
P: (-83.043,0.978,42.311)
C4': (-86.590,0.870,42.077)
C2': (-88.114,-0.898,41.654)
C2: (-87.947,-5.270,40.266)
N1: (-87.074,-6.222,40.621)
N3: (-87.820,-3.953,40.367)
N6: (-85.023,-6.818,41.521)
N7: (-84.535,-3.795,41.808)
N9: (-86.144,-2.359,41.161)
O5': (-84.396,0.597,43.029)
O3': (-88.637,0.741,43.407)
OP2: (-82.132,-0.189,42.307)
C3': (-87.610,-0.010,42.783)
C1': (-86.846,-1.098,40.835)
C5': (-85.516,1.458,42.948)
O4': (-85.988,-0.008,41.093)
C8: (-84.888,-2.538,41.689)
O2': (-89.051,-0.199,40.847)
C6: (-85.885,-5.862,41.160)
C5: (-85.626,-4.491,41.312)
C4: (-86.621,-3.623,40.900)
P: (-83.043,0.978,42.311)
C4': (-86.590,0.870,42.077)
C2': (-88.114,-0.898,41.654)
C2: (-87.947,-5.270,40.266)
N1: (-87.074,-6.222,40.621)
N3: (-87.820,-3.953,40.367)
N6: (-85.023,-6.818,41.521)
N7: (-84.535,-3.795,41.808)
N9: (-86.144,-2.359,41.161)
O5': (-84.396,0.597,43.029)
O3': (-88.637,0.741,43.407)
Image (generated by PyMOL):