Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02079:02106
Extra
PDB:
ATOM 1 O3' C A2078 109.480 111.102 31.912 1.00 51.38 O
ATOM 2 P U A2079 110.955 111.159 31.273 1.00 53.63 P
ATOM 3 OP1 U A2079 111.645 112.344 31.847 1.00 53.77 O
ATOM 4 OP2 U A2079 110.810 111.035 29.796 1.00 53.14 O
ATOM 5 O5' U A2079 111.710 109.856 31.777 1.00 52.52 O
ATOM 6 C5' U A2079 112.918 109.438 31.125 1.00 53.01 C
ATOM 7 C4' U A2079 113.507 108.250 31.828 1.00 54.50 C
ATOM 8 O4' U A2079 114.062 108.666 33.103 1.00 54.24 O
ATOM 9 C3' U A2079 112.531 107.119 32.133 1.00 55.93 C
ATOM 10 O3' U A2079 113.242 105.888 32.076 1.00 60.93 O
ATOM 11 C2' U A2079 112.144 107.414 33.582 1.00 55.28 C
ATOM 12 O2' U A2079 111.712 106.277 34.302 1.00 54.28 O
ATOM 13 C1' U A2079 113.478 107.904 34.135 1.00 53.38 C
ATOM 14 N1 U A2079 113.431 108.716 35.359 1.00 51.92 N
ATOM 15 C2 U A2079 113.888 108.126 36.519 1.00 52.57 C
ATOM 16 O2 U A2079 114.242 106.958 36.577 1.00 54.56 O
ATOM 17 N3 U A2079 113.908 108.945 37.618 1.00 52.83 N
ATOM 18 C4 U A2079 113.505 110.254 37.682 1.00 52.28 C
ATOM 19 O4 U A2079 113.654 110.874 38.737 1.00 55.22 O
ATOM 20 C5 U A2079 112.999 110.785 36.452 1.00 50.61 C
ATOM 21 C6 U A2079 112.981 110.018 35.359 1.00 51.06 C
ATOM 22 P G A2080 113.631 105.249 30.652 1.00 64.36 P
ATOM 23 OP1 G A2080 112.622 105.724 29.658 1.00 62.12 O
ATOM 24 OP2 G A2080 113.818 103.788 30.866 1.00 64.49 O
ATOM 25 O5' G A2080 115.059 105.894 30.326 1.00 66.04 O
TER
ATOM 1 O3' C B2105 115.724 109.081 45.241 1.00 60.32 O
ATOM 2 P A B2106 114.228 109.477 45.678 1.00 59.58 P
ATOM 3 OP1 A B2106 114.027 108.932 47.047 1.00 61.76 O
ATOM 4 OP2 A B2106 113.305 109.072 44.584 1.00 58.86 O
ATOM 5 O5' A B2106 114.247 111.070 45.775 1.00 56.45 O
ATOM 6 C5' A B2106 114.874 111.737 46.887 1.00 52.62 C
ATOM 7 C4' A B2106 114.799 113.239 46.715 1.00 51.70 C
ATOM 8 O4' A B2106 115.514 113.617 45.512 1.00 52.40 O
ATOM 9 C3' A B2106 113.410 113.815 46.508 1.00 52.13 C
ATOM 10 O3' A B2106 112.715 114.006 47.728 1.00 52.80 O
ATOM 11 C2' A B2106 113.700 115.121 45.785 1.00 50.40 C
ATOM 12 O2' A B2106 114.152 116.146 46.646 1.00 50.75 O
ATOM 13 C1' A B2106 114.840 114.690 44.866 1.00 48.37 C
ATOM 14 N9 A B2106 114.363 114.201 43.574 1.00 44.12 N
ATOM 15 C8 A B2106 114.274 112.894 43.155 1.00 42.70 C
ATOM 16 N7 A B2106 113.821 112.761 41.933 1.00 42.66 N
ATOM 17 C5 A B2106 113.591 114.066 41.521 1.00 41.68 C
ATOM 18 C6 A B2106 113.112 114.600 40.319 1.00 40.53 C
ATOM 19 N6 A B2106 112.776 113.853 39.264 1.00 40.01 N
ATOM 20 N1 A B2106 112.992 115.943 40.233 1.00 39.49 N
ATOM 21 C2 A B2106 113.341 116.687 41.289 1.00 39.50 C
ATOM 22 N3 A B2106 113.812 116.302 42.471 1.00 41.25 N
ATOM 23 C4 A B2106 113.916 114.963 42.523 1.00 42.50 C
ATOM 24 P C B2107 111.148 113.671 47.798 1.00 54.77 P
ATOM 25 OP1 C B2107 110.717 113.898 49.204 1.00 53.92 O
ATOM 26 OP2 C B2107 110.927 112.342 47.162 1.00 52.31 O
ATOM 27 O5' C B2107 110.476 114.778 46.870 1.00 51.06 O
TER
ATOM 2 P U A2079 110.955 111.159 31.273 1.00 53.63 P
ATOM 3 OP1 U A2079 111.645 112.344 31.847 1.00 53.77 O
ATOM 4 OP2 U A2079 110.810 111.035 29.796 1.00 53.14 O
ATOM 5 O5' U A2079 111.710 109.856 31.777 1.00 52.52 O
ATOM 6 C5' U A2079 112.918 109.438 31.125 1.00 53.01 C
ATOM 7 C4' U A2079 113.507 108.250 31.828 1.00 54.50 C
ATOM 8 O4' U A2079 114.062 108.666 33.103 1.00 54.24 O
ATOM 9 C3' U A2079 112.531 107.119 32.133 1.00 55.93 C
ATOM 10 O3' U A2079 113.242 105.888 32.076 1.00 60.93 O
ATOM 11 C2' U A2079 112.144 107.414 33.582 1.00 55.28 C
ATOM 12 O2' U A2079 111.712 106.277 34.302 1.00 54.28 O
ATOM 13 C1' U A2079 113.478 107.904 34.135 1.00 53.38 C
ATOM 14 N1 U A2079 113.431 108.716 35.359 1.00 51.92 N
ATOM 15 C2 U A2079 113.888 108.126 36.519 1.00 52.57 C
ATOM 16 O2 U A2079 114.242 106.958 36.577 1.00 54.56 O
ATOM 17 N3 U A2079 113.908 108.945 37.618 1.00 52.83 N
ATOM 18 C4 U A2079 113.505 110.254 37.682 1.00 52.28 C
ATOM 19 O4 U A2079 113.654 110.874 38.737 1.00 55.22 O
ATOM 20 C5 U A2079 112.999 110.785 36.452 1.00 50.61 C
ATOM 21 C6 U A2079 112.981 110.018 35.359 1.00 51.06 C
ATOM 22 P G A2080 113.631 105.249 30.652 1.00 64.36 P
ATOM 23 OP1 G A2080 112.622 105.724 29.658 1.00 62.12 O
ATOM 24 OP2 G A2080 113.818 103.788 30.866 1.00 64.49 O
ATOM 25 O5' G A2080 115.059 105.894 30.326 1.00 66.04 O
TER
ATOM 1 O3' C B2105 115.724 109.081 45.241 1.00 60.32 O
ATOM 2 P A B2106 114.228 109.477 45.678 1.00 59.58 P
ATOM 3 OP1 A B2106 114.027 108.932 47.047 1.00 61.76 O
ATOM 4 OP2 A B2106 113.305 109.072 44.584 1.00 58.86 O
ATOM 5 O5' A B2106 114.247 111.070 45.775 1.00 56.45 O
ATOM 6 C5' A B2106 114.874 111.737 46.887 1.00 52.62 C
ATOM 7 C4' A B2106 114.799 113.239 46.715 1.00 51.70 C
ATOM 8 O4' A B2106 115.514 113.617 45.512 1.00 52.40 O
ATOM 9 C3' A B2106 113.410 113.815 46.508 1.00 52.13 C
ATOM 10 O3' A B2106 112.715 114.006 47.728 1.00 52.80 O
ATOM 11 C2' A B2106 113.700 115.121 45.785 1.00 50.40 C
ATOM 12 O2' A B2106 114.152 116.146 46.646 1.00 50.75 O
ATOM 13 C1' A B2106 114.840 114.690 44.866 1.00 48.37 C
ATOM 14 N9 A B2106 114.363 114.201 43.574 1.00 44.12 N
ATOM 15 C8 A B2106 114.274 112.894 43.155 1.00 42.70 C
ATOM 16 N7 A B2106 113.821 112.761 41.933 1.00 42.66 N
ATOM 17 C5 A B2106 113.591 114.066 41.521 1.00 41.68 C
ATOM 18 C6 A B2106 113.112 114.600 40.319 1.00 40.53 C
ATOM 19 N6 A B2106 112.776 113.853 39.264 1.00 40.01 N
ATOM 20 N1 A B2106 112.992 115.943 40.233 1.00 39.49 N
ATOM 21 C2 A B2106 113.341 116.687 41.289 1.00 39.50 C
ATOM 22 N3 A B2106 113.812 116.302 42.471 1.00 41.25 N
ATOM 23 C4 A B2106 113.916 114.963 42.523 1.00 42.50 C
ATOM 24 P C B2107 111.148 113.671 47.798 1.00 54.77 P
ATOM 25 OP1 C B2107 110.717 113.898 49.204 1.00 53.92 O
ATOM 26 OP2 C B2107 110.927 112.342 47.162 1.00 52.31 O
ATOM 27 O5' C B2107 110.476 114.778 46.870 1.00 51.06 O
TER
Atoms:
C4: (113.505,110.254,37.682)
N3: (113.908,108.945,37.618)
OP1: (111.645,112.344,31.847)
OP2: (110.810,111.035,29.796)
C2: (113.888,108.126,36.519)
C1': (113.478,107.904,34.135)
C3': (112.531,107.119,32.133)
O5': (111.710,109.856,31.777)
O4': (114.062,108.666,33.103)
C5': (112.918,109.438,31.125)
P: (110.955,111.159,31.273)
C4': (113.507,108.250,31.828)
C2': (112.144,107.414,33.582)
O2': (111.712,106.277,34.302)
N1: (113.431,108.716,35.359)
O4: (113.654,110.874,38.737)
O2: (114.242,106.958,36.577)
C6: (112.981,110.018,35.359)
C5: (112.999,110.785,36.452)
O3': (113.242,105.888,32.076)
N3: (113.908,108.945,37.618)
OP1: (111.645,112.344,31.847)
OP2: (110.810,111.035,29.796)
C2: (113.888,108.126,36.519)
C1': (113.478,107.904,34.135)
C3': (112.531,107.119,32.133)
O5': (111.710,109.856,31.777)
O4': (114.062,108.666,33.103)
C5': (112.918,109.438,31.125)
P: (110.955,111.159,31.273)
C4': (113.507,108.250,31.828)
C2': (112.144,107.414,33.582)
O2': (111.712,106.277,34.302)
N1: (113.431,108.716,35.359)
O4: (113.654,110.874,38.737)
O2: (114.242,106.958,36.577)
C6: (112.981,110.018,35.359)
C5: (112.999,110.785,36.452)
O3': (113.242,105.888,32.076)
OP1: (114.027,108.932,47.047)
OP2: (113.305,109.072,44.584)
C3': (113.410,113.815,46.508)
C1': (114.840,114.690,44.866)
C5': (114.874,111.737,46.887)
O4': (115.514,113.617,45.512)
C8: (114.274,112.894,43.155)
O2': (114.152,116.146,46.646)
C6: (113.112,114.600,40.319)
C5: (113.591,114.066,41.521)
C4: (113.916,114.963,42.523)
P: (114.228,109.477,45.678)
C4': (114.799,113.239,46.715)
C2': (113.700,115.121,45.785)
C2: (113.341,116.687,41.289)
N1: (112.992,115.943,40.233)
N3: (113.812,116.302,42.471)
N6: (112.776,113.853,39.264)
N7: (113.821,112.761,41.933)
N9: (114.363,114.201,43.574)
O5': (114.247,111.070,45.775)
O3': (112.715,114.006,47.728)
OP2: (113.305,109.072,44.584)
C3': (113.410,113.815,46.508)
C1': (114.840,114.690,44.866)
C5': (114.874,111.737,46.887)
O4': (115.514,113.617,45.512)
C8: (114.274,112.894,43.155)
O2': (114.152,116.146,46.646)
C6: (113.112,114.600,40.319)
C5: (113.591,114.066,41.521)
C4: (113.916,114.963,42.523)
P: (114.228,109.477,45.678)
C4': (114.799,113.239,46.715)
C2': (113.700,115.121,45.785)
C2: (113.341,116.687,41.289)
N1: (112.992,115.943,40.233)
N3: (113.812,116.302,42.471)
N6: (112.776,113.853,39.264)
N7: (113.821,112.761,41.933)
N9: (114.363,114.201,43.574)
O5': (114.247,111.070,45.775)
O3': (112.715,114.006,47.728)
Image (generated by PyMOL):