Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01829:01816
Extra
PDB:
ATOM 1 O3' C A1828 110.038 135.942 62.268 1.00 48.81 O
ATOM 2 P U A1829 111.334 136.822 61.916 1.00 46.56 P
ATOM 3 OP1 U A1829 112.526 135.941 62.065 1.00 44.00 O
ATOM 4 OP2 U A1829 111.226 138.062 62.712 1.00 40.86 O
ATOM 5 O5' U A1829 111.157 137.185 60.376 1.00 45.71 O
ATOM 6 C5' U A1829 111.844 138.316 59.816 1.00 47.45 C
ATOM 7 C4' U A1829 112.000 138.160 58.327 1.00 45.94 C
ATOM 8 O4' U A1829 112.819 136.988 58.061 1.00 45.33 O
ATOM 9 C3' U A1829 110.703 137.965 57.544 1.00 47.48 C
ATOM 10 O3' U A1829 110.836 138.541 56.249 1.00 49.24 O
ATOM 11 C2' U A1829 110.657 136.448 57.373 1.00 47.76 C
ATOM 12 O2' U A1829 109.888 136.024 56.263 1.00 46.75 O
ATOM 13 C1' U A1829 112.138 136.149 57.151 1.00 46.42 C
ATOM 14 N1 U A1829 112.540 134.751 57.368 1.00 45.28 N
ATOM 15 C2 U A1829 112.716 133.968 56.249 1.00 44.67 C
ATOM 16 O2 U A1829 112.572 134.396 55.114 1.00 46.84 O
ATOM 17 N3 U A1829 113.070 132.665 56.501 1.00 42.24 N
ATOM 18 C4 U A1829 113.267 132.078 57.730 1.00 41.91 C
ATOM 19 O4 U A1829 113.584 130.889 57.791 1.00 41.62 O
ATOM 20 C5 U A1829 113.075 132.950 58.841 1.00 43.49 C
ATOM 21 C6 U A1829 112.727 134.229 58.629 1.00 46.55 C
ATOM 22 P C A1830 110.712 140.132 56.052 1.00 52.26 P
ATOM 23 OP1 C A1830 110.199 140.743 57.311 1.00 48.47 O
ATOM 24 OP2 C A1830 109.997 140.363 54.757 1.00 47.90 O
ATOM 25 O5' C A1830 112.221 140.617 55.895 1.00 52.86 O
TER
ATOM 1 O3' A B1815 115.696 123.636 52.269 1.00 66.13 O
ATOM 2 P A B1816 114.711 124.120 53.443 1.00 64.92 P
ATOM 3 OP1 A B1816 113.546 123.193 53.485 1.00 65.70 O
ATOM 4 OP2 A B1816 114.475 125.577 53.241 1.00 64.99 O
ATOM 5 O5' A B1816 115.556 123.910 54.782 1.00 60.77 O
ATOM 6 C5' A B1816 116.328 122.715 55.005 1.00 53.75 C
ATOM 7 C4' A B1816 116.788 122.647 56.445 1.00 49.93 C
ATOM 8 O4' A B1816 117.480 123.877 56.785 1.00 48.39 O
ATOM 9 C3' A B1816 115.695 122.555 57.496 1.00 50.38 C
ATOM 10 O3' A B1816 115.246 121.216 57.647 1.00 52.51 O
ATOM 11 C2' A B1816 116.407 123.067 58.743 1.00 48.84 C
ATOM 12 O2' A B1816 117.281 122.118 59.322 1.00 48.68 O
ATOM 13 C1' A B1816 117.256 124.193 58.154 1.00 47.54 C
ATOM 14 N9 A B1816 116.623 125.513 58.249 1.00 44.10 N
ATOM 15 C8 A B1816 116.094 126.283 57.242 1.00 43.59 C
ATOM 16 N7 A B1816 115.591 127.419 57.654 1.00 43.16 N
ATOM 17 C5 A B1816 115.798 127.396 59.027 1.00 42.30 C
ATOM 18 C6 A B1816 115.472 128.310 60.051 1.00 44.18 C
ATOM 19 N6 A B1816 114.836 129.471 59.845 1.00 44.83 N
ATOM 20 N1 A B1816 115.820 127.984 61.315 1.00 44.88 N
ATOM 21 C2 A B1816 116.448 126.817 61.523 1.00 44.78 C
ATOM 22 N3 A B1816 116.799 125.879 60.647 1.00 42.39 N
ATOM 23 C4 A B1816 116.439 126.233 59.404 1.00 41.51 C
ATOM 24 P A B1817 113.725 120.922 58.076 1.00 52.91 P
ATOM 25 OP1 A B1817 113.556 119.450 58.003 1.00 52.31 O
ATOM 26 OP2 A B1817 112.832 121.815 57.269 1.00 51.94 O
ATOM 27 O5' A B1817 113.660 121.324 59.615 1.00 48.58 O
TER
ATOM 2 P U A1829 111.334 136.822 61.916 1.00 46.56 P
ATOM 3 OP1 U A1829 112.526 135.941 62.065 1.00 44.00 O
ATOM 4 OP2 U A1829 111.226 138.062 62.712 1.00 40.86 O
ATOM 5 O5' U A1829 111.157 137.185 60.376 1.00 45.71 O
ATOM 6 C5' U A1829 111.844 138.316 59.816 1.00 47.45 C
ATOM 7 C4' U A1829 112.000 138.160 58.327 1.00 45.94 C
ATOM 8 O4' U A1829 112.819 136.988 58.061 1.00 45.33 O
ATOM 9 C3' U A1829 110.703 137.965 57.544 1.00 47.48 C
ATOM 10 O3' U A1829 110.836 138.541 56.249 1.00 49.24 O
ATOM 11 C2' U A1829 110.657 136.448 57.373 1.00 47.76 C
ATOM 12 O2' U A1829 109.888 136.024 56.263 1.00 46.75 O
ATOM 13 C1' U A1829 112.138 136.149 57.151 1.00 46.42 C
ATOM 14 N1 U A1829 112.540 134.751 57.368 1.00 45.28 N
ATOM 15 C2 U A1829 112.716 133.968 56.249 1.00 44.67 C
ATOM 16 O2 U A1829 112.572 134.396 55.114 1.00 46.84 O
ATOM 17 N3 U A1829 113.070 132.665 56.501 1.00 42.24 N
ATOM 18 C4 U A1829 113.267 132.078 57.730 1.00 41.91 C
ATOM 19 O4 U A1829 113.584 130.889 57.791 1.00 41.62 O
ATOM 20 C5 U A1829 113.075 132.950 58.841 1.00 43.49 C
ATOM 21 C6 U A1829 112.727 134.229 58.629 1.00 46.55 C
ATOM 22 P C A1830 110.712 140.132 56.052 1.00 52.26 P
ATOM 23 OP1 C A1830 110.199 140.743 57.311 1.00 48.47 O
ATOM 24 OP2 C A1830 109.997 140.363 54.757 1.00 47.90 O
ATOM 25 O5' C A1830 112.221 140.617 55.895 1.00 52.86 O
TER
ATOM 1 O3' A B1815 115.696 123.636 52.269 1.00 66.13 O
ATOM 2 P A B1816 114.711 124.120 53.443 1.00 64.92 P
ATOM 3 OP1 A B1816 113.546 123.193 53.485 1.00 65.70 O
ATOM 4 OP2 A B1816 114.475 125.577 53.241 1.00 64.99 O
ATOM 5 O5' A B1816 115.556 123.910 54.782 1.00 60.77 O
ATOM 6 C5' A B1816 116.328 122.715 55.005 1.00 53.75 C
ATOM 7 C4' A B1816 116.788 122.647 56.445 1.00 49.93 C
ATOM 8 O4' A B1816 117.480 123.877 56.785 1.00 48.39 O
ATOM 9 C3' A B1816 115.695 122.555 57.496 1.00 50.38 C
ATOM 10 O3' A B1816 115.246 121.216 57.647 1.00 52.51 O
ATOM 11 C2' A B1816 116.407 123.067 58.743 1.00 48.84 C
ATOM 12 O2' A B1816 117.281 122.118 59.322 1.00 48.68 O
ATOM 13 C1' A B1816 117.256 124.193 58.154 1.00 47.54 C
ATOM 14 N9 A B1816 116.623 125.513 58.249 1.00 44.10 N
ATOM 15 C8 A B1816 116.094 126.283 57.242 1.00 43.59 C
ATOM 16 N7 A B1816 115.591 127.419 57.654 1.00 43.16 N
ATOM 17 C5 A B1816 115.798 127.396 59.027 1.00 42.30 C
ATOM 18 C6 A B1816 115.472 128.310 60.051 1.00 44.18 C
ATOM 19 N6 A B1816 114.836 129.471 59.845 1.00 44.83 N
ATOM 20 N1 A B1816 115.820 127.984 61.315 1.00 44.88 N
ATOM 21 C2 A B1816 116.448 126.817 61.523 1.00 44.78 C
ATOM 22 N3 A B1816 116.799 125.879 60.647 1.00 42.39 N
ATOM 23 C4 A B1816 116.439 126.233 59.404 1.00 41.51 C
ATOM 24 P A B1817 113.725 120.922 58.076 1.00 52.91 P
ATOM 25 OP1 A B1817 113.556 119.450 58.003 1.00 52.31 O
ATOM 26 OP2 A B1817 112.832 121.815 57.269 1.00 51.94 O
ATOM 27 O5' A B1817 113.660 121.324 59.615 1.00 48.58 O
TER
Atoms:
C4: (113.267,132.078,57.730)
N3: (113.070,132.665,56.501)
OP1: (112.526,135.941,62.065)
OP2: (111.226,138.062,62.712)
C2: (112.716,133.968,56.249)
C1': (112.138,136.149,57.151)
C3': (110.703,137.965,57.544)
O5': (111.157,137.185,60.376)
O4': (112.819,136.988,58.061)
C5': (111.844,138.316,59.816)
P: (111.334,136.822,61.916)
C4': (112.000,138.160,58.327)
C2': (110.657,136.448,57.373)
O2': (109.888,136.024,56.263)
N1: (112.540,134.751,57.368)
O4: (113.584,130.889,57.791)
O2: (112.572,134.396,55.114)
C6: (112.727,134.229,58.629)
C5: (113.075,132.950,58.841)
O3': (110.836,138.541,56.249)
N3: (113.070,132.665,56.501)
OP1: (112.526,135.941,62.065)
OP2: (111.226,138.062,62.712)
C2: (112.716,133.968,56.249)
C1': (112.138,136.149,57.151)
C3': (110.703,137.965,57.544)
O5': (111.157,137.185,60.376)
O4': (112.819,136.988,58.061)
C5': (111.844,138.316,59.816)
P: (111.334,136.822,61.916)
C4': (112.000,138.160,58.327)
C2': (110.657,136.448,57.373)
O2': (109.888,136.024,56.263)
N1: (112.540,134.751,57.368)
O4: (113.584,130.889,57.791)
O2: (112.572,134.396,55.114)
C6: (112.727,134.229,58.629)
C5: (113.075,132.950,58.841)
O3': (110.836,138.541,56.249)
OP1: (113.546,123.193,53.485)
OP2: (114.475,125.577,53.241)
C3': (115.695,122.555,57.496)
C1': (117.256,124.193,58.154)
C5': (116.328,122.715,55.005)
O4': (117.480,123.877,56.785)
C8: (116.094,126.283,57.242)
O2': (117.281,122.118,59.322)
C6: (115.472,128.310,60.051)
C5: (115.798,127.396,59.027)
C4: (116.439,126.233,59.404)
P: (114.711,124.120,53.443)
C4': (116.788,122.647,56.445)
C2': (116.407,123.067,58.743)
C2: (116.448,126.817,61.523)
N1: (115.820,127.984,61.315)
N3: (116.799,125.879,60.647)
N6: (114.836,129.471,59.845)
N7: (115.591,127.419,57.654)
N9: (116.623,125.513,58.249)
O5': (115.556,123.910,54.782)
O3': (115.246,121.216,57.647)
OP2: (114.475,125.577,53.241)
C3': (115.695,122.555,57.496)
C1': (117.256,124.193,58.154)
C5': (116.328,122.715,55.005)
O4': (117.480,123.877,56.785)
C8: (116.094,126.283,57.242)
O2': (117.281,122.118,59.322)
C6: (115.472,128.310,60.051)
C5: (115.798,127.396,59.027)
C4: (116.439,126.233,59.404)
P: (114.711,124.120,53.443)
C4': (116.788,122.647,56.445)
C2': (116.407,123.067,58.743)
C2: (116.448,126.817,61.523)
N1: (115.820,127.984,61.315)
N3: (116.799,125.879,60.647)
N6: (114.836,129.471,59.845)
N7: (115.591,127.419,57.654)
N9: (116.623,125.513,58.249)
O5': (115.556,123.910,54.782)
O3': (115.246,121.216,57.647)
Image (generated by PyMOL):