Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01829:01816
Extra
PDB:
ATOM 1 O3' C A1828 109.745 135.675 61.818 1.00 43.78 O
ATOM 2 P U A1829 111.071 136.491 61.466 1.00 43.17 P
ATOM 3 OP1 U A1829 112.208 135.532 61.531 1.00 41.12 O
ATOM 4 OP2 U A1829 111.071 137.706 62.320 1.00 41.18 O
ATOM 5 O5' U A1829 110.846 136.905 59.947 1.00 40.85 O
ATOM 6 C5' U A1829 111.482 138.057 59.406 1.00 40.60 C
ATOM 7 C4' U A1829 111.694 137.883 57.933 1.00 39.29 C
ATOM 8 O4' U A1829 112.510 136.701 57.714 1.00 38.85 O
ATOM 9 C3' U A1829 110.431 137.682 57.105 1.00 40.47 C
ATOM 10 O3' U A1829 110.631 138.297 55.838 1.00 42.87 O
ATOM 11 C2' U A1829 110.388 136.165 56.933 1.00 39.83 C
ATOM 12 O2' U A1829 109.675 135.729 55.792 1.00 39.08 O
ATOM 13 C1' U A1829 111.872 135.863 56.778 1.00 38.31 C
ATOM 14 N1 U A1829 112.272 134.467 57.012 1.00 37.20 N
ATOM 15 C2 U A1829 112.443 133.674 55.902 1.00 36.46 C
ATOM 16 O2 U A1829 112.279 134.087 54.773 1.00 38.93 O
ATOM 17 N3 U A1829 112.817 132.379 56.159 1.00 36.02 N
ATOM 18 C4 U A1829 113.037 131.805 57.393 1.00 36.31 C
ATOM 19 O4 U A1829 113.348 130.614 57.463 1.00 34.53 O
ATOM 20 C5 U A1829 112.845 132.691 58.500 1.00 36.88 C
ATOM 21 C6 U A1829 112.474 133.962 58.277 1.00 38.04 C
ATOM 22 P C A1830 110.507 139.894 55.693 1.00 44.51 P
ATOM 23 OP1 C A1830 109.976 140.457 56.967 1.00 41.52 O
ATOM 24 OP2 C A1830 109.807 140.166 54.406 1.00 40.95 O
ATOM 25 O5' C A1830 112.018 140.394 55.590 1.00 45.39 O
TER
ATOM 1 O3' A B1815 115.283 123.652 51.869 1.00 54.53 O
ATOM 2 P A B1816 114.394 124.041 53.146 1.00 55.31 P
ATOM 3 OP1 A B1816 113.329 123.008 53.238 1.00 56.49 O
ATOM 4 OP2 A B1816 114.014 125.476 53.037 1.00 55.59 O
ATOM 5 O5' A B1816 115.365 123.869 54.401 1.00 52.73 O
ATOM 6 C5' A B1816 116.082 122.642 54.631 1.00 47.72 C
ATOM 7 C4' A B1816 116.553 122.564 56.066 1.00 44.47 C
ATOM 8 O4' A B1816 117.210 123.808 56.420 1.00 44.67 O
ATOM 9 C3' A B1816 115.482 122.436 57.127 1.00 45.33 C
ATOM 10 O3' A B1816 115.030 121.094 57.253 1.00 45.85 O
ATOM 11 C2' A B1816 116.211 122.925 58.374 1.00 45.18 C
ATOM 12 O2' A B1816 117.110 121.977 58.912 1.00 44.97 O
ATOM 13 C1' A B1816 117.030 124.076 57.802 1.00 44.39 C
ATOM 14 N9 A B1816 116.379 125.379 57.945 1.00 45.19 N
ATOM 15 C8 A B1816 115.823 126.157 56.958 1.00 46.37 C
ATOM 16 N7 A B1816 115.311 127.282 57.396 1.00 46.82 N
ATOM 17 C5 A B1816 115.541 127.244 58.764 1.00 45.73 C
ATOM 18 C6 A B1816 115.224 128.141 59.803 1.00 47.05 C
ATOM 19 N6 A B1816 114.598 129.308 59.611 1.00 47.10 N
ATOM 20 N1 A B1816 115.579 127.795 61.063 1.00 47.60 N
ATOM 21 C2 A B1816 116.218 126.630 61.250 1.00 47.05 C
ATOM 22 N3 A B1816 116.575 125.708 60.354 1.00 46.12 N
ATOM 23 C4 A B1816 116.200 126.078 59.117 1.00 45.33 C
ATOM 24 P A B1817 113.504 120.804 57.674 1.00 46.11 P
ATOM 25 OP1 A B1817 113.305 119.341 57.540 1.00 47.03 O
ATOM 26 OP2 A B1817 112.635 121.738 56.902 1.00 44.47 O
ATOM 27 O5' A B1817 113.442 121.163 59.227 1.00 41.06 O
TER
ATOM 2 P U A1829 111.071 136.491 61.466 1.00 43.17 P
ATOM 3 OP1 U A1829 112.208 135.532 61.531 1.00 41.12 O
ATOM 4 OP2 U A1829 111.071 137.706 62.320 1.00 41.18 O
ATOM 5 O5' U A1829 110.846 136.905 59.947 1.00 40.85 O
ATOM 6 C5' U A1829 111.482 138.057 59.406 1.00 40.60 C
ATOM 7 C4' U A1829 111.694 137.883 57.933 1.00 39.29 C
ATOM 8 O4' U A1829 112.510 136.701 57.714 1.00 38.85 O
ATOM 9 C3' U A1829 110.431 137.682 57.105 1.00 40.47 C
ATOM 10 O3' U A1829 110.631 138.297 55.838 1.00 42.87 O
ATOM 11 C2' U A1829 110.388 136.165 56.933 1.00 39.83 C
ATOM 12 O2' U A1829 109.675 135.729 55.792 1.00 39.08 O
ATOM 13 C1' U A1829 111.872 135.863 56.778 1.00 38.31 C
ATOM 14 N1 U A1829 112.272 134.467 57.012 1.00 37.20 N
ATOM 15 C2 U A1829 112.443 133.674 55.902 1.00 36.46 C
ATOM 16 O2 U A1829 112.279 134.087 54.773 1.00 38.93 O
ATOM 17 N3 U A1829 112.817 132.379 56.159 1.00 36.02 N
ATOM 18 C4 U A1829 113.037 131.805 57.393 1.00 36.31 C
ATOM 19 O4 U A1829 113.348 130.614 57.463 1.00 34.53 O
ATOM 20 C5 U A1829 112.845 132.691 58.500 1.00 36.88 C
ATOM 21 C6 U A1829 112.474 133.962 58.277 1.00 38.04 C
ATOM 22 P C A1830 110.507 139.894 55.693 1.00 44.51 P
ATOM 23 OP1 C A1830 109.976 140.457 56.967 1.00 41.52 O
ATOM 24 OP2 C A1830 109.807 140.166 54.406 1.00 40.95 O
ATOM 25 O5' C A1830 112.018 140.394 55.590 1.00 45.39 O
TER
ATOM 1 O3' A B1815 115.283 123.652 51.869 1.00 54.53 O
ATOM 2 P A B1816 114.394 124.041 53.146 1.00 55.31 P
ATOM 3 OP1 A B1816 113.329 123.008 53.238 1.00 56.49 O
ATOM 4 OP2 A B1816 114.014 125.476 53.037 1.00 55.59 O
ATOM 5 O5' A B1816 115.365 123.869 54.401 1.00 52.73 O
ATOM 6 C5' A B1816 116.082 122.642 54.631 1.00 47.72 C
ATOM 7 C4' A B1816 116.553 122.564 56.066 1.00 44.47 C
ATOM 8 O4' A B1816 117.210 123.808 56.420 1.00 44.67 O
ATOM 9 C3' A B1816 115.482 122.436 57.127 1.00 45.33 C
ATOM 10 O3' A B1816 115.030 121.094 57.253 1.00 45.85 O
ATOM 11 C2' A B1816 116.211 122.925 58.374 1.00 45.18 C
ATOM 12 O2' A B1816 117.110 121.977 58.912 1.00 44.97 O
ATOM 13 C1' A B1816 117.030 124.076 57.802 1.00 44.39 C
ATOM 14 N9 A B1816 116.379 125.379 57.945 1.00 45.19 N
ATOM 15 C8 A B1816 115.823 126.157 56.958 1.00 46.37 C
ATOM 16 N7 A B1816 115.311 127.282 57.396 1.00 46.82 N
ATOM 17 C5 A B1816 115.541 127.244 58.764 1.00 45.73 C
ATOM 18 C6 A B1816 115.224 128.141 59.803 1.00 47.05 C
ATOM 19 N6 A B1816 114.598 129.308 59.611 1.00 47.10 N
ATOM 20 N1 A B1816 115.579 127.795 61.063 1.00 47.60 N
ATOM 21 C2 A B1816 116.218 126.630 61.250 1.00 47.05 C
ATOM 22 N3 A B1816 116.575 125.708 60.354 1.00 46.12 N
ATOM 23 C4 A B1816 116.200 126.078 59.117 1.00 45.33 C
ATOM 24 P A B1817 113.504 120.804 57.674 1.00 46.11 P
ATOM 25 OP1 A B1817 113.305 119.341 57.540 1.00 47.03 O
ATOM 26 OP2 A B1817 112.635 121.738 56.902 1.00 44.47 O
ATOM 27 O5' A B1817 113.442 121.163 59.227 1.00 41.06 O
TER
Atoms:
C4: (113.037,131.805,57.393)
N3: (112.817,132.379,56.159)
OP1: (112.208,135.532,61.531)
OP2: (111.071,137.706,62.320)
C2: (112.443,133.674,55.902)
C1': (111.872,135.863,56.778)
C3': (110.431,137.682,57.105)
O5': (110.846,136.905,59.947)
O4': (112.510,136.701,57.714)
C5': (111.482,138.057,59.406)
P: (111.071,136.491,61.466)
C4': (111.694,137.883,57.933)
C2': (110.388,136.165,56.933)
O2': (109.675,135.729,55.792)
N1: (112.272,134.467,57.012)
O4: (113.348,130.614,57.463)
O2: (112.279,134.087,54.773)
C6: (112.474,133.962,58.277)
C5: (112.845,132.691,58.500)
O3': (110.631,138.297,55.838)
N3: (112.817,132.379,56.159)
OP1: (112.208,135.532,61.531)
OP2: (111.071,137.706,62.320)
C2: (112.443,133.674,55.902)
C1': (111.872,135.863,56.778)
C3': (110.431,137.682,57.105)
O5': (110.846,136.905,59.947)
O4': (112.510,136.701,57.714)
C5': (111.482,138.057,59.406)
P: (111.071,136.491,61.466)
C4': (111.694,137.883,57.933)
C2': (110.388,136.165,56.933)
O2': (109.675,135.729,55.792)
N1: (112.272,134.467,57.012)
O4: (113.348,130.614,57.463)
O2: (112.279,134.087,54.773)
C6: (112.474,133.962,58.277)
C5: (112.845,132.691,58.500)
O3': (110.631,138.297,55.838)
OP1: (113.329,123.008,53.238)
OP2: (114.014,125.476,53.037)
C3': (115.482,122.436,57.127)
C1': (117.030,124.076,57.802)
C5': (116.082,122.642,54.631)
O4': (117.210,123.808,56.420)
C8: (115.823,126.157,56.958)
O2': (117.110,121.977,58.912)
C6: (115.224,128.141,59.803)
C5: (115.541,127.244,58.764)
C4: (116.200,126.078,59.117)
P: (114.394,124.041,53.146)
C4': (116.553,122.564,56.066)
C2': (116.211,122.925,58.374)
C2: (116.218,126.630,61.250)
N1: (115.579,127.795,61.063)
N3: (116.575,125.708,60.354)
N6: (114.598,129.308,59.611)
N7: (115.311,127.282,57.396)
N9: (116.379,125.379,57.945)
O5': (115.365,123.869,54.401)
O3': (115.030,121.094,57.253)
OP2: (114.014,125.476,53.037)
C3': (115.482,122.436,57.127)
C1': (117.030,124.076,57.802)
C5': (116.082,122.642,54.631)
O4': (117.210,123.808,56.420)
C8: (115.823,126.157,56.958)
O2': (117.110,121.977,58.912)
C6: (115.224,128.141,59.803)
C5: (115.541,127.244,58.764)
C4: (116.200,126.078,59.117)
P: (114.394,124.041,53.146)
C4': (116.553,122.564,56.066)
C2': (116.211,122.925,58.374)
C2: (116.218,126.630,61.250)
N1: (115.579,127.795,61.063)
N3: (116.575,125.708,60.354)
N6: (114.598,129.308,59.611)
N7: (115.311,127.282,57.396)
N9: (116.379,125.379,57.945)
O5': (115.365,123.869,54.401)
O3': (115.030,121.094,57.253)
Image (generated by PyMOL):