ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3FU2:C23:C17

Extra

PDB:
ATOM 1 O3' A A 22 3.412 -25.054 -29.608 1.00 69.23 O
ATOM 2 P A A 23 3.286 -26.659 -29.687 1.00 69.52 P
ATOM 3 OP1 A A 23 3.969 -27.155 -28.473 1.00 69.36 O
ATOM 4 OP2 A A 23 3.752 -27.120 -31.025 1.00 68.79 O
ATOM 5 O5' A A 23 1.715 -26.945 -29.538 1.00 69.05 O
ATOM 6 C5' A A 23 0.968 -26.320 -28.492 1.00 68.83 C
ATOM 7 C4' A A 23 -0.445 -26.880 -28.377 1.00 69.53 C
ATOM 8 O4' A A 23 -1.324 -26.241 -29.349 1.00 69.36 O
ATOM 9 C3' A A 23 -0.516 -28.383 -28.670 1.00 69.56 C
ATOM 10 O3' A A 23 -1.119 -29.182 -27.641 1.00 70.52 O
ATOM 11 C2' A A 23 -1.015 -28.511 -30.108 1.00 70.00 C
ATOM 12 O2' A A 23 -1.960 -29.540 -30.297 1.00 70.70 O
ATOM 13 C1' A A 23 -1.782 -27.205 -30.268 1.00 70.89 C
ATOM 14 N9 A A 23 -2.015 -26.650 -31.602 1.00 72.06 N
ATOM 15 C8 A A 23 -1.166 -26.517 -32.672 1.00 72.40 C
ATOM 16 N7 A A 23 -1.755 -26.075 -33.760 1.00 72.64 N
ATOM 17 C5 A A 23 -3.075 -25.884 -33.372 1.00 72.94 C
ATOM 18 C6 A A 23 -4.219 -25.436 -34.067 1.00 73.54 C
ATOM 19 N6 A A 23 -4.220 -25.088 -35.356 1.00 74.52 N
ATOM 20 N1 A A 23 -5.379 -25.360 -33.383 1.00 72.75 N
ATOM 21 C2 A A 23 -5.384 -25.710 -32.094 1.00 72.33 C
ATOM 22 N3 A A 23 -4.383 -26.145 -31.334 1.00 72.16 N
ATOM 23 C4 A A 23 -3.243 -26.213 -32.042 1.00 72.40 C
ATOM 24 P A A 24 -1.400 -30.757 -27.882 1.00 71.13 P
ATOM 25 OP1 A A 24 -1.152 -31.455 -26.599 1.00 71.28 O
ATOM 26 OP2 A A 24 -0.668 -31.188 -29.100 1.00 71.63 O
ATOM 27 O5' A A 24 -2.966 -30.866 -28.185 1.00 69.48 O
TER

ATOM 1 O3' C B 16 -12.502 -30.189 -37.361 1.00 44.74 O
ATOM 2 P U B 17 -12.998 -28.696 -37.045 1.00 43.62 P
ATOM 3 OP1 U B 17 -14.137 -28.780 -36.101 1.00 43.73 O
ATOM 4 OP2 U B 17 -13.177 -28.020 -38.354 1.00 42.54 O
ATOM 5 O5' U B 17 -11.765 -28.041 -36.279 1.00 41.13 O
ATOM 6 C5' U B 17 -11.260 -28.622 -35.081 1.00 39.93 C
ATOM 7 C4' U B 17 -10.083 -27.824 -34.567 1.00 40.89 C
ATOM 8 O4' U B 17 -8.919 -28.004 -35.418 1.00 41.26 O
ATOM 9 C3' U B 17 -10.297 -26.327 -34.543 1.00 41.11 C
ATOM 10 O3' U B 17 -11.004 -25.968 -33.376 1.00 43.77 O
ATOM 11 C2' U B 17 -8.869 -25.800 -34.562 1.00 40.17 C
ATOM 12 O2' U B 17 -8.223 -25.909 -33.317 1.00 39.55 O
ATOM 13 C1' U B 17 -8.209 -26.781 -35.526 1.00 38.94 C
ATOM 14 N1 U B 17 -8.263 -26.349 -36.928 1.00 37.38 N
ATOM 15 C2 U B 17 -7.300 -25.466 -37.373 1.00 37.20 C
ATOM 16 O2 U B 17 -6.436 -25.003 -36.646 1.00 36.32 O
ATOM 17 N3 U B 17 -7.384 -25.146 -38.705 1.00 36.70 N
ATOM 18 C4 U B 17 -8.315 -25.611 -39.613 1.00 36.67 C
ATOM 19 O4 U B 17 -8.237 -25.265 -40.789 1.00 36.95 O
ATOM 20 C5 U B 17 -9.286 -26.504 -39.068 1.00 35.88 C
ATOM 21 C6 U B 17 -9.232 -26.830 -37.777 1.00 36.18 C
ATOM 22 P C B 18 -11.555 -24.478 -33.218 1.00 46.44 P
ATOM 23 OP1 C B 18 -12.840 -24.509 -32.484 1.00 47.32 O
ATOM 24 OP2 C B 18 -11.492 -23.821 -34.546 1.00 47.18 O
ATOM 25 O5' C B 18 -10.466 -23.816 -32.278 1.00 45.61 O
TER

Atoms:
OP1: (3.969,-27.155,-28.473)
OP2: (3.752,-27.120,-31.025)
C3': (-0.516,-28.383,-28.670)
C1': (-1.782,-27.205,-30.268)
C5': (0.968,-26.320,-28.492)
O4': (-1.324,-26.241,-29.349)
C8: (-1.166,-26.517,-32.672)
O2': (-1.960,-29.540,-30.297)
C6: (-4.219,-25.436,-34.067)
C5: (-3.075,-25.884,-33.372)
C4: (-3.243,-26.213,-32.042)
P: (3.286,-26.659,-29.687)
C4': (-0.445,-26.880,-28.377)
C2': (-1.015,-28.511,-30.108)
C2: (-5.384,-25.710,-32.094)
N1: (-5.379,-25.360,-33.383)
N3: (-4.383,-26.145,-31.334)
N6: (-4.220,-25.088,-35.356)
N7: (-1.755,-26.075,-33.760)
N9: (-2.015,-26.650,-31.602)
O5': (1.715,-26.945,-29.538)
O3': (-1.119,-29.182,-27.641)
C4: (-8.315,-25.611,-39.613)
N3: (-7.384,-25.146,-38.705)
OP1: (-14.137,-28.780,-36.101)
OP2: (-13.177,-28.020,-38.354)
C2: (-7.300,-25.466,-37.373)
C1': (-8.209,-26.781,-35.526)
C3': (-10.297,-26.327,-34.543)
O5': (-11.765,-28.041,-36.279)
O4': (-8.919,-28.004,-35.418)
C5': (-11.260,-28.622,-35.081)
P: (-12.998,-28.696,-37.045)
C4': (-10.083,-27.824,-34.567)
C2': (-8.869,-25.800,-34.562)
O2': (-8.223,-25.909,-33.317)
N1: (-8.263,-26.349,-36.928)
O4: (-8.237,-25.265,-40.789)
O2: (-6.436,-25.003,-36.646)
C6: (-9.232,-26.830,-37.777)
C5: (-9.286,-26.504,-39.068)
O3': (-11.004,-25.968,-33.376)
Image (generated by PyMOL):
PyMOL image
show in jmol