ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIT:02257:02172

Extra

PDB:
ATOM 1 O3' A A2256 62.778 36.597 75.940 1.00 48.73 O
ATOM 2 P G A2257 63.016 37.991 75.168 1.00 51.05 P
ATOM 3 OP1 G A2257 61.717 38.714 75.231 1.00 50.38 O
ATOM 4 OP2 G A2257 63.645 37.717 73.844 1.00 51.07 O
ATOM 5 O5' G A2257 64.085 38.787 76.047 1.00 50.18 O
ATOM 6 C5' G A2257 63.858 39.032 77.445 1.00 49.87 C
ATOM 7 C4' G A2257 65.173 39.233 78.167 1.00 49.46 C
ATOM 8 O4' G A2257 66.132 38.246 77.699 1.00 48.97 O
ATOM 9 C3' G A2257 65.899 40.544 77.935 1.00 49.69 C
ATOM 10 O3' G A2257 65.362 41.595 78.734 1.00 52.19 O
ATOM 11 C2' G A2257 67.317 40.188 78.358 1.00 48.96 C
ATOM 12 O2' G A2257 67.457 40.142 79.765 1.00 47.92 O
ATOM 13 C1' G A2257 67.446 38.774 77.790 1.00 47.59 C
ATOM 14 N9 G A2257 68.060 38.738 76.463 1.00 46.81 N
ATOM 15 C8 G A2257 67.425 38.614 75.247 1.00 46.52 C
ATOM 16 N7 G A2257 68.251 38.622 74.233 1.00 45.57 N
ATOM 17 C5 G A2257 69.507 38.756 74.811 1.00 45.10 C
ATOM 18 C6 G A2257 70.794 38.829 74.213 1.00 45.63 C
ATOM 19 O6 G A2257 71.091 38.780 73.014 1.00 47.51 O
ATOM 20 N1 G A2257 71.796 38.970 75.167 1.00 43.72 N
ATOM 21 C2 G A2257 71.589 39.028 76.521 1.00 43.80 C
ATOM 22 N2 G A2257 72.683 39.162 77.278 1.00 43.59 N
ATOM 23 N3 G A2257 70.398 38.960 77.093 1.00 43.73 N
ATOM 24 C4 G A2257 69.409 38.826 76.185 1.00 45.33 C
ATOM 25 P C A2258 65.371 43.106 78.176 1.00 53.39 P
ATOM 26 OP1 C A2258 64.402 43.890 78.986 1.00 52.36 O
ATOM 27 OP2 C A2258 65.232 43.070 76.689 1.00 53.30 O
ATOM 28 O5' C A2258 66.839 43.623 78.504 1.00 50.66 O
TER

ATOM 1 O3' U B2171 74.335 40.375 79.449 1.00 56.79 O
ATOM 2 P C B2172 73.865 39.567 80.760 1.00 59.02 P
ATOM 3 OP1 C B2172 72.597 38.880 80.377 1.00 57.23 O
ATOM 4 OP2 C B2172 73.882 40.483 81.935 1.00 58.07 O
ATOM 5 O5' C B2172 74.997 38.463 80.970 1.00 58.06 O
ATOM 6 C5' C B2172 75.118 37.355 80.057 1.00 58.87 C
ATOM 7 C4' C B2172 76.388 36.586 80.323 1.00 59.10 C
ATOM 8 O4' C B2172 77.528 37.474 80.185 1.00 57.95 O
ATOM 9 C3' C B2172 76.553 36.012 81.721 1.00 59.86 C
ATOM 10 O3' C B2172 75.836 34.793 81.881 1.00 61.28 O
ATOM 11 C2' C B2172 78.060 35.813 81.802 1.00 59.01 C
ATOM 12 O2' C B2172 78.512 34.663 81.109 1.00 59.34 O
ATOM 13 C1' C B2172 78.559 37.058 81.067 1.00 57.39 C
ATOM 14 N1 C B2172 78.902 38.170 81.972 1.00 55.12 N
ATOM 15 C2 C B2172 80.180 38.184 82.565 1.00 54.08 C
ATOM 16 O2 C B2172 80.968 37.261 82.317 1.00 52.64 O
ATOM 17 N3 C B2172 80.517 39.203 83.389 1.00 52.69 N
ATOM 18 C4 C B2172 79.645 40.182 83.629 1.00 52.47 C
ATOM 19 N4 C B2172 80.031 41.172 84.431 1.00 51.93 N
ATOM 20 C5 C B2172 78.337 40.192 83.051 1.00 53.04 C
ATOM 21 C6 C B2172 78.010 39.175 82.236 1.00 53.82 C
ATOM 22 P A B2173 75.422 34.293 83.355 1.00 62.51 P
ATOM 23 OP1 A B2173 74.529 33.118 83.140 1.00 62.67 O
ATOM 24 OP2 A B2173 74.935 35.448 84.158 1.00 60.24 O
ATOM 25 O5' A B2173 76.793 33.793 83.995 1.00 58.97 O
TER

Atoms:
OP1: (61.717,38.714,75.231)
OP2: (63.645,37.717,73.844)
C3': (65.899,40.544,77.935)
C1': (67.446,38.774,77.790)
C5': (63.858,39.032,77.445)
O6: (71.091,38.780,73.014)
O4': (66.132,38.246,77.699)
C8: (67.425,38.614,75.247)
C2: (71.589,39.028,76.521)
C6: (70.794,38.829,74.213)
C5: (69.507,38.756,74.811)
C4: (69.409,38.826,76.185)
P: (63.016,37.991,75.168)
C4': (65.173,39.233,78.167)
C2': (67.317,40.188,78.358)
O2': (67.457,40.142,79.765)
N1: (71.796,38.970,75.167)
N2: (72.683,39.162,77.278)
N3: (70.398,38.960,77.093)
N7: (68.251,38.622,74.233)
N9: (68.060,38.738,76.463)
O5': (64.085,38.787,76.047)
O3': (65.362,41.595,78.734)
C2: (80.180,38.184,82.565)
OP1: (72.597,38.880,80.377)
OP2: (73.882,40.483,81.935)
C4: (79.645,40.182,83.629)
O5': (74.997,38.463,80.970)
C3': (76.553,36.012,81.721)
C1': (78.559,37.058,81.067)
O4': (77.528,37.474,80.185)
C5': (75.118,37.355,80.057)
P: (73.865,39.567,80.760)
O2: (80.968,37.261,82.317)
C4': (76.388,36.586,80.323)
C2': (78.060,35.813,81.802)
O2': (78.512,34.663,81.109)
N1: (78.902,38.170,81.972)
N3: (80.517,39.203,83.389)
N4: (80.031,41.172,84.431)
C6: (78.010,39.175,82.236)
C5: (78.337,40.192,83.051)
O3': (75.836,34.793,81.881)
Image (generated by PyMOL):
PyMOL image
show in jmol