Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:02405:02349
Extra
PDB:
ATOM 1 O3' U A2404 71.984 108.165 158.513 1.00 63.46 O
ATOM 2 P G A2405 72.758 108.345 159.909 1.00 63.94 P
ATOM 3 OP1 G A2405 72.178 107.354 160.844 1.00 62.93 O
ATOM 4 OP2 G A2405 72.766 109.783 160.281 1.00 62.92 O
ATOM 5 O5' G A2405 74.243 107.893 159.558 1.00 61.97 O
ATOM 6 C5' G A2405 75.372 108.668 159.986 1.00 64.22 C
ATOM 7 C4' G A2405 76.386 108.758 158.875 1.00 65.67 C
ATOM 8 O4' G A2405 76.838 107.429 158.522 1.00 66.67 O
ATOM 9 C3' G A2405 75.887 109.408 157.596 1.00 66.31 C
ATOM 10 O3' G A2405 76.259 110.789 157.634 1.00 68.28 O
ATOM 11 C2' G A2405 76.627 108.636 156.505 1.00 66.89 C
ATOM 12 O2' G A2405 77.936 109.120 156.289 1.00 66.92 O
ATOM 13 C1' G A2405 76.740 107.242 157.130 1.00 66.77 C
ATOM 14 N9 G A2405 75.660 106.285 156.913 1.00 67.99 N
ATOM 15 C8 G A2405 74.309 106.527 156.939 1.00 68.48 C
ATOM 16 N7 G A2405 73.592 105.440 156.835 1.00 69.68 N
ATOM 17 C5 G A2405 74.525 104.420 156.709 1.00 69.43 C
ATOM 18 C6 G A2405 74.344 103.009 156.587 1.00 69.86 C
ATOM 19 O6 G A2405 73.287 102.363 156.582 1.00 69.81 O
ATOM 20 N1 G A2405 75.562 102.345 156.476 1.00 70.02 N
ATOM 21 C2 G A2405 76.798 102.952 156.490 1.00 69.91 C
ATOM 22 N2 G A2405 77.861 102.138 156.374 1.00 68.68 N
ATOM 23 N3 G A2405 76.978 104.261 156.611 1.00 69.32 N
ATOM 24 C4 G A2405 75.807 104.928 156.720 1.00 68.82 C
ATOM 25 P C A2406 75.353 111.907 156.913 1.00 69.72 P
ATOM 26 OP1 C A2406 74.959 111.391 155.583 1.00 71.52 O
ATOM 27 OP2 C A2406 76.091 113.190 157.012 1.00 69.51 O
ATOM 28 O5' C A2406 74.047 112.031 157.818 1.00 69.90 O
TER
ATOM 1 O3' G B2348 82.175 101.504 153.910 1.00 99.63 O
ATOM 2 P C B2349 82.233 101.515 155.522 1.00101.30 P
ATOM 3 OP1 C B2349 80.956 102.070 156.041 1.00101.44 O
ATOM 4 OP2 C B2349 83.511 102.172 155.884 1.00101.97 O
ATOM 5 O5' C B2349 82.327 99.979 155.950 1.00103.75 O
ATOM 6 C5' C B2349 83.484 99.178 155.619 1.00108.19 C
ATOM 7 C4' C B2349 84.031 98.482 156.853 1.00111.45 C
ATOM 8 O4' C B2349 84.410 99.470 157.841 1.00113.75 O
ATOM 9 C3' C B2349 83.076 97.592 157.638 1.00112.68 C
ATOM 10 O3' C B2349 82.988 96.301 157.027 1.00111.78 O
ATOM 11 C2' C B2349 83.765 97.487 159.003 1.00114.43 C
ATOM 12 O2' C B2349 84.726 96.449 159.069 1.00115.26 O
ATOM 13 C1' C B2349 84.507 98.828 159.100 1.00116.25 C
ATOM 14 N1 C B2349 84.102 99.759 160.182 1.00119.43 N
ATOM 15 C2 C B2349 84.278 99.361 161.531 1.00120.77 C
ATOM 16 O2 C B2349 84.736 98.229 161.781 1.00120.89 O
ATOM 17 N3 C B2349 83.943 100.223 162.522 1.00121.47 N
ATOM 18 C4 C B2349 83.449 101.428 162.223 1.00121.63 C
ATOM 19 N4 C B2349 83.143 102.246 163.237 1.00121.69 N
ATOM 20 C5 C B2349 83.247 101.850 160.873 1.00121.33 C
ATOM 21 C6 C B2349 83.581 100.993 159.895 1.00120.62 C
ATOM 22 P A B2350 81.673 95.395 157.229 1.00111.41 P
ATOM 23 OP1 A B2350 81.979 94.044 156.679 1.00111.25 O
ATOM 24 OP2 A B2350 80.518 96.153 156.699 1.00112.77 O
ATOM 25 O5' A B2350 81.501 95.280 158.809 1.00109.86 O
TER
ATOM 2 P G A2405 72.758 108.345 159.909 1.00 63.94 P
ATOM 3 OP1 G A2405 72.178 107.354 160.844 1.00 62.93 O
ATOM 4 OP2 G A2405 72.766 109.783 160.281 1.00 62.92 O
ATOM 5 O5' G A2405 74.243 107.893 159.558 1.00 61.97 O
ATOM 6 C5' G A2405 75.372 108.668 159.986 1.00 64.22 C
ATOM 7 C4' G A2405 76.386 108.758 158.875 1.00 65.67 C
ATOM 8 O4' G A2405 76.838 107.429 158.522 1.00 66.67 O
ATOM 9 C3' G A2405 75.887 109.408 157.596 1.00 66.31 C
ATOM 10 O3' G A2405 76.259 110.789 157.634 1.00 68.28 O
ATOM 11 C2' G A2405 76.627 108.636 156.505 1.00 66.89 C
ATOM 12 O2' G A2405 77.936 109.120 156.289 1.00 66.92 O
ATOM 13 C1' G A2405 76.740 107.242 157.130 1.00 66.77 C
ATOM 14 N9 G A2405 75.660 106.285 156.913 1.00 67.99 N
ATOM 15 C8 G A2405 74.309 106.527 156.939 1.00 68.48 C
ATOM 16 N7 G A2405 73.592 105.440 156.835 1.00 69.68 N
ATOM 17 C5 G A2405 74.525 104.420 156.709 1.00 69.43 C
ATOM 18 C6 G A2405 74.344 103.009 156.587 1.00 69.86 C
ATOM 19 O6 G A2405 73.287 102.363 156.582 1.00 69.81 O
ATOM 20 N1 G A2405 75.562 102.345 156.476 1.00 70.02 N
ATOM 21 C2 G A2405 76.798 102.952 156.490 1.00 69.91 C
ATOM 22 N2 G A2405 77.861 102.138 156.374 1.00 68.68 N
ATOM 23 N3 G A2405 76.978 104.261 156.611 1.00 69.32 N
ATOM 24 C4 G A2405 75.807 104.928 156.720 1.00 68.82 C
ATOM 25 P C A2406 75.353 111.907 156.913 1.00 69.72 P
ATOM 26 OP1 C A2406 74.959 111.391 155.583 1.00 71.52 O
ATOM 27 OP2 C A2406 76.091 113.190 157.012 1.00 69.51 O
ATOM 28 O5' C A2406 74.047 112.031 157.818 1.00 69.90 O
TER
ATOM 1 O3' G B2348 82.175 101.504 153.910 1.00 99.63 O
ATOM 2 P C B2349 82.233 101.515 155.522 1.00101.30 P
ATOM 3 OP1 C B2349 80.956 102.070 156.041 1.00101.44 O
ATOM 4 OP2 C B2349 83.511 102.172 155.884 1.00101.97 O
ATOM 5 O5' C B2349 82.327 99.979 155.950 1.00103.75 O
ATOM 6 C5' C B2349 83.484 99.178 155.619 1.00108.19 C
ATOM 7 C4' C B2349 84.031 98.482 156.853 1.00111.45 C
ATOM 8 O4' C B2349 84.410 99.470 157.841 1.00113.75 O
ATOM 9 C3' C B2349 83.076 97.592 157.638 1.00112.68 C
ATOM 10 O3' C B2349 82.988 96.301 157.027 1.00111.78 O
ATOM 11 C2' C B2349 83.765 97.487 159.003 1.00114.43 C
ATOM 12 O2' C B2349 84.726 96.449 159.069 1.00115.26 O
ATOM 13 C1' C B2349 84.507 98.828 159.100 1.00116.25 C
ATOM 14 N1 C B2349 84.102 99.759 160.182 1.00119.43 N
ATOM 15 C2 C B2349 84.278 99.361 161.531 1.00120.77 C
ATOM 16 O2 C B2349 84.736 98.229 161.781 1.00120.89 O
ATOM 17 N3 C B2349 83.943 100.223 162.522 1.00121.47 N
ATOM 18 C4 C B2349 83.449 101.428 162.223 1.00121.63 C
ATOM 19 N4 C B2349 83.143 102.246 163.237 1.00121.69 N
ATOM 20 C5 C B2349 83.247 101.850 160.873 1.00121.33 C
ATOM 21 C6 C B2349 83.581 100.993 159.895 1.00120.62 C
ATOM 22 P A B2350 81.673 95.395 157.229 1.00111.41 P
ATOM 23 OP1 A B2350 81.979 94.044 156.679 1.00111.25 O
ATOM 24 OP2 A B2350 80.518 96.153 156.699 1.00112.77 O
ATOM 25 O5' A B2350 81.501 95.280 158.809 1.00109.86 O
TER
Atoms:
OP1: (72.178,107.354,160.844)
OP2: (72.766,109.783,160.281)
C3': (75.887,109.408,157.596)
C1': (76.740,107.242,157.130)
C5': (75.372,108.668,159.986)
O6: (73.287,102.363,156.582)
O4': (76.838,107.429,158.522)
C8: (74.309,106.527,156.939)
C2: (76.798,102.952,156.490)
C6: (74.344,103.009,156.587)
C5: (74.525,104.420,156.709)
C4: (75.807,104.928,156.720)
P: (72.758,108.345,159.909)
C4': (76.386,108.758,158.875)
C2': (76.627,108.636,156.505)
O2': (77.936,109.120,156.289)
N1: (75.562,102.345,156.476)
N2: (77.861,102.138,156.374)
N3: (76.978,104.261,156.611)
N7: (73.592,105.440,156.835)
N9: (75.660,106.285,156.913)
O5': (74.243,107.893,159.558)
O3': (76.259,110.789,157.634)
OP2: (72.766,109.783,160.281)
C3': (75.887,109.408,157.596)
C1': (76.740,107.242,157.130)
C5': (75.372,108.668,159.986)
O6: (73.287,102.363,156.582)
O4': (76.838,107.429,158.522)
C8: (74.309,106.527,156.939)
C2: (76.798,102.952,156.490)
C6: (74.344,103.009,156.587)
C5: (74.525,104.420,156.709)
C4: (75.807,104.928,156.720)
P: (72.758,108.345,159.909)
C4': (76.386,108.758,158.875)
C2': (76.627,108.636,156.505)
O2': (77.936,109.120,156.289)
N1: (75.562,102.345,156.476)
N2: (77.861,102.138,156.374)
N3: (76.978,104.261,156.611)
N7: (73.592,105.440,156.835)
N9: (75.660,106.285,156.913)
O5': (74.243,107.893,159.558)
O3': (76.259,110.789,157.634)
C2: (84.278,99.361,161.531)
OP1: (80.956,102.070,156.041)
OP2: (83.511,102.172,155.884)
C4: (83.449,101.428,162.223)
O5': (82.327,99.979,155.950)
C3': (83.076,97.592,157.638)
C1': (84.507,98.828,159.100)
O4': (84.410,99.470,157.841)
C5': (83.484,99.178,155.619)
P: (82.233,101.515,155.522)
O2: (84.736,98.229,161.781)
C4': (84.031,98.482,156.853)
C2': (83.765,97.487,159.003)
O2': (84.726,96.449,159.069)
N1: (84.102,99.759,160.182)
N3: (83.943,100.223,162.522)
N4: (83.143,102.246,163.237)
C6: (83.581,100.993,159.895)
C5: (83.247,101.850,160.873)
O3': (82.988,96.301,157.027)
OP1: (80.956,102.070,156.041)
OP2: (83.511,102.172,155.884)
C4: (83.449,101.428,162.223)
O5': (82.327,99.979,155.950)
C3': (83.076,97.592,157.638)
C1': (84.507,98.828,159.100)
O4': (84.410,99.470,157.841)
C5': (83.484,99.178,155.619)
P: (82.233,101.515,155.522)
O2: (84.736,98.229,161.781)
C4': (84.031,98.482,156.853)
C2': (83.765,97.487,159.003)
O2': (84.726,96.449,159.069)
N1: (84.102,99.759,160.182)
N3: (83.943,100.223,162.522)
N4: (83.143,102.246,163.237)
C6: (83.581,100.993,159.895)
C5: (83.247,101.850,160.873)
O3': (82.988,96.301,157.027)
Image (generated by PyMOL):