ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3NPQ:B38:B32

Extra

PDB:
ATOM 1 P A A 38 21.470 29.573 6.970 1.00 70.90 P
ATOM 2 OP1 A A 38 20.701 29.725 5.715 1.00 79.05 O
ATOM 3 OP2 A A 38 21.899 28.229 7.417 1.00 64.42 O
ATOM 4 O5' A A 38 22.768 30.506 6.902 1.00 59.42 O
ATOM 5 C5' A A 38 22.640 31.890 6.598 1.00 56.25 C
ATOM 6 C4' A A 38 24.009 32.534 6.475 1.00 59.06 C
ATOM 7 O4' A A 38 24.616 32.653 7.786 1.00 57.79 O
ATOM 8 C3' A A 38 25.006 31.738 5.648 1.00 65.27 C
ATOM 9 O3' A A 38 24.884 32.081 4.275 1.00 67.55 O
ATOM 10 C2' A A 38 26.338 32.201 6.227 1.00 58.70 C
ATOM 11 O2' A A 38 26.758 33.441 5.692 1.00 60.16 O
ATOM 12 C1' A A 38 25.996 32.351 7.707 1.00 55.35 C
ATOM 13 N9 A A 38 26.251 31.146 8.490 1.00 51.95 N
ATOM 14 C8 A A 38 25.322 30.274 8.986 1.00 53.01 C
ATOM 15 N7 A A 38 25.841 29.272 9.656 1.00 52.52 N
ATOM 16 C5 A A 38 27.205 29.503 9.595 1.00 53.20 C
ATOM 17 C6 A A 38 28.311 28.800 10.112 1.00 54.52 C
ATOM 18 N6 A A 38 28.200 27.673 10.822 1.00 47.94 N
ATOM 19 N1 A A 38 29.539 29.303 9.868 1.00 56.84 N
ATOM 20 C2 A A 38 29.648 30.431 9.157 1.00 54.05 C
ATOM 21 N3 A A 38 28.684 31.178 8.621 1.00 57.47 N
ATOM 22 C4 A A 38 27.475 30.654 8.879 1.00 56.68 C
ATOM 23 P A A 39 24.908 30.927 3.167 1.00 40.45 P
ATOM 24 OP1 A A 39 24.474 31.521 1.884 1.00 52.67 O
ATOM 25 OP2 A A 39 24.201 29.749 3.717 1.00 40.92 O
ATOM 26 O5' A A 39 26.462 30.566 3.070 1.00 44.28 O
TER

ATOM 1 O3' C B 31 38.054 24.972 10.995 1.00 38.55 O
ATOM 2 P U B 32 37.962 26.058 12.167 1.00 31.13 P
ATOM 3 OP1 U B 32 39.075 27.014 11.988 1.00 47.42 O
ATOM 4 OP2 U B 32 37.804 25.339 13.451 1.00 34.71 O
ATOM 5 O5' U B 32 36.586 26.806 11.846 1.00 28.37 O
ATOM 6 C5' U B 32 36.399 27.422 10.580 1.00 34.76 C
ATOM 7 C4' U B 32 34.941 27.788 10.384 1.00 32.63 C
ATOM 8 O4' U B 32 34.144 26.584 10.256 1.00 30.86 O
ATOM 9 C3' U B 32 34.310 28.526 11.553 1.00 32.26 C
ATOM 10 O3' U B 32 34.611 29.912 11.489 1.00 34.88 O
ATOM 11 C2' U B 32 32.834 28.255 11.295 1.00 34.67 C
ATOM 12 O2' U B 32 32.312 29.073 10.267 1.00 39.46 O
ATOM 13 C1' U B 32 32.871 26.798 10.839 1.00 34.39 C
ATOM 14 N1 U B 32 32.673 25.823 11.952 1.00 32.32 N
ATOM 15 C2 U B 32 31.393 25.538 12.377 1.00 20.46 C
ATOM 16 O2 U B 32 30.400 26.046 11.888 1.00 22.95 O
ATOM 17 N3 U B 32 31.313 24.631 13.404 1.00 18.61 N
ATOM 18 C4 U B 32 32.365 23.993 14.036 1.00 21.61 C
ATOM 19 O4 U B 32 32.139 23.201 14.945 1.00 23.13 O
ATOM 20 C5 U B 32 33.670 24.342 13.537 1.00 25.47 C
ATOM 21 C6 U B 32 33.771 25.224 12.536 1.00 29.77 C
ATOM 22 P C B 33 34.833 30.735 12.844 1.00 45.35 P
ATOM 23 OP1 C B 33 35.430 32.041 12.489 1.00 54.37 O
ATOM 24 OP2 C B 33 35.514 29.849 13.814 1.00 45.18 O
ATOM 25 O5' C B 33 33.338 30.970 13.359 1.00 39.04 O
TER

Atoms:
OP1: (20.701,29.725,5.715)
OP2: (21.899,28.229,7.417)
C3': (25.006,31.738,5.648)
C1': (25.996,32.351,7.707)
C5': (22.640,31.890,6.598)
O4': (24.616,32.653,7.786)
C8: (25.322,30.274,8.986)
O2': (26.758,33.441,5.692)
C6: (28.311,28.800,10.112)
C5: (27.205,29.503,9.595)
C4: (27.475,30.654,8.879)
P: (21.470,29.573,6.970)
C4': (24.009,32.534,6.475)
C2': (26.338,32.201,6.227)
C2: (29.648,30.431,9.157)
N1: (29.539,29.303,9.868)
N3: (28.684,31.178,8.621)
N6: (28.200,27.673,10.822)
N7: (25.841,29.272,9.656)
N9: (26.251,31.146,8.490)
O5': (22.768,30.506,6.902)
O3': (24.884,32.081,4.275)
C4: (32.365,23.993,14.036)
N3: (31.313,24.631,13.404)
OP1: (39.075,27.014,11.988)
OP2: (37.804,25.339,13.451)
C2: (31.393,25.538,12.377)
C1': (32.871,26.798,10.839)
C3': (34.310,28.526,11.553)
O5': (36.586,26.806,11.846)
O4': (34.144,26.584,10.256)
C5': (36.399,27.422,10.580)
P: (37.962,26.058,12.167)
C4': (34.941,27.788,10.384)
C2': (32.834,28.255,11.295)
O2': (32.312,29.073,10.267)
N1: (32.673,25.823,11.952)
O4: (32.139,23.201,14.945)
O2: (30.400,26.046,11.888)
C6: (33.771,25.224,12.536)
C5: (33.670,24.342,13.537)
O3': (34.611,29.912,11.489)
Image (generated by PyMOL):
PyMOL image
show in jmol