ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2VQF:A185:A120

Extra

PDB:
ATOM 1 O3' U A 184 105.030 71.849 -30.933 1.00 73.08 O
ATOM 2 P G A 185 103.801 70.842 -30.724 1.00 73.84 P
ATOM 3 OP1 G A 185 104.120 69.557 -31.426 1.00 72.78 O
ATOM 4 OP2 G A 185 102.598 71.610 -31.099 1.00 75.98 O
ATOM 5 O5' G A 185 103.775 70.571 -29.149 1.00 73.33 O
ATOM 6 C5' G A 185 102.639 69.935 -28.533 1.00 72.33 C
ATOM 7 C4' G A 185 103.090 68.914 -27.515 1.00 71.56 C
ATOM 8 O4' G A 185 104.076 68.048 -28.134 1.00 71.37 O
ATOM 9 C3' G A 185 103.731 69.442 -26.228 1.00 71.50 C
ATOM 10 O3' G A 185 103.408 68.559 -25.167 1.00 71.97 O
ATOM 11 C2' G A 185 105.223 69.239 -26.481 1.00 71.27 C
ATOM 12 O2' G A 185 105.978 69.015 -25.309 1.00 71.04 O
ATOM 13 C1' G A 185 105.189 67.948 -27.279 1.00 71.19 C
ATOM 14 N9 G A 185 106.381 67.583 -28.037 1.00 70.69 N
ATOM 15 C8 G A 185 106.699 67.895 -29.338 1.00 71.75 C
ATOM 16 N7 G A 185 107.805 67.329 -29.743 1.00 71.43 N
ATOM 17 C5 G A 185 108.250 66.619 -28.636 1.00 70.20 C
ATOM 18 C6 G A 185 109.379 65.790 -28.475 1.00 69.99 C
ATOM 19 O6 G A 185 110.246 65.500 -29.308 1.00 71.36 O
ATOM 20 N1 G A 185 109.444 65.265 -27.188 1.00 68.80 N
ATOM 21 C2 G A 185 108.535 65.506 -26.188 1.00 67.34 C
ATOM 22 N2 G A 185 108.761 64.907 -25.016 1.00 66.49 N
ATOM 23 N3 G A 185 107.480 66.276 -26.328 1.00 67.53 N
ATOM 24 C4 G A 185 107.396 66.791 -27.570 1.00 69.69 C
ATOM 25 P G A 186 102.006 68.681 -24.398 1.00 73.00 P
ATOM 26 OP1 G A 186 102.282 68.072 -23.057 1.00 73.40 O
ATOM 27 OP2 G A 186 100.940 68.118 -25.266 1.00 72.53 O
ATOM 28 O5' G A 186 101.768 70.241 -24.204 1.00 73.44 O
TER

ATOM 1 O3' A B 119 108.846 67.593 -23.557 1.00 64.52 O
ATOM 2 P C B 120 107.738 67.168 -22.472 1.00 64.08 P
ATOM 3 OP1 C B 120 107.787 65.684 -22.448 1.00 63.20 O
ATOM 4 OP2 C B 120 106.458 67.861 -22.748 1.00 63.81 O
ATOM 5 O5' C B 120 108.342 67.700 -21.087 1.00 63.45 O
ATOM 6 C5' C B 120 107.889 67.192 -19.821 1.00 61.45 C
ATOM 7 C4' C B 120 109.023 66.500 -19.096 1.00 60.75 C
ATOM 8 O4' C B 120 110.210 67.338 -19.082 1.00 60.11 O
ATOM 9 C3' C B 120 108.763 66.195 -17.632 1.00 60.53 C
ATOM 10 O3' C B 120 108.035 65.001 -17.476 1.00 63.55 O
ATOM 11 C2' C B 120 110.170 66.093 -17.055 1.00 58.85 C
ATOM 12 O2' C B 120 110.759 64.830 -17.285 1.00 57.33 O
ATOM 13 C1' C B 120 110.917 67.160 -17.860 1.00 57.48 C
ATOM 14 N1 C B 120 110.986 68.462 -17.150 1.00 55.03 N
ATOM 15 C2 C B 120 111.763 68.573 -15.973 1.00 54.63 C
ATOM 16 O2 C B 120 112.424 67.597 -15.582 1.00 56.22 O
ATOM 17 N3 C B 120 111.771 69.742 -15.297 1.00 51.69 N
ATOM 18 C4 C B 120 111.056 70.773 -15.745 1.00 50.44 C
ATOM 19 N4 C B 120 111.064 71.897 -15.029 1.00 49.42 N
ATOM 20 C5 C B 120 110.294 70.700 -16.944 1.00 49.87 C
ATOM 21 C6 C B 120 110.290 69.543 -17.609 1.00 52.43 C
ATOM 22 P C B 121 106.891 64.910 -16.348 1.00 64.97 P
ATOM 23 OP1 C B 121 105.937 63.906 -16.896 1.00 64.87 O
ATOM 24 OP2 C B 121 106.448 66.280 -16.016 1.00 63.01 O
ATOM 25 O5' C B 121 107.635 64.292 -15.084 1.00 65.72 O
TER

Atoms:
OP1: (104.120,69.557,-31.426)
OP2: (102.598,71.610,-31.099)
C3': (103.731,69.442,-26.228)
C1': (105.189,67.948,-27.279)
C5': (102.639,69.935,-28.533)
O6: (110.246,65.500,-29.308)
O4': (104.076,68.048,-28.134)
C8: (106.699,67.895,-29.338)
C2: (108.535,65.506,-26.188)
C6: (109.379,65.790,-28.475)
C5: (108.250,66.619,-28.636)
C4: (107.396,66.791,-27.570)
P: (103.801,70.842,-30.724)
C4': (103.090,68.914,-27.515)
C2': (105.223,69.239,-26.481)
O2': (105.978,69.015,-25.309)
N1: (109.444,65.265,-27.188)
N2: (108.761,64.907,-25.016)
N3: (107.480,66.276,-26.328)
N7: (107.805,67.329,-29.743)
N9: (106.381,67.583,-28.037)
O5': (103.775,70.571,-29.149)
O3': (103.408,68.559,-25.167)
C2: (111.763,68.573,-15.973)
OP1: (107.787,65.684,-22.448)
OP2: (106.458,67.861,-22.748)
C4: (111.056,70.773,-15.745)
O5': (108.342,67.700,-21.087)
C3': (108.763,66.195,-17.632)
C1': (110.917,67.160,-17.860)
O4': (110.210,67.338,-19.082)
C5': (107.889,67.192,-19.821)
P: (107.738,67.168,-22.472)
O2: (112.424,67.597,-15.582)
C4': (109.023,66.500,-19.096)
C2': (110.170,66.093,-17.055)
O2': (110.759,64.830,-17.285)
N1: (110.986,68.462,-17.150)
N3: (111.771,69.742,-15.297)
N4: (111.064,71.897,-15.029)
C6: (110.290,69.543,-17.609)
C5: (110.294,70.700,-16.944)
O3': (108.035,65.001,-17.476)
Image (generated by PyMOL):
PyMOL image
show in jmol