ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:0606:0526

Extra

PDB:
ATOM 1 O3' C A 605 26.284 111.222 102.289 1.00 41.17 O
ATOM 2 P G A 606 27.657 111.793 102.903 1.00 42.70 P
ATOM 3 OP1 G A 606 28.585 110.637 102.992 1.00 42.68 O
ATOM 4 OP2 G A 606 27.360 112.597 104.116 1.00 41.24 O
ATOM 5 O5' G A 606 28.186 112.792 101.781 1.00 41.59 O
ATOM 6 C5' G A 606 28.470 112.315 100.452 1.00 40.98 C
ATOM 7 C4' G A 606 28.751 113.472 99.533 1.00 39.18 C
ATOM 8 O4' G A 606 27.572 114.308 99.420 1.00 37.96 O
ATOM 9 C3' G A 606 29.807 114.427 100.036 1.00 39.86 C
ATOM 10 O3' G A 606 31.108 113.928 99.806 1.00 40.93 O
ATOM 11 C2' G A 606 29.493 115.699 99.265 1.00 39.32 C
ATOM 12 O2' G A 606 29.983 115.702 97.941 1.00 39.51 O
ATOM 13 C1' G A 606 27.965 115.660 99.254 1.00 37.66 C
ATOM 14 N9 G A 606 27.385 116.451 100.331 1.00 35.32 N
ATOM 15 C8 G A 606 26.981 116.019 101.568 1.00 34.69 C
ATOM 16 N7 G A 606 26.513 116.981 102.316 1.00 34.61 N
ATOM 17 C5 G A 606 26.614 118.112 101.522 1.00 34.36 C
ATOM 18 C6 G A 606 26.262 119.456 101.791 1.00 35.64 C
ATOM 19 O6 G A 606 25.767 119.939 102.818 1.00 37.32 O
ATOM 20 N1 G A 606 26.541 120.278 100.710 1.00 35.97 N
ATOM 21 C2 G A 606 27.088 119.863 99.526 1.00 36.31 C
ATOM 22 N2 G A 606 27.303 120.816 98.615 1.00 39.83 N
ATOM 23 N3 G A 606 27.408 118.615 99.257 1.00 34.70 N
ATOM 24 C4 G A 606 27.149 117.799 100.295 1.00 34.63 C
ATOM 25 P U A 607 32.264 114.241 100.865 1.00 42.30 P
ATOM 26 OP1 U A 607 33.050 112.997 101.010 1.00 41.85 O
ATOM 27 OP2 U A 607 31.659 114.880 102.069 1.00 43.01 O
ATOM 28 O5' U A 607 33.152 115.348 100.146 1.00 42.25 O
TER

ATOM 1 O3' G B 525 30.118 121.457 95.109 1.00 37.38 O
ATOM 2 P C B 526 28.553 121.825 95.114 1.00 37.49 P
ATOM 3 OP1 C B 526 27.840 120.865 95.978 1.00 37.42 O
ATOM 4 OP2 C B 526 28.148 121.969 93.696 1.00 38.16 O
ATOM 5 O5' C B 526 28.491 123.273 95.771 1.00 36.16 O
ATOM 6 C5' C B 526 27.262 123.785 96.321 1.00 37.43 C
ATOM 7 C4' C B 526 26.943 125.157 95.751 1.00 38.39 C
ATOM 8 O4' C B 526 27.937 126.139 96.130 1.00 38.54 O
ATOM 9 C3' C B 526 26.854 125.267 94.243 1.00 39.12 C
ATOM 10 O3' C B 526 26.001 126.369 93.919 1.00 42.39 O
ATOM 11 C2' C B 526 28.306 125.543 93.865 1.00 38.29 C
ATOM 12 O2' C B 526 28.431 126.209 92.629 1.00 37.95 O
ATOM 13 C1' C B 526 28.781 126.426 95.025 1.00 39.18 C
ATOM 14 N1 C B 526 30.179 126.158 95.447 1.00 40.85 N
ATOM 15 C2 C B 526 31.241 126.382 94.550 1.00 39.59 C
ATOM 16 O2 C B 526 31.007 126.842 93.430 1.00 39.24 O
ATOM 17 N3 C B 526 32.498 126.092 94.939 1.00 39.86 N
ATOM 18 C4 C B 526 32.726 125.614 96.162 1.00 40.20 C
ATOM 19 N4 C B 526 33.982 125.323 96.496 1.00 40.88 N
ATOM 20 C5 C B 526 31.678 125.405 97.097 1.00 40.53 C
ATOM 21 C6 C B 526 30.436 125.682 96.704 1.00 40.82 C
ATOM 22 P G B 527 24.436 126.121 93.626 1.00 42.03 P
ATOM 23 OP1 G B 527 23.847 127.381 93.101 1.00 41.79 O
ATOM 24 OP2 G B 527 23.831 125.465 94.808 1.00 40.16 O
ATOM 25 O5' G B 527 24.436 125.055 92.456 1.00 41.12 O
TER

Atoms:
OP1: (28.585,110.637,102.992)
OP2: (27.360,112.597,104.116)
C3': (29.807,114.427,100.036)
C1': (27.965,115.660,99.254)
C5': (28.470,112.315,100.452)
O6: (25.767,119.939,102.818)
O4': (27.572,114.308,99.420)
C8: (26.981,116.019,101.568)
C2: (27.088,119.863,99.526)
C6: (26.262,119.456,101.791)
C5: (26.614,118.112,101.522)
C4: (27.149,117.799,100.295)
P: (27.657,111.793,102.903)
C4': (28.751,113.472,99.533)
C2': (29.493,115.699,99.265)
O2': (29.983,115.702,97.941)
N1: (26.541,120.278,100.710)
N2: (27.303,120.816,98.615)
N3: (27.408,118.615,99.257)
N7: (26.513,116.981,102.316)
N9: (27.385,116.451,100.331)
O5': (28.186,112.792,101.781)
O3': (31.108,113.928,99.806)
C2: (31.241,126.382,94.550)
OP1: (27.840,120.865,95.978)
OP2: (28.148,121.969,93.696)
C4: (32.726,125.614,96.162)
O5': (28.491,123.273,95.771)
C3': (26.854,125.267,94.243)
C1': (28.781,126.426,95.025)
O4': (27.937,126.139,96.130)
C5': (27.262,123.785,96.321)
P: (28.553,121.825,95.114)
O2: (31.007,126.842,93.430)
C4': (26.943,125.157,95.751)
C2': (28.306,125.543,93.865)
O2': (28.431,126.209,92.629)
N1: (30.179,126.158,95.447)
N3: (32.498,126.092,94.939)
N4: (33.982,125.323,96.496)
C6: (30.436,125.682,96.704)
C5: (31.678,125.405,97.097)
O3': (26.001,126.369,93.919)
Image (generated by PyMOL):
PyMOL image
show in jmol