Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11412:11824
Extra
PDB:
ATOM 1 O3' A A1411 53.969 54.540 89.427 1.00 65.28 O
ATOM 2 P A A1412 53.826 54.179 87.863 1.00 70.35 P
ATOM 3 OP1 A A1412 54.483 52.847 87.636 1.00 69.82 O
ATOM 4 OP2 A A1412 54.313 55.386 87.108 1.00 70.73 O
ATOM 5 O5' A A1412 52.263 54.023 87.684 1.00 70.20 O
ATOM 6 C5' A A1412 51.401 55.133 87.825 1.00 70.64 C
ATOM 7 C4' A A1412 50.007 54.668 88.083 1.00 70.45 C
ATOM 8 O4' A A1412 49.565 53.880 86.969 1.00 69.94 O
ATOM 9 C3' A A1412 49.853 53.766 89.294 1.00 70.29 C
ATOM 10 O3' A A1412 49.575 54.515 90.465 1.00 70.80 O
ATOM 11 C2' A A1412 48.726 52.798 88.922 1.00 69.82 C
ATOM 12 O2' A A1412 47.486 53.271 89.414 1.00 70.07 O
ATOM 13 C1' A A1412 48.695 52.869 87.396 1.00 69.59 C
ATOM 14 N9 A A1412 49.061 51.606 86.729 1.00 69.00 N
ATOM 15 C8 A A1412 49.948 51.500 85.701 1.00 68.82 C
ATOM 16 N7 A A1412 50.057 50.297 85.232 1.00 68.29 N
ATOM 17 C5 A A1412 49.164 49.573 85.976 1.00 68.12 C
ATOM 18 C6 A A1412 48.828 48.220 85.930 1.00 67.60 C
ATOM 19 N6 A A1412 49.375 47.347 85.077 1.00 67.18 N
ATOM 20 N1 A A1412 47.908 47.789 86.806 1.00 67.57 N
ATOM 21 C2 A A1412 47.383 48.695 87.640 1.00 68.02 C
ATOM 22 N3 A A1412 47.612 49.998 87.769 1.00 68.53 N
ATOM 23 C4 A A1412 48.530 50.372 86.888 1.00 68.54 C
ATOM 24 P C A1413 50.445 54.308 91.797 1.00 57.59 P
ATOM 25 OP1 C A1413 50.076 55.424 92.728 1.00 58.22 O
ATOM 26 OP2 C A1413 51.862 54.136 91.367 1.00 57.49 O
ATOM 27 O5' C A1413 49.878 52.941 92.368 1.00 57.14 O
TER
ATOM 1 O3' A B1823 41.317 41.317 89.280 1.00 79.38 O
ATOM 2 P U B1824 42.680 40.752 88.672 1.00 55.50 P
ATOM 3 OP1 U B1824 42.294 39.996 87.433 1.00 55.07 O
ATOM 4 OP2 U B1824 43.406 40.035 89.770 1.00 55.46 O
ATOM 5 O5' U B1824 43.470 42.064 88.286 1.00 55.86 O
ATOM 6 C5' U B1824 43.590 42.467 86.935 1.00 55.78 C
ATOM 7 C4' U B1824 44.739 43.411 86.768 1.00 56.07 C
ATOM 8 O4' U B1824 45.817 42.751 86.081 1.00 55.76 O
ATOM 9 C3' U B1824 44.484 44.609 85.911 1.00 56.35 C
ATOM 10 O3' U B1824 43.730 45.605 86.542 1.00 56.78 O
ATOM 11 C2' U B1824 45.880 45.041 85.575 1.00 56.45 C
ATOM 12 O2' U B1824 46.499 45.593 86.715 1.00 56.83 O
ATOM 13 C1' U B1824 46.511 43.695 85.306 1.00 55.97 C
ATOM 14 N1 U B1824 46.398 43.314 83.902 1.00 55.64 N
ATOM 15 C2 U B1824 47.360 43.857 83.113 1.00 55.73 C
ATOM 16 O2 U B1824 48.190 44.599 83.562 1.00 56.05 O
ATOM 17 N3 U B1824 47.302 43.512 81.810 1.00 55.44 N
ATOM 18 C4 U B1824 46.390 42.665 81.243 1.00 55.08 C
ATOM 19 O4 U B1824 46.476 42.442 80.054 1.00 54.87 O
ATOM 20 C5 U B1824 45.416 42.126 82.131 1.00 55.01 C
ATOM 21 C6 U B1824 45.439 42.468 83.418 1.00 55.29 C
ATOM 22 P A B1825 42.664 46.408 85.665 1.00 55.87 P
ATOM 23 OP1 A B1825 41.906 47.292 86.577 1.00 56.32 O
ATOM 24 OP2 A B1825 41.928 45.385 84.860 1.00 55.40 O
ATOM 25 O5' A B1825 43.586 47.295 84.723 1.00 56.04 O
TER
ATOM 2 P A A1412 53.826 54.179 87.863 1.00 70.35 P
ATOM 3 OP1 A A1412 54.483 52.847 87.636 1.00 69.82 O
ATOM 4 OP2 A A1412 54.313 55.386 87.108 1.00 70.73 O
ATOM 5 O5' A A1412 52.263 54.023 87.684 1.00 70.20 O
ATOM 6 C5' A A1412 51.401 55.133 87.825 1.00 70.64 C
ATOM 7 C4' A A1412 50.007 54.668 88.083 1.00 70.45 C
ATOM 8 O4' A A1412 49.565 53.880 86.969 1.00 69.94 O
ATOM 9 C3' A A1412 49.853 53.766 89.294 1.00 70.29 C
ATOM 10 O3' A A1412 49.575 54.515 90.465 1.00 70.80 O
ATOM 11 C2' A A1412 48.726 52.798 88.922 1.00 69.82 C
ATOM 12 O2' A A1412 47.486 53.271 89.414 1.00 70.07 O
ATOM 13 C1' A A1412 48.695 52.869 87.396 1.00 69.59 C
ATOM 14 N9 A A1412 49.061 51.606 86.729 1.00 69.00 N
ATOM 15 C8 A A1412 49.948 51.500 85.701 1.00 68.82 C
ATOM 16 N7 A A1412 50.057 50.297 85.232 1.00 68.29 N
ATOM 17 C5 A A1412 49.164 49.573 85.976 1.00 68.12 C
ATOM 18 C6 A A1412 48.828 48.220 85.930 1.00 67.60 C
ATOM 19 N6 A A1412 49.375 47.347 85.077 1.00 67.18 N
ATOM 20 N1 A A1412 47.908 47.789 86.806 1.00 67.57 N
ATOM 21 C2 A A1412 47.383 48.695 87.640 1.00 68.02 C
ATOM 22 N3 A A1412 47.612 49.998 87.769 1.00 68.53 N
ATOM 23 C4 A A1412 48.530 50.372 86.888 1.00 68.54 C
ATOM 24 P C A1413 50.445 54.308 91.797 1.00 57.59 P
ATOM 25 OP1 C A1413 50.076 55.424 92.728 1.00 58.22 O
ATOM 26 OP2 C A1413 51.862 54.136 91.367 1.00 57.49 O
ATOM 27 O5' C A1413 49.878 52.941 92.368 1.00 57.14 O
TER
ATOM 1 O3' A B1823 41.317 41.317 89.280 1.00 79.38 O
ATOM 2 P U B1824 42.680 40.752 88.672 1.00 55.50 P
ATOM 3 OP1 U B1824 42.294 39.996 87.433 1.00 55.07 O
ATOM 4 OP2 U B1824 43.406 40.035 89.770 1.00 55.46 O
ATOM 5 O5' U B1824 43.470 42.064 88.286 1.00 55.86 O
ATOM 6 C5' U B1824 43.590 42.467 86.935 1.00 55.78 C
ATOM 7 C4' U B1824 44.739 43.411 86.768 1.00 56.07 C
ATOM 8 O4' U B1824 45.817 42.751 86.081 1.00 55.76 O
ATOM 9 C3' U B1824 44.484 44.609 85.911 1.00 56.35 C
ATOM 10 O3' U B1824 43.730 45.605 86.542 1.00 56.78 O
ATOM 11 C2' U B1824 45.880 45.041 85.575 1.00 56.45 C
ATOM 12 O2' U B1824 46.499 45.593 86.715 1.00 56.83 O
ATOM 13 C1' U B1824 46.511 43.695 85.306 1.00 55.97 C
ATOM 14 N1 U B1824 46.398 43.314 83.902 1.00 55.64 N
ATOM 15 C2 U B1824 47.360 43.857 83.113 1.00 55.73 C
ATOM 16 O2 U B1824 48.190 44.599 83.562 1.00 56.05 O
ATOM 17 N3 U B1824 47.302 43.512 81.810 1.00 55.44 N
ATOM 18 C4 U B1824 46.390 42.665 81.243 1.00 55.08 C
ATOM 19 O4 U B1824 46.476 42.442 80.054 1.00 54.87 O
ATOM 20 C5 U B1824 45.416 42.126 82.131 1.00 55.01 C
ATOM 21 C6 U B1824 45.439 42.468 83.418 1.00 55.29 C
ATOM 22 P A B1825 42.664 46.408 85.665 1.00 55.87 P
ATOM 23 OP1 A B1825 41.906 47.292 86.577 1.00 56.32 O
ATOM 24 OP2 A B1825 41.928 45.385 84.860 1.00 55.40 O
ATOM 25 O5' A B1825 43.586 47.295 84.723 1.00 56.04 O
TER
Atoms:
OP1: (54.483,52.847,87.636)
OP2: (54.313,55.386,87.108)
C3': (49.853,53.766,89.294)
C1': (48.695,52.869,87.396)
C5': (51.401,55.133,87.825)
O4': (49.565,53.880,86.969)
C8: (49.948,51.500,85.701)
O2': (47.486,53.271,89.414)
C6: (48.828,48.220,85.930)
C5: (49.164,49.573,85.976)
C4: (48.530,50.372,86.888)
P: (53.826,54.179,87.863)
C4': (50.007,54.668,88.083)
C2': (48.726,52.798,88.922)
C2: (47.383,48.695,87.640)
N1: (47.908,47.789,86.806)
N3: (47.612,49.998,87.769)
N6: (49.375,47.347,85.077)
N7: (50.057,50.297,85.232)
N9: (49.061,51.606,86.729)
O5': (52.263,54.023,87.684)
O3': (49.575,54.515,90.465)
OP2: (54.313,55.386,87.108)
C3': (49.853,53.766,89.294)
C1': (48.695,52.869,87.396)
C5': (51.401,55.133,87.825)
O4': (49.565,53.880,86.969)
C8: (49.948,51.500,85.701)
O2': (47.486,53.271,89.414)
C6: (48.828,48.220,85.930)
C5: (49.164,49.573,85.976)
C4: (48.530,50.372,86.888)
P: (53.826,54.179,87.863)
C4': (50.007,54.668,88.083)
C2': (48.726,52.798,88.922)
C2: (47.383,48.695,87.640)
N1: (47.908,47.789,86.806)
N3: (47.612,49.998,87.769)
N6: (49.375,47.347,85.077)
N7: (50.057,50.297,85.232)
N9: (49.061,51.606,86.729)
O5': (52.263,54.023,87.684)
O3': (49.575,54.515,90.465)
C4: (46.390,42.665,81.243)
N3: (47.302,43.512,81.810)
OP1: (42.294,39.996,87.433)
OP2: (43.406,40.035,89.770)
C2: (47.360,43.857,83.113)
C1': (46.511,43.695,85.306)
C3': (44.484,44.609,85.911)
O5': (43.470,42.064,88.286)
O4': (45.817,42.751,86.081)
C5': (43.590,42.467,86.935)
P: (42.680,40.752,88.672)
C4': (44.739,43.411,86.768)
C2': (45.880,45.041,85.575)
O2': (46.499,45.593,86.715)
N1: (46.398,43.314,83.902)
O4: (46.476,42.442,80.054)
O2: (48.190,44.599,83.562)
C6: (45.439,42.468,83.418)
C5: (45.416,42.126,82.131)
O3': (43.730,45.605,86.542)
N3: (47.302,43.512,81.810)
OP1: (42.294,39.996,87.433)
OP2: (43.406,40.035,89.770)
C2: (47.360,43.857,83.113)
C1': (46.511,43.695,85.306)
C3': (44.484,44.609,85.911)
O5': (43.470,42.064,88.286)
O4': (45.817,42.751,86.081)
C5': (43.590,42.467,86.935)
P: (42.680,40.752,88.672)
C4': (44.739,43.411,86.768)
C2': (45.880,45.041,85.575)
O2': (46.499,45.593,86.715)
N1: (46.398,43.314,83.902)
O4: (46.476,42.442,80.054)
O2: (48.190,44.599,83.562)
C6: (45.439,42.468,83.418)
C5: (45.416,42.126,82.131)
O3': (43.730,45.605,86.542)
Image (generated by PyMOL):