Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A2828:A2871
Extra
PDB:
ATOM 1 O3' A A2827 -13.516 76.644 202.309 1.00 15.20 O
ATOM 2 P U A2828 -14.961 77.344 202.266 1.00 11.49 P
ATOM 3 OP1 U A2828 -15.787 76.730 203.354 1.00 11.49 O
ATOM 4 OP2 U A2828 -15.449 77.248 200.858 1.00 11.49 O
ATOM 5 O5' U A2828 -14.629 78.870 202.616 1.00 11.49 O
ATOM 6 C5' U A2828 -15.485 79.923 202.162 1.00 11.49 C
ATOM 7 C4' U A2828 -14.766 81.256 202.058 1.00 11.49 C
ATOM 8 O4' U A2828 -14.213 81.617 203.343 1.00 11.49 O
ATOM 9 C3' U A2828 -13.578 81.315 201.111 1.00 11.49 C
ATOM 10 O3' U A2828 -13.951 81.522 199.761 1.00 11.49 O
ATOM 11 C2' U A2828 -12.771 82.456 201.685 1.00 11.49 C
ATOM 12 O2' U A2828 -13.340 83.698 201.340 1.00 11.49 O
ATOM 13 C1' U A2828 -12.967 82.235 203.170 1.00 11.49 C
ATOM 14 N1 U A2828 -11.943 81.349 203.698 1.00 11.52 N
ATOM 15 C2 U A2828 -10.669 81.897 203.798 1.00 11.52 C
ATOM 16 O2 U A2828 -10.392 83.072 203.500 1.00 11.52 O
ATOM 17 N3 U A2828 -9.742 81.005 204.268 1.00 11.52 N
ATOM 18 C4 U A2828 -9.971 79.697 204.609 1.00 11.52 C
ATOM 19 O4 U A2828 -9.020 79.063 205.031 1.00 11.52 O
ATOM 20 C5 U A2828 -11.306 79.209 204.453 1.00 11.52 C
ATOM 21 C6 U A2828 -12.235 80.044 204.002 1.00 11.52 C
ATOM 22 P A A2829 -13.303 80.634 198.579 1.00 2.16 P
ATOM 23 OP1 A A2829 -14.329 80.535 197.518 1.00 2.16 O
ATOM 24 OP2 A A2829 -12.788 79.375 199.200 1.00 2.16 O
ATOM 25 O5' A A2829 -12.090 81.528 198.084 1.00 2.16 O
TER
ATOM 1 O3' U B2870 -3.179 69.945 205.530 1.00 21.10 O
ATOM 2 P A B2871 -3.851 70.691 206.784 1.00 12.88 P
ATOM 3 OP1 A B2871 -3.356 70.008 208.011 1.00 12.88 O
ATOM 4 OP2 A B2871 -5.337 70.738 206.537 1.00 12.88 O
ATOM 5 O5' A B2871 -3.220 72.150 206.698 1.00 12.88 O
ATOM 6 C5' A B2871 -2.611 72.738 207.838 1.00 12.88 C
ATOM 7 C4' A B2871 -2.090 74.115 207.542 1.00 12.88 C
ATOM 8 O4' A B2871 -3.049 74.828 206.719 1.00 12.88 O
ATOM 9 C3' A B2871 -1.858 74.986 208.772 1.00 12.88 C
ATOM 10 O3' A B2871 -0.728 75.816 208.582 1.00 12.88 O
ATOM 11 C2' A B2871 -3.093 75.862 208.806 1.00 12.88 C
ATOM 12 O2' A B2871 -2.908 77.087 209.476 1.00 12.88 O
ATOM 13 C1' A B2871 -3.344 76.069 207.324 1.00 12.88 C
ATOM 14 N9 A B2871 -4.722 76.438 207.001 1.00 12.68 N
ATOM 15 C8 A B2871 -5.141 77.454 206.180 1.00 12.68 C
ATOM 16 N7 A B2871 -6.446 77.552 206.088 1.00 12.68 N
ATOM 17 C5 A B2871 -6.917 76.534 206.903 1.00 12.68 C
ATOM 18 C6 A B2871 -8.210 76.110 207.236 1.00 12.68 C
ATOM 19 N6 A B2871 -9.343 76.646 206.780 1.00 12.68 N
ATOM 20 N1 A B2871 -8.316 75.072 208.074 1.00 12.68 N
ATOM 21 C2 A B2871 -7.197 74.514 208.543 1.00 12.68 C
ATOM 22 N3 A B2871 -5.933 74.821 208.316 1.00 12.68 N
ATOM 23 C4 A B2871 -5.865 75.848 207.476 1.00 12.68 C
ATOM 24 P C B2872 0.707 75.188 208.267 1.00 11.79 P
ATOM 25 OP1 C B2872 0.491 73.954 207.489 1.00 11.79 O
ATOM 26 OP2 C B2872 1.453 75.101 209.551 1.00 11.79 O
ATOM 27 O5' C B2872 1.349 76.306 207.342 1.00 11.79 O
TER
ATOM 2 P U A2828 -14.961 77.344 202.266 1.00 11.49 P
ATOM 3 OP1 U A2828 -15.787 76.730 203.354 1.00 11.49 O
ATOM 4 OP2 U A2828 -15.449 77.248 200.858 1.00 11.49 O
ATOM 5 O5' U A2828 -14.629 78.870 202.616 1.00 11.49 O
ATOM 6 C5' U A2828 -15.485 79.923 202.162 1.00 11.49 C
ATOM 7 C4' U A2828 -14.766 81.256 202.058 1.00 11.49 C
ATOM 8 O4' U A2828 -14.213 81.617 203.343 1.00 11.49 O
ATOM 9 C3' U A2828 -13.578 81.315 201.111 1.00 11.49 C
ATOM 10 O3' U A2828 -13.951 81.522 199.761 1.00 11.49 O
ATOM 11 C2' U A2828 -12.771 82.456 201.685 1.00 11.49 C
ATOM 12 O2' U A2828 -13.340 83.698 201.340 1.00 11.49 O
ATOM 13 C1' U A2828 -12.967 82.235 203.170 1.00 11.49 C
ATOM 14 N1 U A2828 -11.943 81.349 203.698 1.00 11.52 N
ATOM 15 C2 U A2828 -10.669 81.897 203.798 1.00 11.52 C
ATOM 16 O2 U A2828 -10.392 83.072 203.500 1.00 11.52 O
ATOM 17 N3 U A2828 -9.742 81.005 204.268 1.00 11.52 N
ATOM 18 C4 U A2828 -9.971 79.697 204.609 1.00 11.52 C
ATOM 19 O4 U A2828 -9.020 79.063 205.031 1.00 11.52 O
ATOM 20 C5 U A2828 -11.306 79.209 204.453 1.00 11.52 C
ATOM 21 C6 U A2828 -12.235 80.044 204.002 1.00 11.52 C
ATOM 22 P A A2829 -13.303 80.634 198.579 1.00 2.16 P
ATOM 23 OP1 A A2829 -14.329 80.535 197.518 1.00 2.16 O
ATOM 24 OP2 A A2829 -12.788 79.375 199.200 1.00 2.16 O
ATOM 25 O5' A A2829 -12.090 81.528 198.084 1.00 2.16 O
TER
ATOM 1 O3' U B2870 -3.179 69.945 205.530 1.00 21.10 O
ATOM 2 P A B2871 -3.851 70.691 206.784 1.00 12.88 P
ATOM 3 OP1 A B2871 -3.356 70.008 208.011 1.00 12.88 O
ATOM 4 OP2 A B2871 -5.337 70.738 206.537 1.00 12.88 O
ATOM 5 O5' A B2871 -3.220 72.150 206.698 1.00 12.88 O
ATOM 6 C5' A B2871 -2.611 72.738 207.838 1.00 12.88 C
ATOM 7 C4' A B2871 -2.090 74.115 207.542 1.00 12.88 C
ATOM 8 O4' A B2871 -3.049 74.828 206.719 1.00 12.88 O
ATOM 9 C3' A B2871 -1.858 74.986 208.772 1.00 12.88 C
ATOM 10 O3' A B2871 -0.728 75.816 208.582 1.00 12.88 O
ATOM 11 C2' A B2871 -3.093 75.862 208.806 1.00 12.88 C
ATOM 12 O2' A B2871 -2.908 77.087 209.476 1.00 12.88 O
ATOM 13 C1' A B2871 -3.344 76.069 207.324 1.00 12.88 C
ATOM 14 N9 A B2871 -4.722 76.438 207.001 1.00 12.68 N
ATOM 15 C8 A B2871 -5.141 77.454 206.180 1.00 12.68 C
ATOM 16 N7 A B2871 -6.446 77.552 206.088 1.00 12.68 N
ATOM 17 C5 A B2871 -6.917 76.534 206.903 1.00 12.68 C
ATOM 18 C6 A B2871 -8.210 76.110 207.236 1.00 12.68 C
ATOM 19 N6 A B2871 -9.343 76.646 206.780 1.00 12.68 N
ATOM 20 N1 A B2871 -8.316 75.072 208.074 1.00 12.68 N
ATOM 21 C2 A B2871 -7.197 74.514 208.543 1.00 12.68 C
ATOM 22 N3 A B2871 -5.933 74.821 208.316 1.00 12.68 N
ATOM 23 C4 A B2871 -5.865 75.848 207.476 1.00 12.68 C
ATOM 24 P C B2872 0.707 75.188 208.267 1.00 11.79 P
ATOM 25 OP1 C B2872 0.491 73.954 207.489 1.00 11.79 O
ATOM 26 OP2 C B2872 1.453 75.101 209.551 1.00 11.79 O
ATOM 27 O5' C B2872 1.349 76.306 207.342 1.00 11.79 O
TER
Atoms:
C4: (-9.971,79.697,204.609)
N3: (-9.742,81.005,204.268)
OP1: (-15.787,76.730,203.354)
OP2: (-15.449,77.248,200.858)
C2: (-10.669,81.897,203.798)
C1': (-12.967,82.235,203.170)
C3': (-13.578,81.315,201.111)
O5': (-14.629,78.870,202.616)
O4': (-14.213,81.617,203.343)
C5': (-15.485,79.923,202.162)
P: (-14.961,77.344,202.266)
C4': (-14.766,81.256,202.058)
C2': (-12.771,82.456,201.685)
O2': (-13.340,83.698,201.340)
N1: (-11.943,81.349,203.698)
O4: (-9.020,79.063,205.031)
O2: (-10.392,83.072,203.500)
C6: (-12.235,80.044,204.002)
C5: (-11.306,79.209,204.453)
O3': (-13.951,81.522,199.761)
N3: (-9.742,81.005,204.268)
OP1: (-15.787,76.730,203.354)
OP2: (-15.449,77.248,200.858)
C2: (-10.669,81.897,203.798)
C1': (-12.967,82.235,203.170)
C3': (-13.578,81.315,201.111)
O5': (-14.629,78.870,202.616)
O4': (-14.213,81.617,203.343)
C5': (-15.485,79.923,202.162)
P: (-14.961,77.344,202.266)
C4': (-14.766,81.256,202.058)
C2': (-12.771,82.456,201.685)
O2': (-13.340,83.698,201.340)
N1: (-11.943,81.349,203.698)
O4: (-9.020,79.063,205.031)
O2: (-10.392,83.072,203.500)
C6: (-12.235,80.044,204.002)
C5: (-11.306,79.209,204.453)
O3': (-13.951,81.522,199.761)
OP1: (-3.356,70.008,208.011)
OP2: (-5.337,70.738,206.537)
C3': (-1.858,74.986,208.772)
C1': (-3.344,76.069,207.324)
C5': (-2.611,72.738,207.838)
O4': (-3.049,74.828,206.719)
C8: (-5.141,77.454,206.180)
O2': (-2.908,77.087,209.476)
C6: (-8.210,76.110,207.236)
C5: (-6.917,76.534,206.903)
C4: (-5.865,75.848,207.476)
P: (-3.851,70.691,206.784)
C4': (-2.090,74.115,207.542)
C2': (-3.093,75.862,208.806)
C2: (-7.197,74.514,208.543)
N1: (-8.316,75.072,208.074)
N3: (-5.933,74.821,208.316)
N6: (-9.343,76.646,206.780)
N7: (-6.446,77.552,206.088)
N9: (-4.722,76.438,207.001)
O5': (-3.220,72.150,206.698)
O3': (-0.728,75.816,208.582)
OP2: (-5.337,70.738,206.537)
C3': (-1.858,74.986,208.772)
C1': (-3.344,76.069,207.324)
C5': (-2.611,72.738,207.838)
O4': (-3.049,74.828,206.719)
C8: (-5.141,77.454,206.180)
O2': (-2.908,77.087,209.476)
C6: (-8.210,76.110,207.236)
C5: (-6.917,76.534,206.903)
C4: (-5.865,75.848,207.476)
P: (-3.851,70.691,206.784)
C4': (-2.090,74.115,207.542)
C2': (-3.093,75.862,208.806)
C2: (-7.197,74.514,208.543)
N1: (-8.316,75.072,208.074)
N3: (-5.933,74.821,208.316)
N6: (-9.343,76.646,206.780)
N7: (-6.446,77.552,206.088)
N9: (-4.722,76.438,207.001)
O5': (-3.220,72.150,206.698)
O3': (-0.728,75.816,208.582)
Image (generated by PyMOL):