Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1946:1994
Extra
PDB:
ATOM 1 O3' G A 945 13.680 -48.259 13.547 1.00 80.03 O
ATOM 2 P A A 946 14.952 -48.989 14.201 1.00 63.57 P
ATOM 3 OP1 A A 946 16.128 -48.656 13.338 1.00 63.63 O
ATOM 4 OP2 A A 946 14.611 -50.422 14.404 1.00 63.93 O
ATOM 5 O5' A A 946 15.044 -48.242 15.616 1.00 62.87 O
ATOM 6 C5' A A 946 16.262 -48.071 16.292 1.00 62.41 C
ATOM 7 C4' A A 946 16.469 -49.147 17.305 1.00 62.31 C
ATOM 8 O4' A A 946 17.885 -49.299 17.503 1.00 62.09 O
ATOM 9 C3' A A 946 15.876 -48.907 18.706 1.00 61.87 C
ATOM 10 O3' A A 946 14.580 -49.466 18.854 1.00 62.15 O
ATOM 11 C2' A A 946 16.884 -49.566 19.618 1.00 61.60 C
ATOM 12 O2' A A 946 16.638 -50.965 19.686 1.00 61.99 O
ATOM 13 C1' A A 946 18.186 -49.342 18.863 1.00 61.61 C
ATOM 14 N9 A A 946 18.825 -48.069 19.229 1.00 61.08 N
ATOM 15 C8 A A 946 18.739 -46.823 18.659 1.00 60.97 C
ATOM 16 N7 A A 946 19.453 -45.932 19.270 1.00 60.46 N
ATOM 17 C5 A A 946 20.056 -46.646 20.312 1.00 60.23 C
ATOM 18 C6 A A 946 20.964 -46.328 21.339 1.00 59.72 C
ATOM 19 N6 A A 946 21.473 -45.110 21.554 1.00 59.30 N
ATOM 20 N1 A A 946 21.344 -47.312 22.170 1.00 59.66 N
ATOM 21 C2 A A 946 20.879 -48.537 22.021 1.00 60.07 C
ATOM 22 N3 A A 946 20.034 -48.979 21.107 1.00 60.57 N
ATOM 23 C4 A A 946 19.676 -47.969 20.285 1.00 60.61 C
ATOM 24 P A A 947 13.696 -49.247 20.203 1.00 57.05 P
ATOM 25 OP1 A A 947 12.426 -49.944 19.999 1.00 57.49 O
ATOM 26 OP2 A A 947 13.665 -47.798 20.462 1.00 56.60 O
ATOM 27 O5' A A 947 14.529 -49.986 21.358 1.00 56.75 O
TER
ATOM 1 O3' C B 993 20.648 -44.890 31.357 1.00 44.83 O
ATOM 2 P U B 994 21.945 -45.783 30.982 1.00 42.99 P
ATOM 3 OP1 U B 994 21.793 -47.089 31.695 1.00 43.15 O
ATOM 4 OP2 U B 994 23.168 -44.942 31.266 1.00 42.60 O
ATOM 5 O5' U B 994 21.813 -45.995 29.399 1.00 43.45 O
ATOM 6 C5' U B 994 21.261 -47.185 28.859 1.00 43.94 C
ATOM 7 C4' U B 994 21.494 -47.280 27.389 1.00 44.33 C
ATOM 8 O4' U B 994 21.081 -46.062 26.740 1.00 44.26 O
ATOM 9 C3' U B 994 22.930 -47.443 26.977 1.00 44.33 C
ATOM 10 O3' U B 994 23.349 -48.782 27.104 1.00 44.59 O
ATOM 11 C2' U B 994 22.928 -46.915 25.543 1.00 44.59 C
ATOM 12 O2' U B 994 22.351 -47.859 24.671 1.00 45.14 O
ATOM 13 C1' U B 994 21.937 -45.778 25.653 1.00 44.39 C
ATOM 14 N1 U B 994 22.585 -44.454 25.875 1.00 43.95 N
ATOM 15 C2 U B 994 23.123 -43.769 24.791 1.00 44.04 C
ATOM 16 O2 U B 994 23.207 -44.156 23.635 1.00 44.45 O
ATOM 17 N3 U B 994 23.598 -42.558 25.131 1.00 43.62 N
ATOM 18 C4 U B 994 23.607 -41.963 26.357 1.00 43.15 C
ATOM 19 O4 U B 994 24.097 -40.840 26.473 1.00 42.83 O
ATOM 20 C5 U B 994 23.033 -42.736 27.381 1.00 43.10 C
ATOM 21 C6 U B 994 22.550 -43.917 27.126 1.00 43.49 C
ATOM 22 P U B 995 24.822 -49.205 26.750 1.00 48.97 P
ATOM 23 OP1 U B 995 25.180 -50.289 27.678 1.00 48.97 O
ATOM 24 OP2 U B 995 25.628 -47.973 26.725 1.00 48.58 O
ATOM 25 O5' U B 995 24.688 -49.770 25.273 1.00 49.54 O
TER
ATOM 2 P A A 946 14.952 -48.989 14.201 1.00 63.57 P
ATOM 3 OP1 A A 946 16.128 -48.656 13.338 1.00 63.63 O
ATOM 4 OP2 A A 946 14.611 -50.422 14.404 1.00 63.93 O
ATOM 5 O5' A A 946 15.044 -48.242 15.616 1.00 62.87 O
ATOM 6 C5' A A 946 16.262 -48.071 16.292 1.00 62.41 C
ATOM 7 C4' A A 946 16.469 -49.147 17.305 1.00 62.31 C
ATOM 8 O4' A A 946 17.885 -49.299 17.503 1.00 62.09 O
ATOM 9 C3' A A 946 15.876 -48.907 18.706 1.00 61.87 C
ATOM 10 O3' A A 946 14.580 -49.466 18.854 1.00 62.15 O
ATOM 11 C2' A A 946 16.884 -49.566 19.618 1.00 61.60 C
ATOM 12 O2' A A 946 16.638 -50.965 19.686 1.00 61.99 O
ATOM 13 C1' A A 946 18.186 -49.342 18.863 1.00 61.61 C
ATOM 14 N9 A A 946 18.825 -48.069 19.229 1.00 61.08 N
ATOM 15 C8 A A 946 18.739 -46.823 18.659 1.00 60.97 C
ATOM 16 N7 A A 946 19.453 -45.932 19.270 1.00 60.46 N
ATOM 17 C5 A A 946 20.056 -46.646 20.312 1.00 60.23 C
ATOM 18 C6 A A 946 20.964 -46.328 21.339 1.00 59.72 C
ATOM 19 N6 A A 946 21.473 -45.110 21.554 1.00 59.30 N
ATOM 20 N1 A A 946 21.344 -47.312 22.170 1.00 59.66 N
ATOM 21 C2 A A 946 20.879 -48.537 22.021 1.00 60.07 C
ATOM 22 N3 A A 946 20.034 -48.979 21.107 1.00 60.57 N
ATOM 23 C4 A A 946 19.676 -47.969 20.285 1.00 60.61 C
ATOM 24 P A A 947 13.696 -49.247 20.203 1.00 57.05 P
ATOM 25 OP1 A A 947 12.426 -49.944 19.999 1.00 57.49 O
ATOM 26 OP2 A A 947 13.665 -47.798 20.462 1.00 56.60 O
ATOM 27 O5' A A 947 14.529 -49.986 21.358 1.00 56.75 O
TER
ATOM 1 O3' C B 993 20.648 -44.890 31.357 1.00 44.83 O
ATOM 2 P U B 994 21.945 -45.783 30.982 1.00 42.99 P
ATOM 3 OP1 U B 994 21.793 -47.089 31.695 1.00 43.15 O
ATOM 4 OP2 U B 994 23.168 -44.942 31.266 1.00 42.60 O
ATOM 5 O5' U B 994 21.813 -45.995 29.399 1.00 43.45 O
ATOM 6 C5' U B 994 21.261 -47.185 28.859 1.00 43.94 C
ATOM 7 C4' U B 994 21.494 -47.280 27.389 1.00 44.33 C
ATOM 8 O4' U B 994 21.081 -46.062 26.740 1.00 44.26 O
ATOM 9 C3' U B 994 22.930 -47.443 26.977 1.00 44.33 C
ATOM 10 O3' U B 994 23.349 -48.782 27.104 1.00 44.59 O
ATOM 11 C2' U B 994 22.928 -46.915 25.543 1.00 44.59 C
ATOM 12 O2' U B 994 22.351 -47.859 24.671 1.00 45.14 O
ATOM 13 C1' U B 994 21.937 -45.778 25.653 1.00 44.39 C
ATOM 14 N1 U B 994 22.585 -44.454 25.875 1.00 43.95 N
ATOM 15 C2 U B 994 23.123 -43.769 24.791 1.00 44.04 C
ATOM 16 O2 U B 994 23.207 -44.156 23.635 1.00 44.45 O
ATOM 17 N3 U B 994 23.598 -42.558 25.131 1.00 43.62 N
ATOM 18 C4 U B 994 23.607 -41.963 26.357 1.00 43.15 C
ATOM 19 O4 U B 994 24.097 -40.840 26.473 1.00 42.83 O
ATOM 20 C5 U B 994 23.033 -42.736 27.381 1.00 43.10 C
ATOM 21 C6 U B 994 22.550 -43.917 27.126 1.00 43.49 C
ATOM 22 P U B 995 24.822 -49.205 26.750 1.00 48.97 P
ATOM 23 OP1 U B 995 25.180 -50.289 27.678 1.00 48.97 O
ATOM 24 OP2 U B 995 25.628 -47.973 26.725 1.00 48.58 O
ATOM 25 O5' U B 995 24.688 -49.770 25.273 1.00 49.54 O
TER
Atoms:
OP1: (16.128,-48.656,13.338)
OP2: (14.611,-50.422,14.404)
C3': (15.876,-48.907,18.706)
C1': (18.186,-49.342,18.863)
C5': (16.262,-48.071,16.292)
O4': (17.885,-49.299,17.503)
C8: (18.739,-46.823,18.659)
O2': (16.638,-50.965,19.686)
C6: (20.964,-46.328,21.339)
C5: (20.056,-46.646,20.312)
C4: (19.676,-47.969,20.285)
P: (14.952,-48.989,14.201)
C4': (16.469,-49.147,17.305)
C2': (16.884,-49.566,19.618)
C2: (20.879,-48.537,22.021)
N1: (21.344,-47.312,22.170)
N3: (20.034,-48.979,21.107)
N6: (21.473,-45.110,21.554)
N7: (19.453,-45.932,19.270)
N9: (18.825,-48.069,19.229)
O5': (15.044,-48.242,15.616)
O3': (14.580,-49.466,18.854)
OP2: (14.611,-50.422,14.404)
C3': (15.876,-48.907,18.706)
C1': (18.186,-49.342,18.863)
C5': (16.262,-48.071,16.292)
O4': (17.885,-49.299,17.503)
C8: (18.739,-46.823,18.659)
O2': (16.638,-50.965,19.686)
C6: (20.964,-46.328,21.339)
C5: (20.056,-46.646,20.312)
C4: (19.676,-47.969,20.285)
P: (14.952,-48.989,14.201)
C4': (16.469,-49.147,17.305)
C2': (16.884,-49.566,19.618)
C2: (20.879,-48.537,22.021)
N1: (21.344,-47.312,22.170)
N3: (20.034,-48.979,21.107)
N6: (21.473,-45.110,21.554)
N7: (19.453,-45.932,19.270)
N9: (18.825,-48.069,19.229)
O5': (15.044,-48.242,15.616)
O3': (14.580,-49.466,18.854)
C4: (23.607,-41.963,26.357)
N3: (23.598,-42.558,25.131)
OP1: (21.793,-47.089,31.695)
OP2: (23.168,-44.942,31.266)
C2: (23.123,-43.769,24.791)
C1': (21.937,-45.778,25.653)
C3': (22.930,-47.443,26.977)
O5': (21.813,-45.995,29.399)
O4': (21.081,-46.062,26.740)
C5': (21.261,-47.185,28.859)
P: (21.945,-45.783,30.982)
C4': (21.494,-47.280,27.389)
C2': (22.928,-46.915,25.543)
O2': (22.351,-47.859,24.671)
N1: (22.585,-44.454,25.875)
O4: (24.097,-40.840,26.473)
O2: (23.207,-44.156,23.635)
C6: (22.550,-43.917,27.126)
C5: (23.033,-42.736,27.381)
O3': (23.349,-48.782,27.104)
N3: (23.598,-42.558,25.131)
OP1: (21.793,-47.089,31.695)
OP2: (23.168,-44.942,31.266)
C2: (23.123,-43.769,24.791)
C1': (21.937,-45.778,25.653)
C3': (22.930,-47.443,26.977)
O5': (21.813,-45.995,29.399)
O4': (21.081,-46.062,26.740)
C5': (21.261,-47.185,28.859)
P: (21.945,-45.783,30.982)
C4': (21.494,-47.280,27.389)
C2': (22.928,-46.915,25.543)
O2': (22.351,-47.859,24.671)
N1: (22.585,-44.454,25.875)
O4: (24.097,-40.840,26.473)
O2: (23.207,-44.156,23.635)
C6: (22.550,-43.917,27.126)
C5: (23.033,-42.736,27.381)
O3': (23.349,-48.782,27.104)
Image (generated by PyMOL):