Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5H:52213:5889
Extra
PDB:
ATOM 1 O3' A A2212 138.691 5.728 221.790 1.00121.58 O
ATOM 2 P A A2213 137.148 5.338 221.459 1.00 83.27 P
ATOM 3 OP1 A A2213 137.023 5.201 219.980 1.00 83.55 O
ATOM 4 OP2 A A2213 136.261 6.313 222.167 1.00 83.18 O
ATOM 5 O5' A A2213 137.051 3.899 222.154 1.00 83.21 O
ATOM 6 C5' A A2213 138.249 3.210 222.546 1.00 83.09 C
ATOM 7 C4' A A2213 138.157 2.599 223.929 1.00 82.90 C
ATOM 8 O4' A A2213 136.805 2.087 224.148 1.00 82.96 O
ATOM 9 C3' A A2213 139.107 1.409 224.178 1.00 82.86 C
ATOM 10 O3' A A2213 139.518 1.408 225.564 1.00 82.62 O
ATOM 11 C2' A A2213 138.186 0.211 223.880 1.00 83.02 C
ATOM 12 O2' A A2213 138.580 -1.025 224.436 1.00 82.98 O
ATOM 13 C1' A A2213 136.873 0.705 224.467 1.00 82.98 C
ATOM 14 N9 A A2213 135.677 0.033 223.943 1.00 83.18 N
ATOM 15 C8 A A2213 134.891 0.359 222.861 1.00 83.39 C
ATOM 16 N7 A A2213 133.883 -0.467 222.686 1.00 83.54 N
ATOM 17 C5 A A2213 133.996 -1.388 223.724 1.00 83.42 C
ATOM 18 C6 A A2213 133.217 -2.506 224.097 1.00 83.49 C
ATOM 19 N6 A A2213 132.123 -2.922 223.456 1.00 83.71 N
ATOM 20 N1 A A2213 133.639 -3.190 225.181 1.00 83.33 N
ATOM 21 C2 A A2213 134.748 -2.797 225.854 1.00 83.12 C
ATOM 22 N3 A A2213 135.556 -1.774 225.615 1.00 83.03 N
ATOM 23 C4 A A2213 135.106 -1.092 224.521 1.00 83.19 C
ATOM 24 P G A2214 140.718 0.468 226.089 1.00101.83 P
ATOM 25 OP1 G A2214 141.718 0.378 224.981 1.00101.96 O
ATOM 26 OP2 G A2214 140.109 -0.804 226.630 1.00101.85 O
ATOM 27 O5' G A2214 141.307 1.309 227.308 1.00101.58 O
TER
ATOM 1 O3' C B 888 134.957 -10.759 229.662 1.00 37.06 O
ATOM 2 P U B 889 133.513 -10.521 230.217 1.00 36.04 P
ATOM 3 OP1 U B 889 133.618 -10.279 231.682 1.00 35.82 O
ATOM 4 OP2 U B 889 132.699 -11.666 229.724 1.00 36.29 O
ATOM 5 O5' U B 889 133.048 -9.196 229.451 1.00 36.04 O
ATOM 6 C5' U B 889 133.837 -8.033 229.429 1.00 35.87 C
ATOM 7 C4' U B 889 133.391 -7.037 228.347 1.00 35.96 C
ATOM 8 O4' U B 889 133.832 -7.442 227.028 1.00 36.15 O
ATOM 9 C3' U B 889 131.911 -6.744 228.139 1.00 36.08 C
ATOM 10 O3' U B 889 131.386 -5.914 229.143 1.00 35.92 O
ATOM 11 C2' U B 889 132.017 -5.980 226.873 1.00 36.19 C
ATOM 12 O2' U B 889 132.606 -4.751 227.186 1.00 35.99 O
ATOM 13 C1' U B 889 133.049 -6.781 226.087 1.00 36.29 C
ATOM 14 N1 U B 889 132.410 -7.757 225.219 1.00 36.57 N
ATOM 15 C2 U B 889 131.856 -7.233 224.104 1.00 36.74 C
ATOM 16 O2 U B 889 131.978 -6.062 223.837 1.00 36.67 O
ATOM 17 N3 U B 889 131.192 -8.110 223.302 1.00 37.01 N
ATOM 18 C4 U B 889 131.042 -9.465 223.514 1.00 37.13 C
ATOM 19 O4 U B 889 130.402 -10.171 222.713 1.00 37.40 O
ATOM 20 C5 U B 889 131.647 -9.925 224.713 1.00 36.93 C
ATOM 21 C6 U B 889 132.280 -9.072 225.520 1.00 36.66 C
ATOM 22 P G B 890 129.855 -5.979 229.574 1.00 32.83 P
ATOM 23 OP1 G B 890 129.658 -5.044 230.709 1.00 32.63 O
ATOM 24 OP2 G B 890 129.537 -7.410 229.787 1.00 32.96 O
ATOM 25 O5' G B 890 129.101 -5.406 228.309 1.00 33.03 O
TER
ATOM 2 P A A2213 137.148 5.338 221.459 1.00 83.27 P
ATOM 3 OP1 A A2213 137.023 5.201 219.980 1.00 83.55 O
ATOM 4 OP2 A A2213 136.261 6.313 222.167 1.00 83.18 O
ATOM 5 O5' A A2213 137.051 3.899 222.154 1.00 83.21 O
ATOM 6 C5' A A2213 138.249 3.210 222.546 1.00 83.09 C
ATOM 7 C4' A A2213 138.157 2.599 223.929 1.00 82.90 C
ATOM 8 O4' A A2213 136.805 2.087 224.148 1.00 82.96 O
ATOM 9 C3' A A2213 139.107 1.409 224.178 1.00 82.86 C
ATOM 10 O3' A A2213 139.518 1.408 225.564 1.00 82.62 O
ATOM 11 C2' A A2213 138.186 0.211 223.880 1.00 83.02 C
ATOM 12 O2' A A2213 138.580 -1.025 224.436 1.00 82.98 O
ATOM 13 C1' A A2213 136.873 0.705 224.467 1.00 82.98 C
ATOM 14 N9 A A2213 135.677 0.033 223.943 1.00 83.18 N
ATOM 15 C8 A A2213 134.891 0.359 222.861 1.00 83.39 C
ATOM 16 N7 A A2213 133.883 -0.467 222.686 1.00 83.54 N
ATOM 17 C5 A A2213 133.996 -1.388 223.724 1.00 83.42 C
ATOM 18 C6 A A2213 133.217 -2.506 224.097 1.00 83.49 C
ATOM 19 N6 A A2213 132.123 -2.922 223.456 1.00 83.71 N
ATOM 20 N1 A A2213 133.639 -3.190 225.181 1.00 83.33 N
ATOM 21 C2 A A2213 134.748 -2.797 225.854 1.00 83.12 C
ATOM 22 N3 A A2213 135.556 -1.774 225.615 1.00 83.03 N
ATOM 23 C4 A A2213 135.106 -1.092 224.521 1.00 83.19 C
ATOM 24 P G A2214 140.718 0.468 226.089 1.00101.83 P
ATOM 25 OP1 G A2214 141.718 0.378 224.981 1.00101.96 O
ATOM 26 OP2 G A2214 140.109 -0.804 226.630 1.00101.85 O
ATOM 27 O5' G A2214 141.307 1.309 227.308 1.00101.58 O
TER
ATOM 1 O3' C B 888 134.957 -10.759 229.662 1.00 37.06 O
ATOM 2 P U B 889 133.513 -10.521 230.217 1.00 36.04 P
ATOM 3 OP1 U B 889 133.618 -10.279 231.682 1.00 35.82 O
ATOM 4 OP2 U B 889 132.699 -11.666 229.724 1.00 36.29 O
ATOM 5 O5' U B 889 133.048 -9.196 229.451 1.00 36.04 O
ATOM 6 C5' U B 889 133.837 -8.033 229.429 1.00 35.87 C
ATOM 7 C4' U B 889 133.391 -7.037 228.347 1.00 35.96 C
ATOM 8 O4' U B 889 133.832 -7.442 227.028 1.00 36.15 O
ATOM 9 C3' U B 889 131.911 -6.744 228.139 1.00 36.08 C
ATOM 10 O3' U B 889 131.386 -5.914 229.143 1.00 35.92 O
ATOM 11 C2' U B 889 132.017 -5.980 226.873 1.00 36.19 C
ATOM 12 O2' U B 889 132.606 -4.751 227.186 1.00 35.99 O
ATOM 13 C1' U B 889 133.049 -6.781 226.087 1.00 36.29 C
ATOM 14 N1 U B 889 132.410 -7.757 225.219 1.00 36.57 N
ATOM 15 C2 U B 889 131.856 -7.233 224.104 1.00 36.74 C
ATOM 16 O2 U B 889 131.978 -6.062 223.837 1.00 36.67 O
ATOM 17 N3 U B 889 131.192 -8.110 223.302 1.00 37.01 N
ATOM 18 C4 U B 889 131.042 -9.465 223.514 1.00 37.13 C
ATOM 19 O4 U B 889 130.402 -10.171 222.713 1.00 37.40 O
ATOM 20 C5 U B 889 131.647 -9.925 224.713 1.00 36.93 C
ATOM 21 C6 U B 889 132.280 -9.072 225.520 1.00 36.66 C
ATOM 22 P G B 890 129.855 -5.979 229.574 1.00 32.83 P
ATOM 23 OP1 G B 890 129.658 -5.044 230.709 1.00 32.63 O
ATOM 24 OP2 G B 890 129.537 -7.410 229.787 1.00 32.96 O
ATOM 25 O5' G B 890 129.101 -5.406 228.309 1.00 33.03 O
TER
Atoms:
OP1: (137.023,5.201,219.980)
OP2: (136.261,6.313,222.167)
C3': (139.107,1.409,224.178)
C1': (136.873,0.705,224.467)
C5': (138.249,3.210,222.546)
O4': (136.805,2.087,224.148)
C8: (134.891,0.359,222.861)
O2': (138.580,-1.025,224.436)
C6: (133.217,-2.506,224.097)
C5: (133.996,-1.388,223.724)
C4: (135.106,-1.092,224.521)
P: (137.148,5.338,221.459)
C4': (138.157,2.599,223.929)
C2': (138.186,0.211,223.880)
C2: (134.748,-2.797,225.854)
N1: (133.639,-3.190,225.181)
N3: (135.556,-1.774,225.615)
N6: (132.123,-2.922,223.456)
N7: (133.883,-0.467,222.686)
N9: (135.677,0.033,223.943)
O5': (137.051,3.899,222.154)
O3': (139.518,1.408,225.564)
OP2: (136.261,6.313,222.167)
C3': (139.107,1.409,224.178)
C1': (136.873,0.705,224.467)
C5': (138.249,3.210,222.546)
O4': (136.805,2.087,224.148)
C8: (134.891,0.359,222.861)
O2': (138.580,-1.025,224.436)
C6: (133.217,-2.506,224.097)
C5: (133.996,-1.388,223.724)
C4: (135.106,-1.092,224.521)
P: (137.148,5.338,221.459)
C4': (138.157,2.599,223.929)
C2': (138.186,0.211,223.880)
C2: (134.748,-2.797,225.854)
N1: (133.639,-3.190,225.181)
N3: (135.556,-1.774,225.615)
N6: (132.123,-2.922,223.456)
N7: (133.883,-0.467,222.686)
N9: (135.677,0.033,223.943)
O5': (137.051,3.899,222.154)
O3': (139.518,1.408,225.564)
C4: (131.042,-9.465,223.514)
N3: (131.192,-8.110,223.302)
OP1: (133.618,-10.279,231.682)
OP2: (132.699,-11.666,229.724)
C2: (131.856,-7.233,224.104)
C1': (133.049,-6.781,226.087)
C3': (131.911,-6.744,228.139)
O5': (133.048,-9.196,229.451)
O4': (133.832,-7.442,227.028)
C5': (133.837,-8.033,229.429)
P: (133.513,-10.521,230.217)
C4': (133.391,-7.037,228.347)
C2': (132.017,-5.980,226.873)
O2': (132.606,-4.751,227.186)
N1: (132.410,-7.757,225.219)
O4: (130.402,-10.171,222.713)
O2: (131.978,-6.062,223.837)
C6: (132.280,-9.072,225.520)
C5: (131.647,-9.925,224.713)
O3': (131.386,-5.914,229.143)
N3: (131.192,-8.110,223.302)
OP1: (133.618,-10.279,231.682)
OP2: (132.699,-11.666,229.724)
C2: (131.856,-7.233,224.104)
C1': (133.049,-6.781,226.087)
C3': (131.911,-6.744,228.139)
O5': (133.048,-9.196,229.451)
O4': (133.832,-7.442,227.028)
C5': (133.837,-8.033,229.429)
P: (133.513,-10.521,230.217)
C4': (133.391,-7.037,228.347)
C2': (132.017,-5.980,226.873)
O2': (132.606,-4.751,227.186)
N1: (132.410,-7.757,225.219)
O4: (130.402,-10.171,222.713)
O2: (131.978,-6.062,223.837)
C6: (132.280,-9.072,225.520)
C5: (131.647,-9.925,224.713)
O3': (131.386,-5.914,229.143)
Image (generated by PyMOL):