Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ5:0223:0224
Extra
PDB:
ATOM 1 O3' A A 222 53.270 110.679 16.800 1.00 55.50 O
ATOM 2 P C A 223 53.469 110.623 15.207 1.00 58.23 P
ATOM 3 OP1 C A 223 53.401 112.029 14.720 1.00 58.91 O
ATOM 4 OP2 C A 223 52.563 109.599 14.626 1.00 57.15 O
ATOM 5 O5' C A 223 54.969 110.119 15.062 1.00 55.46 O
ATOM 6 C5' C A 223 55.393 109.396 13.917 1.00 54.77 C
ATOM 7 C4' C A 223 56.738 108.780 14.178 1.00 54.83 C
ATOM 8 O4' C A 223 56.644 107.838 15.280 1.00 54.41 O
ATOM 9 C3' C A 223 57.274 107.963 13.025 1.00 53.47 C
ATOM 10 O3' C A 223 57.868 108.832 12.063 1.00 54.04 O
ATOM 11 C2' C A 223 58.237 107.012 13.728 1.00 52.56 C
ATOM 12 O2' C A 223 59.463 107.602 14.096 1.00 52.58 O
ATOM 13 C1' C A 223 57.470 106.715 15.017 1.00 52.78 C
ATOM 14 N1 C A 223 56.617 105.516 14.929 1.00 53.04 N
ATOM 15 C2 C A 223 57.220 104.243 14.946 1.00 53.12 C
ATOM 16 O2 C A 223 58.452 104.155 15.043 1.00 53.44 O
ATOM 17 N3 C A 223 56.440 103.143 14.857 1.00 53.95 N
ATOM 18 C4 C A 223 55.112 103.272 14.763 1.00 54.93 C
ATOM 19 N4 C A 223 54.385 102.159 14.678 1.00 57.16 N
ATOM 20 C5 C A 223 54.473 104.550 14.753 1.00 53.70 C
ATOM 21 C6 C A 223 55.255 105.632 14.833 1.00 53.86 C
ATOM 22 P A A 224 58.041 108.347 10.541 1.00 53.69 P
ATOM 23 OP1 A A 224 58.690 109.446 9.785 1.00 56.74 O
ATOM 24 OP2 A A 224 56.733 107.816 10.084 1.00 53.14 O
ATOM 25 O5' A A 224 59.082 107.153 10.659 1.00 51.23 O
TER
ATOM 1 O3' C B 223 57.868 108.832 12.063 1.00 54.04 O
ATOM 2 P A B 224 58.041 108.347 10.541 1.00 53.69 P
ATOM 3 OP1 A B 224 58.690 109.446 9.785 1.00 56.74 O
ATOM 4 OP2 A B 224 56.733 107.816 10.084 1.00 53.14 O
ATOM 5 O5' A B 224 59.082 107.153 10.659 1.00 51.23 O
ATOM 6 C5' A B 224 59.766 106.635 9.516 1.00 50.96 C
ATOM 7 C4' A B 224 61.245 106.594 9.789 1.00 51.59 C
ATOM 8 O4' A B 224 61.772 107.945 9.713 1.00 51.14 O
ATOM 9 C3' A B 224 61.628 106.064 11.170 1.00 52.72 C
ATOM 10 O3' A B 224 62.902 105.432 11.118 1.00 54.43 O
ATOM 11 C2' A B 224 61.770 107.353 11.975 1.00 52.59 C
ATOM 12 O2' A B 224 62.617 107.215 13.093 1.00 52.63 O
ATOM 13 C1' A B 224 62.401 108.272 10.934 1.00 51.92 C
ATOM 14 N9 A B 224 62.252 109.710 11.161 1.00 50.31 N
ATOM 15 C8 A B 224 61.128 110.495 11.028 1.00 49.94 C
ATOM 16 N7 A B 224 61.343 111.769 11.248 1.00 47.15 N
ATOM 17 C5 A B 224 62.697 111.827 11.557 1.00 47.49 C
ATOM 18 C6 A B 224 63.548 112.898 11.882 1.00 46.48 C
ATOM 19 N6 A B 224 63.142 114.167 11.945 1.00 45.19 N
ATOM 20 N1 A B 224 64.846 112.616 12.143 1.00 45.81 N
ATOM 21 C2 A B 224 65.249 111.341 12.082 1.00 47.52 C
ATOM 22 N3 A B 224 64.545 110.248 11.786 1.00 48.91 N
ATOM 23 C4 A B 224 63.263 110.564 11.527 1.00 48.34 C
ATOM 24 P G B 225 63.054 103.964 10.479 1.00 54.44 P
ATOM 25 OP1 G B 225 61.814 103.687 9.715 1.00 54.70 O
ATOM 26 OP2 G B 225 63.513 102.996 11.499 1.00 55.72 O
ATOM 27 O5' G B 225 64.255 104.173 9.458 1.00 57.06 O
TER
ATOM 2 P C A 223 53.469 110.623 15.207 1.00 58.23 P
ATOM 3 OP1 C A 223 53.401 112.029 14.720 1.00 58.91 O
ATOM 4 OP2 C A 223 52.563 109.599 14.626 1.00 57.15 O
ATOM 5 O5' C A 223 54.969 110.119 15.062 1.00 55.46 O
ATOM 6 C5' C A 223 55.393 109.396 13.917 1.00 54.77 C
ATOM 7 C4' C A 223 56.738 108.780 14.178 1.00 54.83 C
ATOM 8 O4' C A 223 56.644 107.838 15.280 1.00 54.41 O
ATOM 9 C3' C A 223 57.274 107.963 13.025 1.00 53.47 C
ATOM 10 O3' C A 223 57.868 108.832 12.063 1.00 54.04 O
ATOM 11 C2' C A 223 58.237 107.012 13.728 1.00 52.56 C
ATOM 12 O2' C A 223 59.463 107.602 14.096 1.00 52.58 O
ATOM 13 C1' C A 223 57.470 106.715 15.017 1.00 52.78 C
ATOM 14 N1 C A 223 56.617 105.516 14.929 1.00 53.04 N
ATOM 15 C2 C A 223 57.220 104.243 14.946 1.00 53.12 C
ATOM 16 O2 C A 223 58.452 104.155 15.043 1.00 53.44 O
ATOM 17 N3 C A 223 56.440 103.143 14.857 1.00 53.95 N
ATOM 18 C4 C A 223 55.112 103.272 14.763 1.00 54.93 C
ATOM 19 N4 C A 223 54.385 102.159 14.678 1.00 57.16 N
ATOM 20 C5 C A 223 54.473 104.550 14.753 1.00 53.70 C
ATOM 21 C6 C A 223 55.255 105.632 14.833 1.00 53.86 C
ATOM 22 P A A 224 58.041 108.347 10.541 1.00 53.69 P
ATOM 23 OP1 A A 224 58.690 109.446 9.785 1.00 56.74 O
ATOM 24 OP2 A A 224 56.733 107.816 10.084 1.00 53.14 O
ATOM 25 O5' A A 224 59.082 107.153 10.659 1.00 51.23 O
TER
ATOM 1 O3' C B 223 57.868 108.832 12.063 1.00 54.04 O
ATOM 2 P A B 224 58.041 108.347 10.541 1.00 53.69 P
ATOM 3 OP1 A B 224 58.690 109.446 9.785 1.00 56.74 O
ATOM 4 OP2 A B 224 56.733 107.816 10.084 1.00 53.14 O
ATOM 5 O5' A B 224 59.082 107.153 10.659 1.00 51.23 O
ATOM 6 C5' A B 224 59.766 106.635 9.516 1.00 50.96 C
ATOM 7 C4' A B 224 61.245 106.594 9.789 1.00 51.59 C
ATOM 8 O4' A B 224 61.772 107.945 9.713 1.00 51.14 O
ATOM 9 C3' A B 224 61.628 106.064 11.170 1.00 52.72 C
ATOM 10 O3' A B 224 62.902 105.432 11.118 1.00 54.43 O
ATOM 11 C2' A B 224 61.770 107.353 11.975 1.00 52.59 C
ATOM 12 O2' A B 224 62.617 107.215 13.093 1.00 52.63 O
ATOM 13 C1' A B 224 62.401 108.272 10.934 1.00 51.92 C
ATOM 14 N9 A B 224 62.252 109.710 11.161 1.00 50.31 N
ATOM 15 C8 A B 224 61.128 110.495 11.028 1.00 49.94 C
ATOM 16 N7 A B 224 61.343 111.769 11.248 1.00 47.15 N
ATOM 17 C5 A B 224 62.697 111.827 11.557 1.00 47.49 C
ATOM 18 C6 A B 224 63.548 112.898 11.882 1.00 46.48 C
ATOM 19 N6 A B 224 63.142 114.167 11.945 1.00 45.19 N
ATOM 20 N1 A B 224 64.846 112.616 12.143 1.00 45.81 N
ATOM 21 C2 A B 224 65.249 111.341 12.082 1.00 47.52 C
ATOM 22 N3 A B 224 64.545 110.248 11.786 1.00 48.91 N
ATOM 23 C4 A B 224 63.263 110.564 11.527 1.00 48.34 C
ATOM 24 P G B 225 63.054 103.964 10.479 1.00 54.44 P
ATOM 25 OP1 G B 225 61.814 103.687 9.715 1.00 54.70 O
ATOM 26 OP2 G B 225 63.513 102.996 11.499 1.00 55.72 O
ATOM 27 O5' G B 225 64.255 104.173 9.458 1.00 57.06 O
TER
Atoms:
C2: (57.220,104.243,14.946)
OP1: (53.401,112.029,14.720)
OP2: (52.563,109.599,14.626)
C4: (55.112,103.272,14.763)
O5': (54.969,110.119,15.062)
C3': (57.274,107.963,13.025)
C1': (57.470,106.715,15.017)
O4': (56.644,107.838,15.280)
C5': (55.393,109.396,13.917)
P: (53.469,110.623,15.207)
O2: (58.452,104.155,15.043)
C4': (56.738,108.780,14.178)
C2': (58.237,107.012,13.728)
O2': (59.463,107.602,14.096)
N1: (56.617,105.516,14.929)
N3: (56.440,103.143,14.857)
N4: (54.385,102.159,14.678)
C6: (55.255,105.632,14.833)
C5: (54.473,104.550,14.753)
O3': (57.868,108.832,12.063)
OP1: (53.401,112.029,14.720)
OP2: (52.563,109.599,14.626)
C4: (55.112,103.272,14.763)
O5': (54.969,110.119,15.062)
C3': (57.274,107.963,13.025)
C1': (57.470,106.715,15.017)
O4': (56.644,107.838,15.280)
C5': (55.393,109.396,13.917)
P: (53.469,110.623,15.207)
O2: (58.452,104.155,15.043)
C4': (56.738,108.780,14.178)
C2': (58.237,107.012,13.728)
O2': (59.463,107.602,14.096)
N1: (56.617,105.516,14.929)
N3: (56.440,103.143,14.857)
N4: (54.385,102.159,14.678)
C6: (55.255,105.632,14.833)
C5: (54.473,104.550,14.753)
O3': (57.868,108.832,12.063)
OP1: (58.690,109.446,9.785)
OP2: (56.733,107.816,10.084)
C3': (61.628,106.064,11.170)
C1': (62.401,108.272,10.934)
C5': (59.766,106.635,9.516)
O4': (61.772,107.945,9.713)
C8: (61.128,110.495,11.028)
O2': (62.617,107.215,13.093)
C6: (63.548,112.898,11.882)
C5: (62.697,111.827,11.557)
C4: (63.263,110.564,11.527)
P: (58.041,108.347,10.541)
C4': (61.245,106.594,9.789)
C2': (61.770,107.353,11.975)
C2: (65.249,111.341,12.082)
N1: (64.846,112.616,12.143)
N3: (64.545,110.248,11.786)
N6: (63.142,114.167,11.945)
N7: (61.343,111.769,11.248)
N9: (62.252,109.710,11.161)
O5': (59.082,107.153,10.659)
O3': (62.902,105.432,11.118)
OP2: (56.733,107.816,10.084)
C3': (61.628,106.064,11.170)
C1': (62.401,108.272,10.934)
C5': (59.766,106.635,9.516)
O4': (61.772,107.945,9.713)
C8: (61.128,110.495,11.028)
O2': (62.617,107.215,13.093)
C6: (63.548,112.898,11.882)
C5: (62.697,111.827,11.557)
C4: (63.263,110.564,11.527)
P: (58.041,108.347,10.541)
C4': (61.245,106.594,9.789)
C2': (61.770,107.353,11.975)
C2: (65.249,111.341,12.082)
N1: (64.846,112.616,12.143)
N3: (64.545,110.248,11.786)
N6: (63.142,114.167,11.945)
N7: (61.343,111.769,11.248)
N9: (62.252,109.710,11.161)
O5': (59.082,107.153,10.659)
O3': (62.902,105.432,11.118)
Image (generated by PyMOL):