Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ6:0223:0224
Extra
PDB:
ATOM 1 O3' A A 222 53.415 110.538 16.758 1.00 56.47 O
ATOM 2 P C A 223 53.663 110.468 15.169 1.00 59.53 P
ATOM 3 OP1 C A 223 53.636 111.874 14.679 1.00 60.83 O
ATOM 4 OP2 C A 223 52.745 109.460 14.569 1.00 60.10 O
ATOM 5 O5' C A 223 55.151 109.919 15.063 1.00 56.79 O
ATOM 6 C5' C A 223 55.612 109.247 13.896 1.00 56.06 C
ATOM 7 C4' C A 223 56.946 108.613 14.175 1.00 56.07 C
ATOM 8 O4' C A 223 56.812 107.663 15.262 1.00 56.31 O
ATOM 9 C3' C A 223 57.508 107.798 13.031 1.00 55.51 C
ATOM 10 O3' C A 223 58.154 108.661 12.101 1.00 56.66 O
ATOM 11 C2' C A 223 58.440 106.828 13.751 1.00 53.96 C
ATOM 12 O2' C A 223 59.667 107.398 14.152 1.00 51.84 O
ATOM 13 C1' C A 223 57.634 106.532 15.015 1.00 54.31 C
ATOM 14 N1 C A 223 56.769 105.343 14.912 1.00 53.79 N
ATOM 15 C2 C A 223 57.355 104.061 14.931 1.00 54.31 C
ATOM 16 O2 C A 223 58.587 103.954 15.041 1.00 54.56 O
ATOM 17 N3 C A 223 56.559 102.975 14.833 1.00 55.37 N
ATOM 18 C4 C A 223 55.233 103.123 14.733 1.00 55.64 C
ATOM 19 N4 C A 223 54.490 102.021 14.641 1.00 58.38 N
ATOM 20 C5 C A 223 54.612 104.407 14.721 1.00 53.85 C
ATOM 21 C6 C A 223 55.409 105.477 14.805 1.00 54.50 C
ATOM 22 P A A 224 58.269 108.230 10.561 1.00 54.25 P
ATOM 23 OP1 A A 224 58.968 109.304 9.812 1.00 57.78 O
ATOM 24 OP2 A A 224 56.902 107.818 10.151 1.00 55.30 O
ATOM 25 O5' A A 224 59.224 106.962 10.624 1.00 51.87 O
TER
ATOM 1 O3' C B 223 58.154 108.661 12.101 1.00 56.66 O
ATOM 2 P A B 224 58.269 108.230 10.561 1.00 54.25 P
ATOM 3 OP1 A B 224 58.968 109.304 9.812 1.00 57.78 O
ATOM 4 OP2 A B 224 56.902 107.818 10.151 1.00 55.30 O
ATOM 5 O5' A B 224 59.224 106.962 10.624 1.00 51.87 O
ATOM 6 C5' A B 224 59.942 106.504 9.479 1.00 52.33 C
ATOM 7 C4' A B 224 61.417 106.464 9.784 1.00 53.49 C
ATOM 8 O4' A B 224 61.954 107.808 9.713 1.00 53.73 O
ATOM 9 C3' A B 224 61.784 105.932 11.167 1.00 54.42 C
ATOM 10 O3' A B 224 63.059 105.307 11.118 1.00 56.64 O
ATOM 11 C2' A B 224 61.925 107.220 11.970 1.00 54.52 C
ATOM 12 O2' A B 224 62.754 107.080 13.102 1.00 55.82 O
ATOM 13 C1' A B 224 62.581 108.123 10.934 1.00 54.09 C
ATOM 14 N9 A B 224 62.471 109.562 11.154 1.00 52.65 N
ATOM 15 C8 A B 224 61.384 110.386 10.988 1.00 52.68 C
ATOM 16 N7 A B 224 61.639 111.650 11.217 1.00 51.05 N
ATOM 17 C5 A B 224 62.981 111.657 11.568 1.00 50.82 C
ATOM 18 C6 A B 224 63.854 112.691 11.924 1.00 50.99 C
ATOM 19 N6 A B 224 63.488 113.973 11.987 1.00 51.32 N
ATOM 20 N1 A B 224 65.132 112.361 12.220 1.00 51.64 N
ATOM 21 C2 A B 224 65.492 111.071 12.166 1.00 52.06 C
ATOM 22 N3 A B 224 64.761 110.009 11.848 1.00 51.38 N
ATOM 23 C4 A B 224 63.500 110.376 11.551 1.00 51.66 C
ATOM 24 P G B 225 63.222 103.852 10.451 1.00 59.23 P
ATOM 25 OP1 G B 225 62.010 103.604 9.628 1.00 58.81 O
ATOM 26 OP2 G B 225 63.620 102.859 11.485 1.00 62.13 O
ATOM 27 O5' G B 225 64.481 104.057 9.496 1.00 60.53 O
TER
ATOM 2 P C A 223 53.663 110.468 15.169 1.00 59.53 P
ATOM 3 OP1 C A 223 53.636 111.874 14.679 1.00 60.83 O
ATOM 4 OP2 C A 223 52.745 109.460 14.569 1.00 60.10 O
ATOM 5 O5' C A 223 55.151 109.919 15.063 1.00 56.79 O
ATOM 6 C5' C A 223 55.612 109.247 13.896 1.00 56.06 C
ATOM 7 C4' C A 223 56.946 108.613 14.175 1.00 56.07 C
ATOM 8 O4' C A 223 56.812 107.663 15.262 1.00 56.31 O
ATOM 9 C3' C A 223 57.508 107.798 13.031 1.00 55.51 C
ATOM 10 O3' C A 223 58.154 108.661 12.101 1.00 56.66 O
ATOM 11 C2' C A 223 58.440 106.828 13.751 1.00 53.96 C
ATOM 12 O2' C A 223 59.667 107.398 14.152 1.00 51.84 O
ATOM 13 C1' C A 223 57.634 106.532 15.015 1.00 54.31 C
ATOM 14 N1 C A 223 56.769 105.343 14.912 1.00 53.79 N
ATOM 15 C2 C A 223 57.355 104.061 14.931 1.00 54.31 C
ATOM 16 O2 C A 223 58.587 103.954 15.041 1.00 54.56 O
ATOM 17 N3 C A 223 56.559 102.975 14.833 1.00 55.37 N
ATOM 18 C4 C A 223 55.233 103.123 14.733 1.00 55.64 C
ATOM 19 N4 C A 223 54.490 102.021 14.641 1.00 58.38 N
ATOM 20 C5 C A 223 54.612 104.407 14.721 1.00 53.85 C
ATOM 21 C6 C A 223 55.409 105.477 14.805 1.00 54.50 C
ATOM 22 P A A 224 58.269 108.230 10.561 1.00 54.25 P
ATOM 23 OP1 A A 224 58.968 109.304 9.812 1.00 57.78 O
ATOM 24 OP2 A A 224 56.902 107.818 10.151 1.00 55.30 O
ATOM 25 O5' A A 224 59.224 106.962 10.624 1.00 51.87 O
TER
ATOM 1 O3' C B 223 58.154 108.661 12.101 1.00 56.66 O
ATOM 2 P A B 224 58.269 108.230 10.561 1.00 54.25 P
ATOM 3 OP1 A B 224 58.968 109.304 9.812 1.00 57.78 O
ATOM 4 OP2 A B 224 56.902 107.818 10.151 1.00 55.30 O
ATOM 5 O5' A B 224 59.224 106.962 10.624 1.00 51.87 O
ATOM 6 C5' A B 224 59.942 106.504 9.479 1.00 52.33 C
ATOM 7 C4' A B 224 61.417 106.464 9.784 1.00 53.49 C
ATOM 8 O4' A B 224 61.954 107.808 9.713 1.00 53.73 O
ATOM 9 C3' A B 224 61.784 105.932 11.167 1.00 54.42 C
ATOM 10 O3' A B 224 63.059 105.307 11.118 1.00 56.64 O
ATOM 11 C2' A B 224 61.925 107.220 11.970 1.00 54.52 C
ATOM 12 O2' A B 224 62.754 107.080 13.102 1.00 55.82 O
ATOM 13 C1' A B 224 62.581 108.123 10.934 1.00 54.09 C
ATOM 14 N9 A B 224 62.471 109.562 11.154 1.00 52.65 N
ATOM 15 C8 A B 224 61.384 110.386 10.988 1.00 52.68 C
ATOM 16 N7 A B 224 61.639 111.650 11.217 1.00 51.05 N
ATOM 17 C5 A B 224 62.981 111.657 11.568 1.00 50.82 C
ATOM 18 C6 A B 224 63.854 112.691 11.924 1.00 50.99 C
ATOM 19 N6 A B 224 63.488 113.973 11.987 1.00 51.32 N
ATOM 20 N1 A B 224 65.132 112.361 12.220 1.00 51.64 N
ATOM 21 C2 A B 224 65.492 111.071 12.166 1.00 52.06 C
ATOM 22 N3 A B 224 64.761 110.009 11.848 1.00 51.38 N
ATOM 23 C4 A B 224 63.500 110.376 11.551 1.00 51.66 C
ATOM 24 P G B 225 63.222 103.852 10.451 1.00 59.23 P
ATOM 25 OP1 G B 225 62.010 103.604 9.628 1.00 58.81 O
ATOM 26 OP2 G B 225 63.620 102.859 11.485 1.00 62.13 O
ATOM 27 O5' G B 225 64.481 104.057 9.496 1.00 60.53 O
TER
Atoms:
C2: (57.355,104.061,14.931)
OP1: (53.636,111.874,14.679)
OP2: (52.745,109.460,14.569)
C4: (55.233,103.123,14.733)
O5': (55.151,109.919,15.063)
C3': (57.508,107.798,13.031)
C1': (57.634,106.532,15.015)
O4': (56.812,107.663,15.262)
C5': (55.612,109.247,13.896)
P: (53.663,110.468,15.169)
O2: (58.587,103.954,15.041)
C4': (56.946,108.613,14.175)
C2': (58.440,106.828,13.751)
O2': (59.667,107.398,14.152)
N1: (56.769,105.343,14.912)
N3: (56.559,102.975,14.833)
N4: (54.490,102.021,14.641)
C6: (55.409,105.477,14.805)
C5: (54.612,104.407,14.721)
O3': (58.154,108.661,12.101)
OP1: (53.636,111.874,14.679)
OP2: (52.745,109.460,14.569)
C4: (55.233,103.123,14.733)
O5': (55.151,109.919,15.063)
C3': (57.508,107.798,13.031)
C1': (57.634,106.532,15.015)
O4': (56.812,107.663,15.262)
C5': (55.612,109.247,13.896)
P: (53.663,110.468,15.169)
O2: (58.587,103.954,15.041)
C4': (56.946,108.613,14.175)
C2': (58.440,106.828,13.751)
O2': (59.667,107.398,14.152)
N1: (56.769,105.343,14.912)
N3: (56.559,102.975,14.833)
N4: (54.490,102.021,14.641)
C6: (55.409,105.477,14.805)
C5: (54.612,104.407,14.721)
O3': (58.154,108.661,12.101)
OP1: (58.968,109.304,9.812)
OP2: (56.902,107.818,10.151)
C3': (61.784,105.932,11.167)
C1': (62.581,108.123,10.934)
C5': (59.942,106.504,9.479)
O4': (61.954,107.808,9.713)
C8: (61.384,110.386,10.988)
O2': (62.754,107.080,13.102)
C6: (63.854,112.691,11.924)
C5: (62.981,111.657,11.568)
C4: (63.500,110.376,11.551)
P: (58.269,108.230,10.561)
C4': (61.417,106.464,9.784)
C2': (61.925,107.220,11.970)
C2: (65.492,111.071,12.166)
N1: (65.132,112.361,12.220)
N3: (64.761,110.009,11.848)
N6: (63.488,113.973,11.987)
N7: (61.639,111.650,11.217)
N9: (62.471,109.562,11.154)
O5': (59.224,106.962,10.624)
O3': (63.059,105.307,11.118)
OP2: (56.902,107.818,10.151)
C3': (61.784,105.932,11.167)
C1': (62.581,108.123,10.934)
C5': (59.942,106.504,9.479)
O4': (61.954,107.808,9.713)
C8: (61.384,110.386,10.988)
O2': (62.754,107.080,13.102)
C6: (63.854,112.691,11.924)
C5: (62.981,111.657,11.568)
C4: (63.500,110.376,11.551)
P: (58.269,108.230,10.561)
C4': (61.417,106.464,9.784)
C2': (61.925,107.220,11.970)
C2: (65.492,111.071,12.166)
N1: (65.132,112.361,12.220)
N3: (64.761,110.009,11.848)
N6: (63.488,113.973,11.987)
N7: (61.639,111.650,11.217)
N9: (62.471,109.562,11.154)
O5': (59.224,106.962,10.624)
O3': (63.059,105.307,11.118)
Image (generated by PyMOL):