Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQK:0223:0224
Extra
PDB:
ATOM 1 O3' A A 222 53.132 109.524 16.652 1.00 48.44 O
ATOM 2 P C A 223 53.328 109.381 15.061 1.00 51.10 P
ATOM 3 OP1 C A 223 53.252 110.756 14.500 1.00 53.63 O
ATOM 4 OP2 C A 223 52.438 108.316 14.527 1.00 49.84 O
ATOM 5 O5' C A 223 54.834 108.891 14.950 1.00 49.83 O
ATOM 6 C5' C A 223 55.306 108.209 13.803 1.00 46.84 C
ATOM 7 C4' C A 223 56.674 107.652 14.077 1.00 45.82 C
ATOM 8 O4' C A 223 56.617 106.749 15.211 1.00 46.59 O
ATOM 9 C3' C A 223 57.222 106.818 12.942 1.00 44.74 C
ATOM 10 O3' C A 223 57.841 107.667 11.981 1.00 47.87 O
ATOM 11 C2' C A 223 58.170 105.873 13.660 1.00 42.26 C
ATOM 12 O2' C A 223 59.380 106.494 14.023 1.00 42.09 O
ATOM 13 C1' C A 223 57.382 105.585 14.938 1.00 41.90 C
ATOM 14 N1 C A 223 56.453 104.446 14.814 1.00 38.07 N
ATOM 15 C2 C A 223 56.970 103.143 14.727 1.00 37.85 C
ATOM 16 O2 C A 223 58.198 102.967 14.799 1.00 37.98 O
ATOM 17 N3 C A 223 56.116 102.107 14.572 1.00 37.56 N
ATOM 18 C4 C A 223 54.797 102.327 14.520 1.00 39.27 C
ATOM 19 N4 C A 223 53.995 101.276 14.346 1.00 39.36 N
ATOM 20 C5 C A 223 54.243 103.636 14.635 1.00 37.35 C
ATOM 21 C6 C A 223 55.098 104.653 14.775 1.00 39.48 C
ATOM 22 P A A 224 57.973 107.182 10.460 1.00 46.13 P
ATOM 23 OP1 A A 224 58.557 108.292 9.665 1.00 52.75 O
ATOM 24 OP2 A A 224 56.643 106.645 10.096 1.00 48.37 O
ATOM 25 O5' A A 224 59.046 106.011 10.565 1.00 44.83 O
TER
ATOM 1 O3' C B 223 57.841 107.667 11.981 1.00 47.87 O
ATOM 2 P A B 224 57.973 107.182 10.460 1.00 46.13 P
ATOM 3 OP1 A B 224 58.557 108.292 9.665 1.00 52.75 O
ATOM 4 OP2 A B 224 56.643 106.645 10.096 1.00 48.37 O
ATOM 5 O5' A B 224 59.046 106.011 10.565 1.00 44.83 O
ATOM 6 C5' A B 224 59.739 105.496 9.415 1.00 44.80 C
ATOM 7 C4' A B 224 61.224 105.408 9.703 1.00 44.75 C
ATOM 8 O4' A B 224 61.804 106.736 9.606 1.00 46.04 O
ATOM 9 C3' A B 224 61.594 104.890 11.093 1.00 45.07 C
ATOM 10 O3' A B 224 62.891 104.299 11.079 1.00 47.70 O
ATOM 11 C2' A B 224 61.710 106.188 11.886 1.00 45.08 C
ATOM 12 O2' A B 224 62.526 106.064 13.031 1.00 43.68 O
ATOM 13 C1' A B 224 62.372 107.095 10.849 1.00 44.19 C
ATOM 14 N9 A B 224 62.175 108.532 11.042 1.00 43.06 N
ATOM 15 C8 A B 224 61.034 109.274 10.836 1.00 42.34 C
ATOM 16 N7 A B 224 61.194 110.557 11.046 1.00 39.76 N
ATOM 17 C5 A B 224 62.523 110.667 11.428 1.00 39.62 C
ATOM 18 C6 A B 224 63.308 111.769 11.785 1.00 38.99 C
ATOM 19 N6 A B 224 62.848 113.018 11.810 1.00 37.35 N
ATOM 20 N1 A B 224 64.597 111.544 12.121 1.00 40.21 N
ATOM 21 C2 A B 224 65.055 110.282 12.101 1.00 42.25 C
ATOM 22 N3 A B 224 64.412 109.158 11.780 1.00 42.25 N
ATOM 23 C4 A B 224 63.135 109.426 11.445 1.00 41.19 C
ATOM 24 P G B 225 63.122 102.841 10.443 1.00 47.29 P
ATOM 25 OP1 G B 225 61.885 102.472 9.714 1.00 49.91 O
ATOM 26 OP2 G B 225 63.652 101.945 11.486 1.00 50.71 O
ATOM 27 O5' G B 225 64.308 103.092 9.407 1.00 48.65 O
TER
ATOM 2 P C A 223 53.328 109.381 15.061 1.00 51.10 P
ATOM 3 OP1 C A 223 53.252 110.756 14.500 1.00 53.63 O
ATOM 4 OP2 C A 223 52.438 108.316 14.527 1.00 49.84 O
ATOM 5 O5' C A 223 54.834 108.891 14.950 1.00 49.83 O
ATOM 6 C5' C A 223 55.306 108.209 13.803 1.00 46.84 C
ATOM 7 C4' C A 223 56.674 107.652 14.077 1.00 45.82 C
ATOM 8 O4' C A 223 56.617 106.749 15.211 1.00 46.59 O
ATOM 9 C3' C A 223 57.222 106.818 12.942 1.00 44.74 C
ATOM 10 O3' C A 223 57.841 107.667 11.981 1.00 47.87 O
ATOM 11 C2' C A 223 58.170 105.873 13.660 1.00 42.26 C
ATOM 12 O2' C A 223 59.380 106.494 14.023 1.00 42.09 O
ATOM 13 C1' C A 223 57.382 105.585 14.938 1.00 41.90 C
ATOM 14 N1 C A 223 56.453 104.446 14.814 1.00 38.07 N
ATOM 15 C2 C A 223 56.970 103.143 14.727 1.00 37.85 C
ATOM 16 O2 C A 223 58.198 102.967 14.799 1.00 37.98 O
ATOM 17 N3 C A 223 56.116 102.107 14.572 1.00 37.56 N
ATOM 18 C4 C A 223 54.797 102.327 14.520 1.00 39.27 C
ATOM 19 N4 C A 223 53.995 101.276 14.346 1.00 39.36 N
ATOM 20 C5 C A 223 54.243 103.636 14.635 1.00 37.35 C
ATOM 21 C6 C A 223 55.098 104.653 14.775 1.00 39.48 C
ATOM 22 P A A 224 57.973 107.182 10.460 1.00 46.13 P
ATOM 23 OP1 A A 224 58.557 108.292 9.665 1.00 52.75 O
ATOM 24 OP2 A A 224 56.643 106.645 10.096 1.00 48.37 O
ATOM 25 O5' A A 224 59.046 106.011 10.565 1.00 44.83 O
TER
ATOM 1 O3' C B 223 57.841 107.667 11.981 1.00 47.87 O
ATOM 2 P A B 224 57.973 107.182 10.460 1.00 46.13 P
ATOM 3 OP1 A B 224 58.557 108.292 9.665 1.00 52.75 O
ATOM 4 OP2 A B 224 56.643 106.645 10.096 1.00 48.37 O
ATOM 5 O5' A B 224 59.046 106.011 10.565 1.00 44.83 O
ATOM 6 C5' A B 224 59.739 105.496 9.415 1.00 44.80 C
ATOM 7 C4' A B 224 61.224 105.408 9.703 1.00 44.75 C
ATOM 8 O4' A B 224 61.804 106.736 9.606 1.00 46.04 O
ATOM 9 C3' A B 224 61.594 104.890 11.093 1.00 45.07 C
ATOM 10 O3' A B 224 62.891 104.299 11.079 1.00 47.70 O
ATOM 11 C2' A B 224 61.710 106.188 11.886 1.00 45.08 C
ATOM 12 O2' A B 224 62.526 106.064 13.031 1.00 43.68 O
ATOM 13 C1' A B 224 62.372 107.095 10.849 1.00 44.19 C
ATOM 14 N9 A B 224 62.175 108.532 11.042 1.00 43.06 N
ATOM 15 C8 A B 224 61.034 109.274 10.836 1.00 42.34 C
ATOM 16 N7 A B 224 61.194 110.557 11.046 1.00 39.76 N
ATOM 17 C5 A B 224 62.523 110.667 11.428 1.00 39.62 C
ATOM 18 C6 A B 224 63.308 111.769 11.785 1.00 38.99 C
ATOM 19 N6 A B 224 62.848 113.018 11.810 1.00 37.35 N
ATOM 20 N1 A B 224 64.597 111.544 12.121 1.00 40.21 N
ATOM 21 C2 A B 224 65.055 110.282 12.101 1.00 42.25 C
ATOM 22 N3 A B 224 64.412 109.158 11.780 1.00 42.25 N
ATOM 23 C4 A B 224 63.135 109.426 11.445 1.00 41.19 C
ATOM 24 P G B 225 63.122 102.841 10.443 1.00 47.29 P
ATOM 25 OP1 G B 225 61.885 102.472 9.714 1.00 49.91 O
ATOM 26 OP2 G B 225 63.652 101.945 11.486 1.00 50.71 O
ATOM 27 O5' G B 225 64.308 103.092 9.407 1.00 48.65 O
TER
Atoms:
C2: (56.970,103.143,14.727)
OP1: (53.252,110.756,14.500)
OP2: (52.438,108.316,14.527)
C4: (54.797,102.327,14.520)
O5': (54.834,108.891,14.950)
C3': (57.222,106.818,12.942)
C1': (57.382,105.585,14.938)
O4': (56.617,106.749,15.211)
C5': (55.306,108.209,13.803)
P: (53.328,109.381,15.061)
O2: (58.198,102.967,14.799)
C4': (56.674,107.652,14.077)
C2': (58.170,105.873,13.660)
O2': (59.380,106.494,14.023)
N1: (56.453,104.446,14.814)
N3: (56.116,102.107,14.572)
N4: (53.995,101.276,14.346)
C6: (55.098,104.653,14.775)
C5: (54.243,103.636,14.635)
O3': (57.841,107.667,11.981)
OP1: (53.252,110.756,14.500)
OP2: (52.438,108.316,14.527)
C4: (54.797,102.327,14.520)
O5': (54.834,108.891,14.950)
C3': (57.222,106.818,12.942)
C1': (57.382,105.585,14.938)
O4': (56.617,106.749,15.211)
C5': (55.306,108.209,13.803)
P: (53.328,109.381,15.061)
O2: (58.198,102.967,14.799)
C4': (56.674,107.652,14.077)
C2': (58.170,105.873,13.660)
O2': (59.380,106.494,14.023)
N1: (56.453,104.446,14.814)
N3: (56.116,102.107,14.572)
N4: (53.995,101.276,14.346)
C6: (55.098,104.653,14.775)
C5: (54.243,103.636,14.635)
O3': (57.841,107.667,11.981)
OP1: (58.557,108.292,9.665)
OP2: (56.643,106.645,10.096)
C3': (61.594,104.890,11.093)
C1': (62.372,107.095,10.849)
C5': (59.739,105.496,9.415)
O4': (61.804,106.736,9.606)
C8: (61.034,109.274,10.836)
O2': (62.526,106.064,13.031)
C6: (63.308,111.769,11.785)
C5: (62.523,110.667,11.428)
C4: (63.135,109.426,11.445)
P: (57.973,107.182,10.460)
C4': (61.224,105.408,9.703)
C2': (61.710,106.188,11.886)
C2: (65.055,110.282,12.101)
N1: (64.597,111.544,12.121)
N3: (64.412,109.158,11.780)
N6: (62.848,113.018,11.810)
N7: (61.194,110.557,11.046)
N9: (62.175,108.532,11.042)
O5': (59.046,106.011,10.565)
O3': (62.891,104.299,11.079)
OP2: (56.643,106.645,10.096)
C3': (61.594,104.890,11.093)
C1': (62.372,107.095,10.849)
C5': (59.739,105.496,9.415)
O4': (61.804,106.736,9.606)
C8: (61.034,109.274,10.836)
O2': (62.526,106.064,13.031)
C6: (63.308,111.769,11.785)
C5: (62.523,110.667,11.428)
C4: (63.135,109.426,11.445)
P: (57.973,107.182,10.460)
C4': (61.224,105.408,9.703)
C2': (61.710,106.188,11.886)
C2: (65.055,110.282,12.101)
N1: (64.597,111.544,12.121)
N3: (64.412,109.158,11.780)
N6: (62.848,113.018,11.810)
N7: (61.194,110.557,11.046)
N9: (62.175,108.532,11.042)
O5': (59.046,106.011,10.565)
O3': (62.891,104.299,11.079)
Image (generated by PyMOL):