Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQM:0223:0224
Extra
PDB:
ATOM 1 O3' A A 222 53.056 109.456 16.593 1.00 53.88 O
ATOM 2 P C A 223 53.254 109.336 15.001 1.00 56.33 P
ATOM 3 OP1 C A 223 53.221 110.721 14.460 1.00 59.35 O
ATOM 4 OP2 C A 223 52.344 108.303 14.438 1.00 55.92 O
ATOM 5 O5' C A 223 54.748 108.814 14.892 1.00 55.66 O
ATOM 6 C5' C A 223 55.217 108.137 13.745 1.00 53.44 C
ATOM 7 C4' C A 223 56.565 107.547 14.040 1.00 53.13 C
ATOM 8 O4' C A 223 56.454 106.628 15.157 1.00 53.42 O
ATOM 9 C3' C A 223 57.139 106.719 12.912 1.00 52.22 C
ATOM 10 O3' C A 223 57.787 107.571 11.972 1.00 54.65 O
ATOM 11 C2' C A 223 58.070 105.774 13.653 1.00 50.06 C
ATOM 12 O2' C A 223 59.262 106.403 14.055 1.00 47.82 O
ATOM 13 C1' C A 223 57.247 105.475 14.909 1.00 49.97 C
ATOM 14 N1 C A 223 56.343 104.311 14.762 1.00 47.38 N
ATOM 15 C2 C A 223 56.895 103.021 14.691 1.00 46.95 C
ATOM 16 O2 C A 223 58.124 102.882 14.777 1.00 45.52 O
ATOM 17 N3 C A 223 56.072 101.960 14.530 1.00 47.20 N
ATOM 18 C4 C A 223 54.751 102.145 14.440 1.00 47.91 C
ATOM 19 N4 C A 223 53.984 101.071 14.249 1.00 48.09 N
ATOM 20 C5 C A 223 54.161 103.440 14.531 1.00 46.79 C
ATOM 21 C6 C A 223 54.985 104.483 14.687 1.00 48.18 C
ATOM 22 P A A 224 57.871 107.133 10.434 1.00 54.06 P
ATOM 23 OP1 A A 224 58.525 108.224 9.671 1.00 57.21 O
ATOM 24 OP2 A A 224 56.495 106.700 10.064 1.00 53.61 O
ATOM 25 O5' A A 224 58.859 105.884 10.494 1.00 52.34 O
TER
ATOM 1 O3' C B 223 57.787 107.571 11.972 1.00 54.65 O
ATOM 2 P A B 224 57.871 107.133 10.434 1.00 54.06 P
ATOM 3 OP1 A B 224 58.525 108.224 9.671 1.00 57.21 O
ATOM 4 OP2 A B 224 56.495 106.700 10.064 1.00 53.61 O
ATOM 5 O5' A B 224 58.859 105.884 10.494 1.00 52.34 O
ATOM 6 C5' A B 224 59.587 105.422 9.342 1.00 52.92 C
ATOM 7 C4' A B 224 61.073 105.382 9.643 1.00 52.25 C
ATOM 8 O4' A B 224 61.606 106.728 9.560 1.00 52.16 O
ATOM 9 C3' A B 224 61.485 104.846 11.015 1.00 51.62 C
ATOM 10 O3' A B 224 62.798 104.281 10.950 1.00 54.59 O
ATOM 11 C2' A B 224 61.600 106.136 11.827 1.00 51.09 C
ATOM 12 O2' A B 224 62.454 106.010 12.947 1.00 48.73 O
ATOM 13 C1' A B 224 62.219 107.070 10.787 1.00 50.25 C
ATOM 14 N9 A B 224 62.037 108.508 10.996 1.00 48.78 N
ATOM 15 C8 A B 224 60.901 109.257 10.788 1.00 48.61 C
ATOM 16 N7 A B 224 61.069 110.539 10.986 1.00 45.35 N
ATOM 17 C5 A B 224 62.400 110.642 11.367 1.00 44.75 C
ATOM 18 C6 A B 224 63.190 111.741 11.712 1.00 43.13 C
ATOM 19 N6 A B 224 62.734 112.993 11.730 1.00 43.41 N
ATOM 20 N1 A B 224 64.477 111.512 12.046 1.00 43.03 N
ATOM 21 C2 A B 224 64.925 110.249 12.043 1.00 46.11 C
ATOM 22 N3 A B 224 64.274 109.127 11.740 1.00 46.61 N
ATOM 23 C4 A B 224 63.002 109.398 11.399 1.00 45.39 C
ATOM 24 P G B 225 63.027 102.788 10.391 1.00 53.34 P
ATOM 25 OP1 G B 225 61.805 102.414 9.650 1.00 56.81 O
ATOM 26 OP2 G B 225 63.532 101.911 11.466 1.00 55.03 O
ATOM 27 O5' G B 225 64.244 102.973 9.380 1.00 54.65 O
TER
ATOM 2 P C A 223 53.254 109.336 15.001 1.00 56.33 P
ATOM 3 OP1 C A 223 53.221 110.721 14.460 1.00 59.35 O
ATOM 4 OP2 C A 223 52.344 108.303 14.438 1.00 55.92 O
ATOM 5 O5' C A 223 54.748 108.814 14.892 1.00 55.66 O
ATOM 6 C5' C A 223 55.217 108.137 13.745 1.00 53.44 C
ATOM 7 C4' C A 223 56.565 107.547 14.040 1.00 53.13 C
ATOM 8 O4' C A 223 56.454 106.628 15.157 1.00 53.42 O
ATOM 9 C3' C A 223 57.139 106.719 12.912 1.00 52.22 C
ATOM 10 O3' C A 223 57.787 107.571 11.972 1.00 54.65 O
ATOM 11 C2' C A 223 58.070 105.774 13.653 1.00 50.06 C
ATOM 12 O2' C A 223 59.262 106.403 14.055 1.00 47.82 O
ATOM 13 C1' C A 223 57.247 105.475 14.909 1.00 49.97 C
ATOM 14 N1 C A 223 56.343 104.311 14.762 1.00 47.38 N
ATOM 15 C2 C A 223 56.895 103.021 14.691 1.00 46.95 C
ATOM 16 O2 C A 223 58.124 102.882 14.777 1.00 45.52 O
ATOM 17 N3 C A 223 56.072 101.960 14.530 1.00 47.20 N
ATOM 18 C4 C A 223 54.751 102.145 14.440 1.00 47.91 C
ATOM 19 N4 C A 223 53.984 101.071 14.249 1.00 48.09 N
ATOM 20 C5 C A 223 54.161 103.440 14.531 1.00 46.79 C
ATOM 21 C6 C A 223 54.985 104.483 14.687 1.00 48.18 C
ATOM 22 P A A 224 57.871 107.133 10.434 1.00 54.06 P
ATOM 23 OP1 A A 224 58.525 108.224 9.671 1.00 57.21 O
ATOM 24 OP2 A A 224 56.495 106.700 10.064 1.00 53.61 O
ATOM 25 O5' A A 224 58.859 105.884 10.494 1.00 52.34 O
TER
ATOM 1 O3' C B 223 57.787 107.571 11.972 1.00 54.65 O
ATOM 2 P A B 224 57.871 107.133 10.434 1.00 54.06 P
ATOM 3 OP1 A B 224 58.525 108.224 9.671 1.00 57.21 O
ATOM 4 OP2 A B 224 56.495 106.700 10.064 1.00 53.61 O
ATOM 5 O5' A B 224 58.859 105.884 10.494 1.00 52.34 O
ATOM 6 C5' A B 224 59.587 105.422 9.342 1.00 52.92 C
ATOM 7 C4' A B 224 61.073 105.382 9.643 1.00 52.25 C
ATOM 8 O4' A B 224 61.606 106.728 9.560 1.00 52.16 O
ATOM 9 C3' A B 224 61.485 104.846 11.015 1.00 51.62 C
ATOM 10 O3' A B 224 62.798 104.281 10.950 1.00 54.59 O
ATOM 11 C2' A B 224 61.600 106.136 11.827 1.00 51.09 C
ATOM 12 O2' A B 224 62.454 106.010 12.947 1.00 48.73 O
ATOM 13 C1' A B 224 62.219 107.070 10.787 1.00 50.25 C
ATOM 14 N9 A B 224 62.037 108.508 10.996 1.00 48.78 N
ATOM 15 C8 A B 224 60.901 109.257 10.788 1.00 48.61 C
ATOM 16 N7 A B 224 61.069 110.539 10.986 1.00 45.35 N
ATOM 17 C5 A B 224 62.400 110.642 11.367 1.00 44.75 C
ATOM 18 C6 A B 224 63.190 111.741 11.712 1.00 43.13 C
ATOM 19 N6 A B 224 62.734 112.993 11.730 1.00 43.41 N
ATOM 20 N1 A B 224 64.477 111.512 12.046 1.00 43.03 N
ATOM 21 C2 A B 224 64.925 110.249 12.043 1.00 46.11 C
ATOM 22 N3 A B 224 64.274 109.127 11.740 1.00 46.61 N
ATOM 23 C4 A B 224 63.002 109.398 11.399 1.00 45.39 C
ATOM 24 P G B 225 63.027 102.788 10.391 1.00 53.34 P
ATOM 25 OP1 G B 225 61.805 102.414 9.650 1.00 56.81 O
ATOM 26 OP2 G B 225 63.532 101.911 11.466 1.00 55.03 O
ATOM 27 O5' G B 225 64.244 102.973 9.380 1.00 54.65 O
TER
Atoms:
C2: (56.895,103.021,14.691)
OP1: (53.221,110.721,14.460)
OP2: (52.344,108.303,14.438)
C4: (54.751,102.145,14.440)
O5': (54.748,108.814,14.892)
C3': (57.139,106.719,12.912)
C1': (57.247,105.475,14.909)
O4': (56.454,106.628,15.157)
C5': (55.217,108.137,13.745)
P: (53.254,109.336,15.001)
O2: (58.124,102.882,14.777)
C4': (56.565,107.547,14.040)
C2': (58.070,105.774,13.653)
O2': (59.262,106.403,14.055)
N1: (56.343,104.311,14.762)
N3: (56.072,101.960,14.530)
N4: (53.984,101.071,14.249)
C6: (54.985,104.483,14.687)
C5: (54.161,103.440,14.531)
O3': (57.787,107.571,11.972)
OP1: (53.221,110.721,14.460)
OP2: (52.344,108.303,14.438)
C4: (54.751,102.145,14.440)
O5': (54.748,108.814,14.892)
C3': (57.139,106.719,12.912)
C1': (57.247,105.475,14.909)
O4': (56.454,106.628,15.157)
C5': (55.217,108.137,13.745)
P: (53.254,109.336,15.001)
O2: (58.124,102.882,14.777)
C4': (56.565,107.547,14.040)
C2': (58.070,105.774,13.653)
O2': (59.262,106.403,14.055)
N1: (56.343,104.311,14.762)
N3: (56.072,101.960,14.530)
N4: (53.984,101.071,14.249)
C6: (54.985,104.483,14.687)
C5: (54.161,103.440,14.531)
O3': (57.787,107.571,11.972)
OP1: (58.525,108.224,9.671)
OP2: (56.495,106.700,10.064)
C3': (61.485,104.846,11.015)
C1': (62.219,107.070,10.787)
C5': (59.587,105.422,9.342)
O4': (61.606,106.728,9.560)
C8: (60.901,109.257,10.788)
O2': (62.454,106.010,12.947)
C6: (63.190,111.741,11.712)
C5: (62.400,110.642,11.367)
C4: (63.002,109.398,11.399)
P: (57.871,107.133,10.434)
C4': (61.073,105.382,9.643)
C2': (61.600,106.136,11.827)
C2: (64.925,110.249,12.043)
N1: (64.477,111.512,12.046)
N3: (64.274,109.127,11.740)
N6: (62.734,112.993,11.730)
N7: (61.069,110.539,10.986)
N9: (62.037,108.508,10.996)
O5': (58.859,105.884,10.494)
O3': (62.798,104.281,10.950)
OP2: (56.495,106.700,10.064)
C3': (61.485,104.846,11.015)
C1': (62.219,107.070,10.787)
C5': (59.587,105.422,9.342)
O4': (61.606,106.728,9.560)
C8: (60.901,109.257,10.788)
O2': (62.454,106.010,12.947)
C6: (63.190,111.741,11.712)
C5: (62.400,110.642,11.367)
C4: (63.002,109.398,11.399)
P: (57.871,107.133,10.434)
C4': (61.073,105.382,9.643)
C2': (61.600,106.136,11.827)
C2: (64.925,110.249,12.043)
N1: (64.477,111.512,12.046)
N3: (64.274,109.127,11.740)
N6: (62.734,112.993,11.730)
N7: (61.069,110.539,10.986)
N9: (62.037,108.508,10.996)
O5': (58.859,105.884,10.494)
O3': (62.798,104.281,10.950)
Image (generated by PyMOL):