Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQN:0223:0224
Extra
PDB:
ATOM 1 O3' A A 222 53.112 109.575 16.615 1.00 51.41 O
ATOM 2 P C A 223 53.319 109.419 15.027 1.00 53.85 P
ATOM 3 OP1 C A 223 53.269 110.781 14.440 1.00 56.44 O
ATOM 4 OP2 C A 223 52.424 108.352 14.500 1.00 53.37 O
ATOM 5 O5' C A 223 54.821 108.918 14.940 1.00 53.06 O
ATOM 6 C5' C A 223 55.346 108.351 13.761 1.00 50.95 C
ATOM 7 C4' C A 223 56.685 107.751 14.061 1.00 50.32 C
ATOM 8 O4' C A 223 56.559 106.828 15.170 1.00 51.11 O
ATOM 9 C3' C A 223 57.246 106.920 12.935 1.00 50.97 C
ATOM 10 O3' C A 223 57.893 107.760 11.989 1.00 53.46 O
ATOM 11 C2' C A 223 58.175 105.968 13.672 1.00 48.09 C
ATOM 12 O2' C A 223 59.368 106.607 14.063 1.00 46.91 O
ATOM 13 C1' C A 223 57.351 105.674 14.929 1.00 47.63 C
ATOM 14 N1 C A 223 56.442 104.514 14.805 1.00 45.14 N
ATOM 15 C2 C A 223 56.983 103.221 14.688 1.00 45.26 C
ATOM 16 O2 C A 223 58.216 103.070 14.732 1.00 46.19 O
ATOM 17 N3 C A 223 56.143 102.168 14.540 1.00 43.92 N
ATOM 18 C4 C A 223 54.818 102.366 14.524 1.00 44.99 C
ATOM 19 N4 C A 223 54.029 101.303 14.362 1.00 45.76 N
ATOM 20 C5 C A 223 54.244 103.662 14.669 1.00 43.30 C
ATOM 21 C6 C A 223 55.082 104.695 14.799 1.00 46.01 C
ATOM 22 P A A 224 57.891 107.348 10.444 1.00 52.59 P
ATOM 23 OP1 A A 224 58.627 108.378 9.673 1.00 56.38 O
ATOM 24 OP2 A A 224 56.475 107.048 10.103 1.00 52.02 O
ATOM 25 O5' A A 224 58.760 106.015 10.450 1.00 51.91 O
TER
ATOM 1 O3' C B 223 57.893 107.760 11.989 1.00 53.46 O
ATOM 2 P A B 224 57.891 107.348 10.444 1.00 52.59 P
ATOM 3 OP1 A B 224 58.627 108.378 9.673 1.00 56.38 O
ATOM 4 OP2 A B 224 56.475 107.048 10.103 1.00 52.02 O
ATOM 5 O5' A B 224 58.760 106.015 10.450 1.00 51.91 O
ATOM 6 C5' A B 224 59.469 105.570 9.282 1.00 52.94 C
ATOM 7 C4' A B 224 60.960 105.578 9.537 1.00 52.06 C
ATOM 8 O4' A B 224 61.457 106.940 9.483 1.00 52.50 O
ATOM 9 C3' A B 224 61.437 105.010 10.871 1.00 52.23 C
ATOM 10 O3' A B 224 62.743 104.491 10.692 1.00 54.81 O
ATOM 11 C2' A B 224 61.594 106.270 11.718 1.00 52.80 C
ATOM 12 O2' A B 224 62.511 106.091 12.780 1.00 52.30 O
ATOM 13 C1' A B 224 62.164 107.231 10.674 1.00 51.95 C
ATOM 14 N9 A B 224 62.036 108.665 10.941 1.00 50.36 N
ATOM 15 C8 A B 224 60.928 109.458 10.759 1.00 49.95 C
ATOM 16 N7 A B 224 61.140 110.726 10.997 1.00 47.49 N
ATOM 17 C5 A B 224 62.472 110.771 11.380 1.00 47.42 C
ATOM 18 C6 A B 224 63.299 111.832 11.753 1.00 46.14 C
ATOM 19 N6 A B 224 62.889 113.097 11.783 1.00 46.91 N
ATOM 20 N1 A B 224 64.575 111.549 12.092 1.00 47.42 N
ATOM 21 C2 A B 224 64.980 110.270 12.057 1.00 48.28 C
ATOM 22 N3 A B 224 64.292 109.181 11.715 1.00 48.78 N
ATOM 23 C4 A B 224 63.030 109.507 11.377 1.00 47.88 C
ATOM 24 P G B 225 62.966 102.939 10.358 1.00 52.64 P
ATOM 25 OP1 G B 225 61.965 102.575 9.337 1.00 58.40 O
ATOM 26 OP2 G B 225 63.035 102.178 11.618 1.00 57.21 O
ATOM 27 O5' G B 225 64.430 102.933 9.735 1.00 54.92 O
TER
ATOM 2 P C A 223 53.319 109.419 15.027 1.00 53.85 P
ATOM 3 OP1 C A 223 53.269 110.781 14.440 1.00 56.44 O
ATOM 4 OP2 C A 223 52.424 108.352 14.500 1.00 53.37 O
ATOM 5 O5' C A 223 54.821 108.918 14.940 1.00 53.06 O
ATOM 6 C5' C A 223 55.346 108.351 13.761 1.00 50.95 C
ATOM 7 C4' C A 223 56.685 107.751 14.061 1.00 50.32 C
ATOM 8 O4' C A 223 56.559 106.828 15.170 1.00 51.11 O
ATOM 9 C3' C A 223 57.246 106.920 12.935 1.00 50.97 C
ATOM 10 O3' C A 223 57.893 107.760 11.989 1.00 53.46 O
ATOM 11 C2' C A 223 58.175 105.968 13.672 1.00 48.09 C
ATOM 12 O2' C A 223 59.368 106.607 14.063 1.00 46.91 O
ATOM 13 C1' C A 223 57.351 105.674 14.929 1.00 47.63 C
ATOM 14 N1 C A 223 56.442 104.514 14.805 1.00 45.14 N
ATOM 15 C2 C A 223 56.983 103.221 14.688 1.00 45.26 C
ATOM 16 O2 C A 223 58.216 103.070 14.732 1.00 46.19 O
ATOM 17 N3 C A 223 56.143 102.168 14.540 1.00 43.92 N
ATOM 18 C4 C A 223 54.818 102.366 14.524 1.00 44.99 C
ATOM 19 N4 C A 223 54.029 101.303 14.362 1.00 45.76 N
ATOM 20 C5 C A 223 54.244 103.662 14.669 1.00 43.30 C
ATOM 21 C6 C A 223 55.082 104.695 14.799 1.00 46.01 C
ATOM 22 P A A 224 57.891 107.348 10.444 1.00 52.59 P
ATOM 23 OP1 A A 224 58.627 108.378 9.673 1.00 56.38 O
ATOM 24 OP2 A A 224 56.475 107.048 10.103 1.00 52.02 O
ATOM 25 O5' A A 224 58.760 106.015 10.450 1.00 51.91 O
TER
ATOM 1 O3' C B 223 57.893 107.760 11.989 1.00 53.46 O
ATOM 2 P A B 224 57.891 107.348 10.444 1.00 52.59 P
ATOM 3 OP1 A B 224 58.627 108.378 9.673 1.00 56.38 O
ATOM 4 OP2 A B 224 56.475 107.048 10.103 1.00 52.02 O
ATOM 5 O5' A B 224 58.760 106.015 10.450 1.00 51.91 O
ATOM 6 C5' A B 224 59.469 105.570 9.282 1.00 52.94 C
ATOM 7 C4' A B 224 60.960 105.578 9.537 1.00 52.06 C
ATOM 8 O4' A B 224 61.457 106.940 9.483 1.00 52.50 O
ATOM 9 C3' A B 224 61.437 105.010 10.871 1.00 52.23 C
ATOM 10 O3' A B 224 62.743 104.491 10.692 1.00 54.81 O
ATOM 11 C2' A B 224 61.594 106.270 11.718 1.00 52.80 C
ATOM 12 O2' A B 224 62.511 106.091 12.780 1.00 52.30 O
ATOM 13 C1' A B 224 62.164 107.231 10.674 1.00 51.95 C
ATOM 14 N9 A B 224 62.036 108.665 10.941 1.00 50.36 N
ATOM 15 C8 A B 224 60.928 109.458 10.759 1.00 49.95 C
ATOM 16 N7 A B 224 61.140 110.726 10.997 1.00 47.49 N
ATOM 17 C5 A B 224 62.472 110.771 11.380 1.00 47.42 C
ATOM 18 C6 A B 224 63.299 111.832 11.753 1.00 46.14 C
ATOM 19 N6 A B 224 62.889 113.097 11.783 1.00 46.91 N
ATOM 20 N1 A B 224 64.575 111.549 12.092 1.00 47.42 N
ATOM 21 C2 A B 224 64.980 110.270 12.057 1.00 48.28 C
ATOM 22 N3 A B 224 64.292 109.181 11.715 1.00 48.78 N
ATOM 23 C4 A B 224 63.030 109.507 11.377 1.00 47.88 C
ATOM 24 P G B 225 62.966 102.939 10.358 1.00 52.64 P
ATOM 25 OP1 G B 225 61.965 102.575 9.337 1.00 58.40 O
ATOM 26 OP2 G B 225 63.035 102.178 11.618 1.00 57.21 O
ATOM 27 O5' G B 225 64.430 102.933 9.735 1.00 54.92 O
TER
Atoms:
C2: (56.983,103.221,14.688)
OP1: (53.269,110.781,14.440)
OP2: (52.424,108.352,14.500)
C4: (54.818,102.366,14.524)
O5': (54.821,108.918,14.940)
C3': (57.246,106.920,12.935)
C1': (57.351,105.674,14.929)
O4': (56.559,106.828,15.170)
C5': (55.346,108.351,13.761)
P: (53.319,109.419,15.027)
O2: (58.216,103.070,14.732)
C4': (56.685,107.751,14.061)
C2': (58.175,105.968,13.672)
O2': (59.368,106.607,14.063)
N1: (56.442,104.514,14.805)
N3: (56.143,102.168,14.540)
N4: (54.029,101.303,14.362)
C6: (55.082,104.695,14.799)
C5: (54.244,103.662,14.669)
O3': (57.893,107.760,11.989)
OP1: (53.269,110.781,14.440)
OP2: (52.424,108.352,14.500)
C4: (54.818,102.366,14.524)
O5': (54.821,108.918,14.940)
C3': (57.246,106.920,12.935)
C1': (57.351,105.674,14.929)
O4': (56.559,106.828,15.170)
C5': (55.346,108.351,13.761)
P: (53.319,109.419,15.027)
O2: (58.216,103.070,14.732)
C4': (56.685,107.751,14.061)
C2': (58.175,105.968,13.672)
O2': (59.368,106.607,14.063)
N1: (56.442,104.514,14.805)
N3: (56.143,102.168,14.540)
N4: (54.029,101.303,14.362)
C6: (55.082,104.695,14.799)
C5: (54.244,103.662,14.669)
O3': (57.893,107.760,11.989)
OP1: (58.627,108.378,9.673)
OP2: (56.475,107.048,10.103)
C3': (61.437,105.010,10.871)
C1': (62.164,107.231,10.674)
C5': (59.469,105.570,9.282)
O4': (61.457,106.940,9.483)
C8: (60.928,109.458,10.759)
O2': (62.511,106.091,12.780)
C6: (63.299,111.832,11.753)
C5: (62.472,110.771,11.380)
C4: (63.030,109.507,11.377)
P: (57.891,107.348,10.444)
C4': (60.960,105.578,9.537)
C2': (61.594,106.270,11.718)
C2: (64.980,110.270,12.057)
N1: (64.575,111.549,12.092)
N3: (64.292,109.181,11.715)
N6: (62.889,113.097,11.783)
N7: (61.140,110.726,10.997)
N9: (62.036,108.665,10.941)
O5': (58.760,106.015,10.450)
O3': (62.743,104.491,10.692)
OP2: (56.475,107.048,10.103)
C3': (61.437,105.010,10.871)
C1': (62.164,107.231,10.674)
C5': (59.469,105.570,9.282)
O4': (61.457,106.940,9.483)
C8: (60.928,109.458,10.759)
O2': (62.511,106.091,12.780)
C6: (63.299,111.832,11.753)
C5: (62.472,110.771,11.380)
C4: (63.030,109.507,11.377)
P: (57.891,107.348,10.444)
C4': (60.960,105.578,9.537)
C2': (61.594,106.270,11.718)
C2: (64.980,110.270,12.057)
N1: (64.575,111.549,12.092)
N3: (64.292,109.181,11.715)
N6: (62.889,113.097,11.783)
N7: (61.140,110.726,10.997)
N9: (62.036,108.665,10.941)
O5': (58.760,106.015,10.450)
O3': (62.743,104.491,10.692)
Image (generated by PyMOL):