Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:0223:0224
Extra
PDB:
ATOM 1 O3' A A 222 53.379 109.788 16.668 1.00 39.69 O
ATOM 2 P C A 223 53.583 109.636 15.080 1.00 43.09 P
ATOM 3 OP1 C A 223 53.459 111.000 14.503 1.00 45.36 O
ATOM 4 OP2 C A 223 52.749 108.526 14.539 1.00 41.39 O
ATOM 5 O5' C A 223 55.103 109.197 14.970 1.00 41.98 O
ATOM 6 C5' C A 223 55.587 108.542 13.815 1.00 40.63 C
ATOM 7 C4' C A 223 56.931 107.944 14.102 1.00 40.37 C
ATOM 8 O4' C A 223 56.832 107.016 15.210 1.00 41.91 O
ATOM 9 C3' C A 223 57.455 107.119 12.953 1.00 39.50 C
ATOM 10 O3' C A 223 58.068 107.989 12.010 1.00 39.75 O
ATOM 11 C2' C A 223 58.390 106.143 13.651 1.00 38.36 C
ATOM 12 O2' C A 223 59.624 106.723 14.003 1.00 38.83 O
ATOM 13 C1' C A 223 57.607 105.859 14.935 1.00 39.86 C
ATOM 14 N1 C A 223 56.691 104.705 14.832 1.00 39.10 N
ATOM 15 C2 C A 223 57.224 103.411 14.790 1.00 38.99 C
ATOM 16 O2 C A 223 58.452 103.261 14.866 1.00 40.86 O
ATOM 17 N3 C A 223 56.389 102.358 14.670 1.00 39.22 N
ATOM 18 C4 C A 223 55.069 102.556 14.606 1.00 40.90 C
ATOM 19 N4 C A 223 54.284 101.485 14.480 1.00 43.32 N
ATOM 20 C5 C A 223 54.497 103.858 14.664 1.00 39.21 C
ATOM 21 C6 C A 223 55.335 104.892 14.772 1.00 40.42 C
ATOM 22 P A A 224 58.200 107.536 10.483 1.00 37.95 P
ATOM 23 OP1 A A 224 58.734 108.686 9.712 1.00 41.16 O
ATOM 24 OP2 A A 224 56.885 106.953 10.112 1.00 37.30 O
ATOM 25 O5' A A 224 59.317 106.404 10.582 1.00 33.39 O
TER
ATOM 1 O3' C B 223 58.068 107.989 12.010 1.00 39.75 O
ATOM 2 P A B 224 58.200 107.536 10.483 1.00 37.95 P
ATOM 3 OP1 A B 224 58.734 108.686 9.712 1.00 41.16 O
ATOM 4 OP2 A B 224 56.885 106.953 10.112 1.00 37.30 O
ATOM 5 O5' A B 224 59.317 106.404 10.582 1.00 33.39 O
ATOM 6 C5' A B 224 59.980 105.871 9.427 1.00 34.04 C
ATOM 7 C4' A B 224 61.460 105.732 9.710 1.00 35.08 C
ATOM 8 O4' A B 224 62.065 107.047 9.633 1.00 36.79 O
ATOM 9 C3' A B 224 61.820 105.182 11.091 1.00 34.39 C
ATOM 10 O3' A B 224 63.103 104.564 11.071 1.00 37.69 O
ATOM 11 C2' A B 224 61.985 106.465 11.899 1.00 35.20 C
ATOM 12 O2' A B 224 62.827 106.308 13.021 1.00 34.48 O
ATOM 13 C1' A B 224 62.663 107.364 10.870 1.00 35.24 C
ATOM 14 N9 A B 224 62.514 108.801 11.085 1.00 34.15 N
ATOM 15 C8 A B 224 61.399 109.579 10.889 1.00 33.57 C
ATOM 16 N7 A B 224 61.599 110.853 11.112 1.00 32.92 N
ATOM 17 C5 A B 224 62.932 110.919 11.491 1.00 31.53 C
ATOM 18 C6 A B 224 63.752 111.993 11.851 1.00 31.07 C
ATOM 19 N6 A B 224 63.330 113.255 11.886 1.00 31.97 N
ATOM 20 N1 A B 224 65.037 111.725 12.178 1.00 32.32 N
ATOM 21 C2 A B 224 65.455 110.451 12.145 1.00 33.72 C
ATOM 22 N3 A B 224 64.774 109.350 11.821 1.00 33.96 N
ATOM 23 C4 A B 224 63.504 109.660 11.496 1.00 33.20 C
ATOM 24 P G B 225 63.315 103.120 10.393 1.00 38.06 P
ATOM 25 OP1 G B 225 62.046 102.735 9.734 1.00 39.47 O
ATOM 26 OP2 G B 225 63.932 102.213 11.393 1.00 39.45 O
ATOM 27 O5' G B 225 64.421 103.425 9.286 1.00 39.44 O
TER
ATOM 2 P C A 223 53.583 109.636 15.080 1.00 43.09 P
ATOM 3 OP1 C A 223 53.459 111.000 14.503 1.00 45.36 O
ATOM 4 OP2 C A 223 52.749 108.526 14.539 1.00 41.39 O
ATOM 5 O5' C A 223 55.103 109.197 14.970 1.00 41.98 O
ATOM 6 C5' C A 223 55.587 108.542 13.815 1.00 40.63 C
ATOM 7 C4' C A 223 56.931 107.944 14.102 1.00 40.37 C
ATOM 8 O4' C A 223 56.832 107.016 15.210 1.00 41.91 O
ATOM 9 C3' C A 223 57.455 107.119 12.953 1.00 39.50 C
ATOM 10 O3' C A 223 58.068 107.989 12.010 1.00 39.75 O
ATOM 11 C2' C A 223 58.390 106.143 13.651 1.00 38.36 C
ATOM 12 O2' C A 223 59.624 106.723 14.003 1.00 38.83 O
ATOM 13 C1' C A 223 57.607 105.859 14.935 1.00 39.86 C
ATOM 14 N1 C A 223 56.691 104.705 14.832 1.00 39.10 N
ATOM 15 C2 C A 223 57.224 103.411 14.790 1.00 38.99 C
ATOM 16 O2 C A 223 58.452 103.261 14.866 1.00 40.86 O
ATOM 17 N3 C A 223 56.389 102.358 14.670 1.00 39.22 N
ATOM 18 C4 C A 223 55.069 102.556 14.606 1.00 40.90 C
ATOM 19 N4 C A 223 54.284 101.485 14.480 1.00 43.32 N
ATOM 20 C5 C A 223 54.497 103.858 14.664 1.00 39.21 C
ATOM 21 C6 C A 223 55.335 104.892 14.772 1.00 40.42 C
ATOM 22 P A A 224 58.200 107.536 10.483 1.00 37.95 P
ATOM 23 OP1 A A 224 58.734 108.686 9.712 1.00 41.16 O
ATOM 24 OP2 A A 224 56.885 106.953 10.112 1.00 37.30 O
ATOM 25 O5' A A 224 59.317 106.404 10.582 1.00 33.39 O
TER
ATOM 1 O3' C B 223 58.068 107.989 12.010 1.00 39.75 O
ATOM 2 P A B 224 58.200 107.536 10.483 1.00 37.95 P
ATOM 3 OP1 A B 224 58.734 108.686 9.712 1.00 41.16 O
ATOM 4 OP2 A B 224 56.885 106.953 10.112 1.00 37.30 O
ATOM 5 O5' A B 224 59.317 106.404 10.582 1.00 33.39 O
ATOM 6 C5' A B 224 59.980 105.871 9.427 1.00 34.04 C
ATOM 7 C4' A B 224 61.460 105.732 9.710 1.00 35.08 C
ATOM 8 O4' A B 224 62.065 107.047 9.633 1.00 36.79 O
ATOM 9 C3' A B 224 61.820 105.182 11.091 1.00 34.39 C
ATOM 10 O3' A B 224 63.103 104.564 11.071 1.00 37.69 O
ATOM 11 C2' A B 224 61.985 106.465 11.899 1.00 35.20 C
ATOM 12 O2' A B 224 62.827 106.308 13.021 1.00 34.48 O
ATOM 13 C1' A B 224 62.663 107.364 10.870 1.00 35.24 C
ATOM 14 N9 A B 224 62.514 108.801 11.085 1.00 34.15 N
ATOM 15 C8 A B 224 61.399 109.579 10.889 1.00 33.57 C
ATOM 16 N7 A B 224 61.599 110.853 11.112 1.00 32.92 N
ATOM 17 C5 A B 224 62.932 110.919 11.491 1.00 31.53 C
ATOM 18 C6 A B 224 63.752 111.993 11.851 1.00 31.07 C
ATOM 19 N6 A B 224 63.330 113.255 11.886 1.00 31.97 N
ATOM 20 N1 A B 224 65.037 111.725 12.178 1.00 32.32 N
ATOM 21 C2 A B 224 65.455 110.451 12.145 1.00 33.72 C
ATOM 22 N3 A B 224 64.774 109.350 11.821 1.00 33.96 N
ATOM 23 C4 A B 224 63.504 109.660 11.496 1.00 33.20 C
ATOM 24 P G B 225 63.315 103.120 10.393 1.00 38.06 P
ATOM 25 OP1 G B 225 62.046 102.735 9.734 1.00 39.47 O
ATOM 26 OP2 G B 225 63.932 102.213 11.393 1.00 39.45 O
ATOM 27 O5' G B 225 64.421 103.425 9.286 1.00 39.44 O
TER
Atoms:
C2: (57.224,103.411,14.790)
OP1: (53.459,111.000,14.503)
OP2: (52.749,108.526,14.539)
C4: (55.069,102.556,14.606)
O5': (55.103,109.197,14.970)
C3': (57.455,107.119,12.953)
C1': (57.607,105.859,14.935)
O4': (56.832,107.016,15.210)
C5': (55.587,108.542,13.815)
P: (53.583,109.636,15.080)
O2: (58.452,103.261,14.866)
C4': (56.931,107.944,14.102)
C2': (58.390,106.143,13.651)
O2': (59.624,106.723,14.003)
N1: (56.691,104.705,14.832)
N3: (56.389,102.358,14.670)
N4: (54.284,101.485,14.480)
C6: (55.335,104.892,14.772)
C5: (54.497,103.858,14.664)
O3': (58.068,107.989,12.010)
OP1: (53.459,111.000,14.503)
OP2: (52.749,108.526,14.539)
C4: (55.069,102.556,14.606)
O5': (55.103,109.197,14.970)
C3': (57.455,107.119,12.953)
C1': (57.607,105.859,14.935)
O4': (56.832,107.016,15.210)
C5': (55.587,108.542,13.815)
P: (53.583,109.636,15.080)
O2: (58.452,103.261,14.866)
C4': (56.931,107.944,14.102)
C2': (58.390,106.143,13.651)
O2': (59.624,106.723,14.003)
N1: (56.691,104.705,14.832)
N3: (56.389,102.358,14.670)
N4: (54.284,101.485,14.480)
C6: (55.335,104.892,14.772)
C5: (54.497,103.858,14.664)
O3': (58.068,107.989,12.010)
OP1: (58.734,108.686,9.712)
OP2: (56.885,106.953,10.112)
C3': (61.820,105.182,11.091)
C1': (62.663,107.364,10.870)
C5': (59.980,105.871,9.427)
O4': (62.065,107.047,9.633)
C8: (61.399,109.579,10.889)
O2': (62.827,106.308,13.021)
C6: (63.752,111.993,11.851)
C5: (62.932,110.919,11.491)
C4: (63.504,109.660,11.496)
P: (58.200,107.536,10.483)
C4': (61.460,105.732,9.710)
C2': (61.985,106.465,11.899)
C2: (65.455,110.451,12.145)
N1: (65.037,111.725,12.178)
N3: (64.774,109.350,11.821)
N6: (63.330,113.255,11.886)
N7: (61.599,110.853,11.112)
N9: (62.514,108.801,11.085)
O5': (59.317,106.404,10.582)
O3': (63.103,104.564,11.071)
OP2: (56.885,106.953,10.112)
C3': (61.820,105.182,11.091)
C1': (62.663,107.364,10.870)
C5': (59.980,105.871,9.427)
O4': (62.065,107.047,9.633)
C8: (61.399,109.579,10.889)
O2': (62.827,106.308,13.021)
C6: (63.752,111.993,11.851)
C5: (62.932,110.919,11.491)
C4: (63.504,109.660,11.496)
P: (58.200,107.536,10.483)
C4': (61.460,105.732,9.710)
C2': (61.985,106.465,11.899)
C2: (65.455,110.451,12.145)
N1: (65.037,111.725,12.178)
N3: (64.774,109.350,11.821)
N6: (63.330,113.255,11.886)
N7: (61.599,110.853,11.112)
N9: (62.514,108.801,11.085)
O5': (59.317,106.404,10.582)
O3': (63.103,104.564,11.071)
Image (generated by PyMOL):