Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:0223:0224
Extra
PDB:
ATOM 1 O3' A A 222 53.522 110.393 16.683 1.00 49.92 O
ATOM 2 P C A 223 53.733 110.254 15.097 1.00 53.22 P
ATOM 3 OP1 C A 223 53.603 111.626 14.536 1.00 53.29 O
ATOM 4 OP2 C A 223 52.874 109.158 14.573 1.00 52.46 O
ATOM 5 O5' C A 223 55.252 109.798 14.984 1.00 52.43 O
ATOM 6 C5' C A 223 55.718 109.057 13.865 1.00 50.80 C
ATOM 7 C4' C A 223 57.072 108.480 14.165 1.00 50.81 C
ATOM 8 O4' C A 223 56.979 107.555 15.278 1.00 51.20 O
ATOM 9 C3' C A 223 57.634 107.653 13.031 1.00 51.08 C
ATOM 10 O3' C A 223 58.246 108.518 12.080 1.00 53.19 O
ATOM 11 C2' C A 223 58.588 106.706 13.751 1.00 48.68 C
ATOM 12 O2' C A 223 59.818 107.297 14.102 1.00 46.63 O
ATOM 13 C1' C A 223 57.809 106.425 15.037 1.00 48.50 C
ATOM 14 N1 C A 223 56.952 105.223 14.959 1.00 47.22 N
ATOM 15 C2 C A 223 57.551 103.950 14.970 1.00 46.58 C
ATOM 16 O2 C A 223 58.782 103.856 15.066 1.00 47.40 O
ATOM 17 N3 C A 223 56.768 102.855 14.875 1.00 46.57 N
ATOM 18 C4 C A 223 55.442 102.986 14.784 1.00 47.24 C
ATOM 19 N4 C A 223 54.713 101.874 14.684 1.00 48.76 N
ATOM 20 C5 C A 223 54.805 104.260 14.789 1.00 46.12 C
ATOM 21 C6 C A 223 55.590 105.340 14.873 1.00 47.58 C
ATOM 22 P A A 224 58.391 108.051 10.553 1.00 52.70 P
ATOM 23 OP1 A A 224 59.017 109.164 9.791 1.00 54.96 O
ATOM 24 OP2 A A 224 57.071 107.518 10.130 1.00 51.29 O
ATOM 25 O5' A A 224 59.437 106.860 10.658 1.00 50.09 O
TER
ATOM 1 O3' C B 223 58.246 108.518 12.080 1.00 53.19 O
ATOM 2 P A B 224 58.391 108.051 10.553 1.00 52.70 P
ATOM 3 OP1 A B 224 59.017 109.164 9.791 1.00 54.96 O
ATOM 4 OP2 A B 224 57.071 107.518 10.130 1.00 51.29 O
ATOM 5 O5' A B 224 59.437 106.860 10.658 1.00 50.09 O
ATOM 6 C5' A B 224 60.157 106.386 9.522 1.00 49.61 C
ATOM 7 C4' A B 224 61.623 106.322 9.851 1.00 50.72 C
ATOM 8 O4' A B 224 62.175 107.662 9.783 1.00 51.47 O
ATOM 9 C3' A B 224 61.950 105.795 11.248 1.00 50.67 C
ATOM 10 O3' A B 224 63.222 105.151 11.246 1.00 52.22 O
ATOM 11 C2' A B 224 62.069 107.089 12.048 1.00 51.20 C
ATOM 12 O2' A B 224 62.867 106.958 13.205 1.00 51.73 O
ATOM 13 C1' A B 224 62.751 107.993 11.025 1.00 50.54 C
ATOM 14 N9 A B 224 62.606 109.434 11.218 1.00 48.63 N
ATOM 15 C8 A B 224 61.496 110.225 11.033 1.00 47.68 C
ATOM 16 N7 A B 224 61.718 111.503 11.228 1.00 45.59 N
ATOM 17 C5 A B 224 63.061 111.555 11.577 1.00 45.73 C
ATOM 18 C6 A B 224 63.911 112.624 11.900 1.00 45.81 C
ATOM 19 N6 A B 224 63.517 113.899 11.918 1.00 45.18 N
ATOM 20 N1 A B 224 65.197 112.335 12.208 1.00 46.21 N
ATOM 21 C2 A B 224 65.589 111.053 12.191 1.00 46.70 C
ATOM 22 N3 A B 224 64.885 109.962 11.900 1.00 46.85 N
ATOM 23 C4 A B 224 63.614 110.287 11.595 1.00 46.94 C
ATOM 24 P G B 225 63.419 103.739 10.497 1.00 53.86 P
ATOM 25 OP1 G B 225 62.151 103.446 9.775 1.00 51.91 O
ATOM 26 OP2 G B 225 63.967 102.737 11.449 1.00 54.25 O
ATOM 27 O5' G B 225 64.562 104.073 9.435 1.00 54.88 O
TER
ATOM 2 P C A 223 53.733 110.254 15.097 1.00 53.22 P
ATOM 3 OP1 C A 223 53.603 111.626 14.536 1.00 53.29 O
ATOM 4 OP2 C A 223 52.874 109.158 14.573 1.00 52.46 O
ATOM 5 O5' C A 223 55.252 109.798 14.984 1.00 52.43 O
ATOM 6 C5' C A 223 55.718 109.057 13.865 1.00 50.80 C
ATOM 7 C4' C A 223 57.072 108.480 14.165 1.00 50.81 C
ATOM 8 O4' C A 223 56.979 107.555 15.278 1.00 51.20 O
ATOM 9 C3' C A 223 57.634 107.653 13.031 1.00 51.08 C
ATOM 10 O3' C A 223 58.246 108.518 12.080 1.00 53.19 O
ATOM 11 C2' C A 223 58.588 106.706 13.751 1.00 48.68 C
ATOM 12 O2' C A 223 59.818 107.297 14.102 1.00 46.63 O
ATOM 13 C1' C A 223 57.809 106.425 15.037 1.00 48.50 C
ATOM 14 N1 C A 223 56.952 105.223 14.959 1.00 47.22 N
ATOM 15 C2 C A 223 57.551 103.950 14.970 1.00 46.58 C
ATOM 16 O2 C A 223 58.782 103.856 15.066 1.00 47.40 O
ATOM 17 N3 C A 223 56.768 102.855 14.875 1.00 46.57 N
ATOM 18 C4 C A 223 55.442 102.986 14.784 1.00 47.24 C
ATOM 19 N4 C A 223 54.713 101.874 14.684 1.00 48.76 N
ATOM 20 C5 C A 223 54.805 104.260 14.789 1.00 46.12 C
ATOM 21 C6 C A 223 55.590 105.340 14.873 1.00 47.58 C
ATOM 22 P A A 224 58.391 108.051 10.553 1.00 52.70 P
ATOM 23 OP1 A A 224 59.017 109.164 9.791 1.00 54.96 O
ATOM 24 OP2 A A 224 57.071 107.518 10.130 1.00 51.29 O
ATOM 25 O5' A A 224 59.437 106.860 10.658 1.00 50.09 O
TER
ATOM 1 O3' C B 223 58.246 108.518 12.080 1.00 53.19 O
ATOM 2 P A B 224 58.391 108.051 10.553 1.00 52.70 P
ATOM 3 OP1 A B 224 59.017 109.164 9.791 1.00 54.96 O
ATOM 4 OP2 A B 224 57.071 107.518 10.130 1.00 51.29 O
ATOM 5 O5' A B 224 59.437 106.860 10.658 1.00 50.09 O
ATOM 6 C5' A B 224 60.157 106.386 9.522 1.00 49.61 C
ATOM 7 C4' A B 224 61.623 106.322 9.851 1.00 50.72 C
ATOM 8 O4' A B 224 62.175 107.662 9.783 1.00 51.47 O
ATOM 9 C3' A B 224 61.950 105.795 11.248 1.00 50.67 C
ATOM 10 O3' A B 224 63.222 105.151 11.246 1.00 52.22 O
ATOM 11 C2' A B 224 62.069 107.089 12.048 1.00 51.20 C
ATOM 12 O2' A B 224 62.867 106.958 13.205 1.00 51.73 O
ATOM 13 C1' A B 224 62.751 107.993 11.025 1.00 50.54 C
ATOM 14 N9 A B 224 62.606 109.434 11.218 1.00 48.63 N
ATOM 15 C8 A B 224 61.496 110.225 11.033 1.00 47.68 C
ATOM 16 N7 A B 224 61.718 111.503 11.228 1.00 45.59 N
ATOM 17 C5 A B 224 63.061 111.555 11.577 1.00 45.73 C
ATOM 18 C6 A B 224 63.911 112.624 11.900 1.00 45.81 C
ATOM 19 N6 A B 224 63.517 113.899 11.918 1.00 45.18 N
ATOM 20 N1 A B 224 65.197 112.335 12.208 1.00 46.21 N
ATOM 21 C2 A B 224 65.589 111.053 12.191 1.00 46.70 C
ATOM 22 N3 A B 224 64.885 109.962 11.900 1.00 46.85 N
ATOM 23 C4 A B 224 63.614 110.287 11.595 1.00 46.94 C
ATOM 24 P G B 225 63.419 103.739 10.497 1.00 53.86 P
ATOM 25 OP1 G B 225 62.151 103.446 9.775 1.00 51.91 O
ATOM 26 OP2 G B 225 63.967 102.737 11.449 1.00 54.25 O
ATOM 27 O5' G B 225 64.562 104.073 9.435 1.00 54.88 O
TER
Atoms:
C2: (57.551,103.950,14.970)
OP1: (53.603,111.626,14.536)
OP2: (52.874,109.158,14.573)
C4: (55.442,102.986,14.784)
O5': (55.252,109.798,14.984)
C3': (57.634,107.653,13.031)
C1': (57.809,106.425,15.037)
O4': (56.979,107.555,15.278)
C5': (55.718,109.057,13.865)
P: (53.733,110.254,15.097)
O2: (58.782,103.856,15.066)
C4': (57.072,108.480,14.165)
C2': (58.588,106.706,13.751)
O2': (59.818,107.297,14.102)
N1: (56.952,105.223,14.959)
N3: (56.768,102.855,14.875)
N4: (54.713,101.874,14.684)
C6: (55.590,105.340,14.873)
C5: (54.805,104.260,14.789)
O3': (58.246,108.518,12.080)
OP1: (53.603,111.626,14.536)
OP2: (52.874,109.158,14.573)
C4: (55.442,102.986,14.784)
O5': (55.252,109.798,14.984)
C3': (57.634,107.653,13.031)
C1': (57.809,106.425,15.037)
O4': (56.979,107.555,15.278)
C5': (55.718,109.057,13.865)
P: (53.733,110.254,15.097)
O2: (58.782,103.856,15.066)
C4': (57.072,108.480,14.165)
C2': (58.588,106.706,13.751)
O2': (59.818,107.297,14.102)
N1: (56.952,105.223,14.959)
N3: (56.768,102.855,14.875)
N4: (54.713,101.874,14.684)
C6: (55.590,105.340,14.873)
C5: (54.805,104.260,14.789)
O3': (58.246,108.518,12.080)
OP1: (59.017,109.164,9.791)
OP2: (57.071,107.518,10.130)
C3': (61.950,105.795,11.248)
C1': (62.751,107.993,11.025)
C5': (60.157,106.386,9.522)
O4': (62.175,107.662,9.783)
C8: (61.496,110.225,11.033)
O2': (62.867,106.958,13.205)
C6: (63.911,112.624,11.900)
C5: (63.061,111.555,11.577)
C4: (63.614,110.287,11.595)
P: (58.391,108.051,10.553)
C4': (61.623,106.322,9.851)
C2': (62.069,107.089,12.048)
C2: (65.589,111.053,12.191)
N1: (65.197,112.335,12.208)
N3: (64.885,109.962,11.900)
N6: (63.517,113.899,11.918)
N7: (61.718,111.503,11.228)
N9: (62.606,109.434,11.218)
O5': (59.437,106.860,10.658)
O3': (63.222,105.151,11.246)
OP2: (57.071,107.518,10.130)
C3': (61.950,105.795,11.248)
C1': (62.751,107.993,11.025)
C5': (60.157,106.386,9.522)
O4': (62.175,107.662,9.783)
C8: (61.496,110.225,11.033)
O2': (62.867,106.958,13.205)
C6: (63.911,112.624,11.900)
C5: (63.061,111.555,11.577)
C4: (63.614,110.287,11.595)
P: (58.391,108.051,10.553)
C4': (61.623,106.322,9.851)
C2': (62.069,107.089,12.048)
C2: (65.589,111.053,12.191)
N1: (65.197,112.335,12.208)
N3: (64.885,109.962,11.900)
N6: (63.517,113.899,11.918)
N7: (61.718,111.503,11.228)
N9: (62.606,109.434,11.218)
O5': (59.437,106.860,10.658)
O3': (63.222,105.151,11.246)
Image (generated by PyMOL):