Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0223:0224
Extra
PDB:
ATOM 1 O3' A A 222 53.571 110.396 16.772 1.00 43.33 O
ATOM 2 P C A 223 53.771 110.231 15.189 1.00 47.05 P
ATOM 3 OP1 C A 223 53.582 111.585 14.609 1.00 46.08 O
ATOM 4 OP2 C A 223 52.941 109.099 14.701 1.00 46.35 O
ATOM 5 O5' C A 223 55.302 109.807 15.069 1.00 46.47 O
ATOM 6 C5' C A 223 55.786 109.077 13.935 1.00 45.04 C
ATOM 7 C4' C A 223 57.120 108.455 14.255 1.00 44.05 C
ATOM 8 O4' C A 223 56.971 107.533 15.363 1.00 44.69 O
ATOM 9 C3' C A 223 57.690 107.604 13.140 1.00 44.16 C
ATOM 10 O3' C A 223 58.351 108.424 12.184 1.00 46.44 O
ATOM 11 C2' C A 223 58.609 106.648 13.890 1.00 42.05 C
ATOM 12 O2' C A 223 59.839 107.213 14.278 1.00 39.29 O
ATOM 13 C1' C A 223 57.792 106.391 15.154 1.00 42.99 C
ATOM 14 N1 C A 223 56.924 105.202 15.057 1.00 44.11 N
ATOM 15 C2 C A 223 57.515 103.927 14.961 1.00 45.30 C
ATOM 16 O2 C A 223 58.755 103.826 14.957 1.00 45.67 O
ATOM 17 N3 C A 223 56.716 102.840 14.875 1.00 45.51 N
ATOM 18 C4 C A 223 55.387 102.984 14.887 1.00 44.67 C
ATOM 19 N4 C A 223 54.643 101.885 14.807 1.00 46.66 N
ATOM 20 C5 C A 223 54.764 104.261 14.984 1.00 43.89 C
ATOM 21 C6 C A 223 55.560 105.330 15.063 1.00 44.65 C
ATOM 22 P A A 224 58.442 107.951 10.652 1.00 44.65 P
ATOM 23 OP1 A A 224 59.143 109.004 9.880 1.00 47.46 O
ATOM 24 OP2 A A 224 57.077 107.523 10.246 1.00 43.15 O
ATOM 25 O5' A A 224 59.395 106.686 10.724 1.00 42.64 O
TER
ATOM 1 O3' C B 223 58.351 108.424 12.184 1.00 46.44 O
ATOM 2 P A B 224 58.442 107.951 10.652 1.00 44.65 P
ATOM 3 OP1 A B 224 59.143 109.004 9.880 1.00 47.46 O
ATOM 4 OP2 A B 224 57.077 107.523 10.246 1.00 43.15 O
ATOM 5 O5' A B 224 59.395 106.686 10.724 1.00 42.64 O
ATOM 6 C5' A B 224 60.174 106.279 9.602 1.00 43.52 C
ATOM 7 C4' A B 224 61.625 106.233 9.987 1.00 44.28 C
ATOM 8 O4' A B 224 62.184 107.567 9.925 1.00 44.38 O
ATOM 9 C3' A B 224 61.902 105.714 11.393 1.00 45.28 C
ATOM 10 O3' A B 224 63.153 105.039 11.411 1.00 48.75 O
ATOM 11 C2' A B 224 62.025 107.014 12.187 1.00 45.49 C
ATOM 12 O2' A B 224 62.781 106.888 13.376 1.00 45.44 O
ATOM 13 C1' A B 224 62.741 107.901 11.172 1.00 43.72 C
ATOM 14 N9 A B 224 62.598 109.342 11.349 1.00 42.38 N
ATOM 15 C8 A B 224 61.481 110.124 11.177 1.00 41.36 C
ATOM 16 N7 A B 224 61.699 111.404 11.353 1.00 39.29 N
ATOM 17 C5 A B 224 63.046 111.467 11.675 1.00 40.26 C
ATOM 18 C6 A B 224 63.888 112.540 11.975 1.00 41.05 C
ATOM 19 N6 A B 224 63.481 113.811 12.001 1.00 42.66 N
ATOM 20 N1 A B 224 65.183 112.263 12.255 1.00 41.74 N
ATOM 21 C2 A B 224 65.586 110.986 12.239 1.00 41.31 C
ATOM 22 N3 A B 224 64.886 109.891 11.975 1.00 41.73 N
ATOM 23 C4 A B 224 63.608 110.204 11.693 1.00 41.53 C
ATOM 24 P G B 225 63.349 103.676 10.576 1.00 50.53 P
ATOM 25 OP1 G B 225 62.096 103.447 9.797 1.00 46.53 O
ATOM 26 OP2 G B 225 63.847 102.611 11.491 1.00 51.43 O
ATOM 27 O5' G B 225 64.543 104.058 9.588 1.00 49.67 O
TER
ATOM 2 P C A 223 53.771 110.231 15.189 1.00 47.05 P
ATOM 3 OP1 C A 223 53.582 111.585 14.609 1.00 46.08 O
ATOM 4 OP2 C A 223 52.941 109.099 14.701 1.00 46.35 O
ATOM 5 O5' C A 223 55.302 109.807 15.069 1.00 46.47 O
ATOM 6 C5' C A 223 55.786 109.077 13.935 1.00 45.04 C
ATOM 7 C4' C A 223 57.120 108.455 14.255 1.00 44.05 C
ATOM 8 O4' C A 223 56.971 107.533 15.363 1.00 44.69 O
ATOM 9 C3' C A 223 57.690 107.604 13.140 1.00 44.16 C
ATOM 10 O3' C A 223 58.351 108.424 12.184 1.00 46.44 O
ATOM 11 C2' C A 223 58.609 106.648 13.890 1.00 42.05 C
ATOM 12 O2' C A 223 59.839 107.213 14.278 1.00 39.29 O
ATOM 13 C1' C A 223 57.792 106.391 15.154 1.00 42.99 C
ATOM 14 N1 C A 223 56.924 105.202 15.057 1.00 44.11 N
ATOM 15 C2 C A 223 57.515 103.927 14.961 1.00 45.30 C
ATOM 16 O2 C A 223 58.755 103.826 14.957 1.00 45.67 O
ATOM 17 N3 C A 223 56.716 102.840 14.875 1.00 45.51 N
ATOM 18 C4 C A 223 55.387 102.984 14.887 1.00 44.67 C
ATOM 19 N4 C A 223 54.643 101.885 14.807 1.00 46.66 N
ATOM 20 C5 C A 223 54.764 104.261 14.984 1.00 43.89 C
ATOM 21 C6 C A 223 55.560 105.330 15.063 1.00 44.65 C
ATOM 22 P A A 224 58.442 107.951 10.652 1.00 44.65 P
ATOM 23 OP1 A A 224 59.143 109.004 9.880 1.00 47.46 O
ATOM 24 OP2 A A 224 57.077 107.523 10.246 1.00 43.15 O
ATOM 25 O5' A A 224 59.395 106.686 10.724 1.00 42.64 O
TER
ATOM 1 O3' C B 223 58.351 108.424 12.184 1.00 46.44 O
ATOM 2 P A B 224 58.442 107.951 10.652 1.00 44.65 P
ATOM 3 OP1 A B 224 59.143 109.004 9.880 1.00 47.46 O
ATOM 4 OP2 A B 224 57.077 107.523 10.246 1.00 43.15 O
ATOM 5 O5' A B 224 59.395 106.686 10.724 1.00 42.64 O
ATOM 6 C5' A B 224 60.174 106.279 9.602 1.00 43.52 C
ATOM 7 C4' A B 224 61.625 106.233 9.987 1.00 44.28 C
ATOM 8 O4' A B 224 62.184 107.567 9.925 1.00 44.38 O
ATOM 9 C3' A B 224 61.902 105.714 11.393 1.00 45.28 C
ATOM 10 O3' A B 224 63.153 105.039 11.411 1.00 48.75 O
ATOM 11 C2' A B 224 62.025 107.014 12.187 1.00 45.49 C
ATOM 12 O2' A B 224 62.781 106.888 13.376 1.00 45.44 O
ATOM 13 C1' A B 224 62.741 107.901 11.172 1.00 43.72 C
ATOM 14 N9 A B 224 62.598 109.342 11.349 1.00 42.38 N
ATOM 15 C8 A B 224 61.481 110.124 11.177 1.00 41.36 C
ATOM 16 N7 A B 224 61.699 111.404 11.353 1.00 39.29 N
ATOM 17 C5 A B 224 63.046 111.467 11.675 1.00 40.26 C
ATOM 18 C6 A B 224 63.888 112.540 11.975 1.00 41.05 C
ATOM 19 N6 A B 224 63.481 113.811 12.001 1.00 42.66 N
ATOM 20 N1 A B 224 65.183 112.263 12.255 1.00 41.74 N
ATOM 21 C2 A B 224 65.586 110.986 12.239 1.00 41.31 C
ATOM 22 N3 A B 224 64.886 109.891 11.975 1.00 41.73 N
ATOM 23 C4 A B 224 63.608 110.204 11.693 1.00 41.53 C
ATOM 24 P G B 225 63.349 103.676 10.576 1.00 50.53 P
ATOM 25 OP1 G B 225 62.096 103.447 9.797 1.00 46.53 O
ATOM 26 OP2 G B 225 63.847 102.611 11.491 1.00 51.43 O
ATOM 27 O5' G B 225 64.543 104.058 9.588 1.00 49.67 O
TER
Atoms:
C2: (57.515,103.927,14.961)
OP1: (53.582,111.585,14.609)
OP2: (52.941,109.099,14.701)
C4: (55.387,102.984,14.887)
O5': (55.302,109.807,15.069)
C3': (57.690,107.604,13.140)
C1': (57.792,106.391,15.154)
O4': (56.971,107.533,15.363)
C5': (55.786,109.077,13.935)
P: (53.771,110.231,15.189)
O2: (58.755,103.826,14.957)
C4': (57.120,108.455,14.255)
C2': (58.609,106.648,13.890)
O2': (59.839,107.213,14.278)
N1: (56.924,105.202,15.057)
N3: (56.716,102.840,14.875)
N4: (54.643,101.885,14.807)
C6: (55.560,105.330,15.063)
C5: (54.764,104.261,14.984)
O3': (58.351,108.424,12.184)
OP1: (53.582,111.585,14.609)
OP2: (52.941,109.099,14.701)
C4: (55.387,102.984,14.887)
O5': (55.302,109.807,15.069)
C3': (57.690,107.604,13.140)
C1': (57.792,106.391,15.154)
O4': (56.971,107.533,15.363)
C5': (55.786,109.077,13.935)
P: (53.771,110.231,15.189)
O2: (58.755,103.826,14.957)
C4': (57.120,108.455,14.255)
C2': (58.609,106.648,13.890)
O2': (59.839,107.213,14.278)
N1: (56.924,105.202,15.057)
N3: (56.716,102.840,14.875)
N4: (54.643,101.885,14.807)
C6: (55.560,105.330,15.063)
C5: (54.764,104.261,14.984)
O3': (58.351,108.424,12.184)
OP1: (59.143,109.004,9.880)
OP2: (57.077,107.523,10.246)
C3': (61.902,105.714,11.393)
C1': (62.741,107.901,11.172)
C5': (60.174,106.279,9.602)
O4': (62.184,107.567,9.925)
C8: (61.481,110.124,11.177)
O2': (62.781,106.888,13.376)
C6: (63.888,112.540,11.975)
C5: (63.046,111.467,11.675)
C4: (63.608,110.204,11.693)
P: (58.442,107.951,10.652)
C4': (61.625,106.233,9.987)
C2': (62.025,107.014,12.187)
C2: (65.586,110.986,12.239)
N1: (65.183,112.263,12.255)
N3: (64.886,109.891,11.975)
N6: (63.481,113.811,12.001)
N7: (61.699,111.404,11.353)
N9: (62.598,109.342,11.349)
O5': (59.395,106.686,10.724)
O3': (63.153,105.039,11.411)
OP2: (57.077,107.523,10.246)
C3': (61.902,105.714,11.393)
C1': (62.741,107.901,11.172)
C5': (60.174,106.279,9.602)
O4': (62.184,107.567,9.925)
C8: (61.481,110.124,11.177)
O2': (62.781,106.888,13.376)
C6: (63.888,112.540,11.975)
C5: (63.046,111.467,11.675)
C4: (63.608,110.204,11.693)
P: (58.442,107.951,10.652)
C4': (61.625,106.233,9.987)
C2': (62.025,107.014,12.187)
C2: (65.586,110.986,12.239)
N1: (65.183,112.263,12.255)
N3: (64.886,109.891,11.975)
N6: (63.481,113.811,12.001)
N7: (61.699,111.404,11.353)
N9: (62.598,109.342,11.349)
O5': (59.395,106.686,10.724)
O3': (63.153,105.039,11.411)
Image (generated by PyMOL):