Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:0223:0224
Extra
PDB:
ATOM 1 O3' A A 222 53.325 110.375 16.832 1.00 41.12 O
ATOM 2 P C A 223 53.477 110.272 15.240 1.00 44.10 P
ATOM 3 OP1 C A 223 53.240 111.640 14.710 1.00 44.42 O
ATOM 4 OP2 C A 223 52.667 109.135 14.730 1.00 45.16 O
ATOM 5 O5' C A 223 55.011 109.901 15.055 1.00 43.28 O
ATOM 6 C5' C A 223 55.455 109.179 13.914 1.00 41.88 C
ATOM 7 C4' C A 223 56.804 108.583 14.185 1.00 42.15 C
ATOM 8 O4' C A 223 56.715 107.679 15.313 1.00 43.37 O
ATOM 9 C3' C A 223 57.320 107.723 13.056 1.00 42.30 C
ATOM 10 O3' C A 223 57.915 108.542 12.066 1.00 42.16 O
ATOM 11 C2' C A 223 58.280 106.782 13.772 1.00 42.19 C
ATOM 12 O2' C A 223 59.529 107.356 14.084 1.00 41.49 O
ATOM 13 C1' C A 223 57.521 106.533 15.073 1.00 42.96 C
ATOM 14 N1 C A 223 56.638 105.357 14.993 1.00 44.12 N
ATOM 15 C2 C A 223 57.212 104.076 14.966 1.00 45.08 C
ATOM 16 O2 C A 223 58.448 103.963 15.017 1.00 44.33 O
ATOM 17 N3 C A 223 56.403 102.995 14.882 1.00 46.21 N
ATOM 18 C4 C A 223 55.076 103.156 14.828 1.00 46.52 C
ATOM 19 N4 C A 223 54.318 102.064 14.739 1.00 47.54 N
ATOM 20 C5 C A 223 54.469 104.445 14.860 1.00 45.44 C
ATOM 21 C6 C A 223 55.277 105.505 14.941 1.00 45.05 C
ATOM 22 P A A 224 58.122 107.976 10.583 1.00 41.16 P
ATOM 23 OP1 A A 224 58.059 109.144 9.667 1.00 42.15 O
ATOM 24 OP2 A A 224 57.199 106.828 10.380 1.00 41.22 O
ATOM 25 O5' A A 224 59.613 107.433 10.627 1.00 36.53 O
TER
ATOM 1 O3' C B 223 57.915 108.542 12.066 1.00 42.16 O
ATOM 2 P A B 224 58.122 107.976 10.583 1.00 41.16 P
ATOM 3 OP1 A B 224 58.059 109.144 9.667 1.00 42.15 O
ATOM 4 OP2 A B 224 57.199 106.828 10.380 1.00 41.22 O
ATOM 5 O5' A B 224 59.613 107.433 10.627 1.00 36.53 O
ATOM 6 C5' A B 224 60.094 106.498 9.667 1.00 37.31 C
ATOM 7 C4' A B 224 61.539 106.210 9.950 1.00 38.01 C
ATOM 8 O4' A B 224 62.274 107.454 9.868 1.00 39.72 O
ATOM 9 C3' A B 224 61.791 105.684 11.351 1.00 39.43 C
ATOM 10 O3' A B 224 63.014 104.960 11.363 1.00 42.34 O
ATOM 11 C2' A B 224 61.948 106.977 12.145 1.00 39.91 C
ATOM 12 O2' A B 224 62.652 106.829 13.363 1.00 39.48 O
ATOM 13 C1' A B 224 62.725 107.834 11.149 1.00 39.61 C
ATOM 14 N9 A B 224 62.509 109.273 11.277 1.00 39.86 N
ATOM 15 C8 A B 224 61.347 109.978 11.069 1.00 39.37 C
ATOM 16 N7 A B 224 61.476 111.270 11.238 1.00 37.99 N
ATOM 17 C5 A B 224 62.810 111.426 11.584 1.00 37.23 C
ATOM 18 C6 A B 224 63.571 112.553 11.890 1.00 36.86 C
ATOM 19 N6 A B 224 63.080 113.793 11.905 1.00 37.08 N
ATOM 20 N1 A B 224 64.874 112.367 12.187 1.00 37.62 N
ATOM 21 C2 A B 224 65.363 111.124 12.182 1.00 37.58 C
ATOM 22 N3 A B 224 64.746 109.984 11.917 1.00 38.23 N
ATOM 23 C4 A B 224 63.456 110.206 11.619 1.00 38.24 C
ATOM 24 P G B 225 63.190 103.646 10.453 1.00 43.65 P
ATOM 25 OP1 G B 225 61.959 103.480 9.629 1.00 41.17 O
ATOM 26 OP2 G B 225 63.653 102.519 11.318 1.00 44.04 O
ATOM 27 O5' G B 225 64.394 104.063 9.496 1.00 44.53 O
TER
ATOM 2 P C A 223 53.477 110.272 15.240 1.00 44.10 P
ATOM 3 OP1 C A 223 53.240 111.640 14.710 1.00 44.42 O
ATOM 4 OP2 C A 223 52.667 109.135 14.730 1.00 45.16 O
ATOM 5 O5' C A 223 55.011 109.901 15.055 1.00 43.28 O
ATOM 6 C5' C A 223 55.455 109.179 13.914 1.00 41.88 C
ATOM 7 C4' C A 223 56.804 108.583 14.185 1.00 42.15 C
ATOM 8 O4' C A 223 56.715 107.679 15.313 1.00 43.37 O
ATOM 9 C3' C A 223 57.320 107.723 13.056 1.00 42.30 C
ATOM 10 O3' C A 223 57.915 108.542 12.066 1.00 42.16 O
ATOM 11 C2' C A 223 58.280 106.782 13.772 1.00 42.19 C
ATOM 12 O2' C A 223 59.529 107.356 14.084 1.00 41.49 O
ATOM 13 C1' C A 223 57.521 106.533 15.073 1.00 42.96 C
ATOM 14 N1 C A 223 56.638 105.357 14.993 1.00 44.12 N
ATOM 15 C2 C A 223 57.212 104.076 14.966 1.00 45.08 C
ATOM 16 O2 C A 223 58.448 103.963 15.017 1.00 44.33 O
ATOM 17 N3 C A 223 56.403 102.995 14.882 1.00 46.21 N
ATOM 18 C4 C A 223 55.076 103.156 14.828 1.00 46.52 C
ATOM 19 N4 C A 223 54.318 102.064 14.739 1.00 47.54 N
ATOM 20 C5 C A 223 54.469 104.445 14.860 1.00 45.44 C
ATOM 21 C6 C A 223 55.277 105.505 14.941 1.00 45.05 C
ATOM 22 P A A 224 58.122 107.976 10.583 1.00 41.16 P
ATOM 23 OP1 A A 224 58.059 109.144 9.667 1.00 42.15 O
ATOM 24 OP2 A A 224 57.199 106.828 10.380 1.00 41.22 O
ATOM 25 O5' A A 224 59.613 107.433 10.627 1.00 36.53 O
TER
ATOM 1 O3' C B 223 57.915 108.542 12.066 1.00 42.16 O
ATOM 2 P A B 224 58.122 107.976 10.583 1.00 41.16 P
ATOM 3 OP1 A B 224 58.059 109.144 9.667 1.00 42.15 O
ATOM 4 OP2 A B 224 57.199 106.828 10.380 1.00 41.22 O
ATOM 5 O5' A B 224 59.613 107.433 10.627 1.00 36.53 O
ATOM 6 C5' A B 224 60.094 106.498 9.667 1.00 37.31 C
ATOM 7 C4' A B 224 61.539 106.210 9.950 1.00 38.01 C
ATOM 8 O4' A B 224 62.274 107.454 9.868 1.00 39.72 O
ATOM 9 C3' A B 224 61.791 105.684 11.351 1.00 39.43 C
ATOM 10 O3' A B 224 63.014 104.960 11.363 1.00 42.34 O
ATOM 11 C2' A B 224 61.948 106.977 12.145 1.00 39.91 C
ATOM 12 O2' A B 224 62.652 106.829 13.363 1.00 39.48 O
ATOM 13 C1' A B 224 62.725 107.834 11.149 1.00 39.61 C
ATOM 14 N9 A B 224 62.509 109.273 11.277 1.00 39.86 N
ATOM 15 C8 A B 224 61.347 109.978 11.069 1.00 39.37 C
ATOM 16 N7 A B 224 61.476 111.270 11.238 1.00 37.99 N
ATOM 17 C5 A B 224 62.810 111.426 11.584 1.00 37.23 C
ATOM 18 C6 A B 224 63.571 112.553 11.890 1.00 36.86 C
ATOM 19 N6 A B 224 63.080 113.793 11.905 1.00 37.08 N
ATOM 20 N1 A B 224 64.874 112.367 12.187 1.00 37.62 N
ATOM 21 C2 A B 224 65.363 111.124 12.182 1.00 37.58 C
ATOM 22 N3 A B 224 64.746 109.984 11.917 1.00 38.23 N
ATOM 23 C4 A B 224 63.456 110.206 11.619 1.00 38.24 C
ATOM 24 P G B 225 63.190 103.646 10.453 1.00 43.65 P
ATOM 25 OP1 G B 225 61.959 103.480 9.629 1.00 41.17 O
ATOM 26 OP2 G B 225 63.653 102.519 11.318 1.00 44.04 O
ATOM 27 O5' G B 225 64.394 104.063 9.496 1.00 44.53 O
TER
Atoms:
C2: (57.212,104.076,14.966)
OP1: (53.240,111.640,14.710)
OP2: (52.667,109.135,14.730)
C4: (55.076,103.156,14.828)
O5': (55.011,109.901,15.055)
C3': (57.320,107.723,13.056)
C1': (57.521,106.533,15.073)
O4': (56.715,107.679,15.313)
C5': (55.455,109.179,13.914)
P: (53.477,110.272,15.240)
O2: (58.448,103.963,15.017)
C4': (56.804,108.583,14.185)
C2': (58.280,106.782,13.772)
O2': (59.529,107.356,14.084)
N1: (56.638,105.357,14.993)
N3: (56.403,102.995,14.882)
N4: (54.318,102.064,14.739)
C6: (55.277,105.505,14.941)
C5: (54.469,104.445,14.860)
O3': (57.915,108.542,12.066)
OP1: (53.240,111.640,14.710)
OP2: (52.667,109.135,14.730)
C4: (55.076,103.156,14.828)
O5': (55.011,109.901,15.055)
C3': (57.320,107.723,13.056)
C1': (57.521,106.533,15.073)
O4': (56.715,107.679,15.313)
C5': (55.455,109.179,13.914)
P: (53.477,110.272,15.240)
O2: (58.448,103.963,15.017)
C4': (56.804,108.583,14.185)
C2': (58.280,106.782,13.772)
O2': (59.529,107.356,14.084)
N1: (56.638,105.357,14.993)
N3: (56.403,102.995,14.882)
N4: (54.318,102.064,14.739)
C6: (55.277,105.505,14.941)
C5: (54.469,104.445,14.860)
O3': (57.915,108.542,12.066)
OP1: (58.059,109.144,9.667)
OP2: (57.199,106.828,10.380)
C3': (61.791,105.684,11.351)
C1': (62.725,107.834,11.149)
C5': (60.094,106.498,9.667)
O4': (62.274,107.454,9.868)
C8: (61.347,109.978,11.069)
O2': (62.652,106.829,13.363)
C6: (63.571,112.553,11.890)
C5: (62.810,111.426,11.584)
C4: (63.456,110.206,11.619)
P: (58.122,107.976,10.583)
C4': (61.539,106.210,9.950)
C2': (61.948,106.977,12.145)
C2: (65.363,111.124,12.182)
N1: (64.874,112.367,12.187)
N3: (64.746,109.984,11.917)
N6: (63.080,113.793,11.905)
N7: (61.476,111.270,11.238)
N9: (62.509,109.273,11.277)
O5': (59.613,107.433,10.627)
O3': (63.014,104.960,11.363)
OP2: (57.199,106.828,10.380)
C3': (61.791,105.684,11.351)
C1': (62.725,107.834,11.149)
C5': (60.094,106.498,9.667)
O4': (62.274,107.454,9.868)
C8: (61.347,109.978,11.069)
O2': (62.652,106.829,13.363)
C6: (63.571,112.553,11.890)
C5: (62.810,111.426,11.584)
C4: (63.456,110.206,11.619)
P: (58.122,107.976,10.583)
C4': (61.539,106.210,9.950)
C2': (61.948,106.977,12.145)
C2: (65.363,111.124,12.182)
N1: (64.874,112.367,12.187)
N3: (64.746,109.984,11.917)
N6: (63.080,113.793,11.905)
N7: (61.476,111.270,11.238)
N9: (62.509,109.273,11.277)
O5': (59.613,107.433,10.627)
O3': (63.014,104.960,11.363)
Image (generated by PyMOL):