Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J03:A2234:A2235
Extra
PDB:
ATOM 1 O3' C A2233 -125.505 -61.799 40.111 1.00 21.65 O
ATOM 2 P U A2234 -124.502 -62.991 39.696 1.00 6.58 P
ATOM 3 OP1 U A2234 -124.044 -62.738 38.311 1.00 59.82 O
ATOM 4 OP2 U A2234 -125.157 -64.284 40.019 1.00 59.82 O
ATOM 5 O5' U A2234 -123.245 -62.791 40.656 1.00 12.46 O
ATOM 6 C5' U A2234 -122.385 -61.639 40.514 1.00 12.46 C
ATOM 7 C4' U A2234 -121.371 -61.588 41.636 1.00 12.46 C
ATOM 8 O4' U A2234 -122.068 -61.496 42.906 1.00 12.46 O
ATOM 9 C3' U A2234 -120.464 -62.799 41.775 1.00 12.46 C
ATOM 10 O3' U A2234 -119.314 -62.695 40.937 1.00 12.46 O
ATOM 11 C2' U A2234 -120.076 -62.756 43.245 1.00 12.46 C
ATOM 12 O2' U A2234 -118.990 -61.882 43.468 1.00 12.46 O
ATOM 13 C1' U A2234 -121.345 -62.197 43.901 1.00 12.46 C
ATOM 14 N1 U A2234 -122.220 -63.233 44.475 1.00 56.43 N
ATOM 15 C2 U A2234 -122.075 -63.548 45.824 1.00 56.43 C
ATOM 16 O2 U A2234 -121.263 -63.009 46.558 1.00 56.43 O
ATOM 17 N3 U A2234 -122.918 -64.524 46.283 1.00 56.43 N
ATOM 18 C4 U A2234 -123.868 -65.208 45.556 1.00 56.43 C
ATOM 19 O4 U A2234 -124.541 -66.086 46.108 1.00 56.43 O
ATOM 20 C5 U A2234 -123.955 -64.826 44.181 1.00 56.43 C
ATOM 21 C6 U A2234 -123.151 -63.877 43.702 1.00 56.43 C
ATOM 22 P G A2235 -118.456 -64.017 40.571 1.00 27.66 P
ATOM 23 OP1 G A2235 -117.557 -63.682 39.436 1.00 52.85 O
ATOM 24 OP2 G A2235 -119.393 -65.164 40.444 1.00 52.85 O
ATOM 25 O5' G A2235 -117.536 -64.240 41.853 1.00 20.43 O
TER
ATOM 1 O3' U B2234 -119.314 -62.695 40.937 1.00 12.46 O
ATOM 2 P G B2235 -118.456 -64.017 40.571 1.00 27.66 P
ATOM 3 OP1 G B2235 -117.557 -63.682 39.436 1.00 52.85 O
ATOM 4 OP2 G B2235 -119.393 -65.164 40.444 1.00 52.85 O
ATOM 5 O5' G B2235 -117.536 -64.240 41.853 1.00 20.43 O
ATOM 6 C5' G B2235 -117.355 -65.555 42.408 1.00 20.43 C
ATOM 7 C4' G B2235 -116.136 -65.593 43.298 1.00 20.43 C
ATOM 8 O4' G B2235 -114.950 -65.329 42.504 1.00 20.43 O
ATOM 9 C3' G B2235 -116.067 -64.571 44.424 1.00 20.43 C
ATOM 10 O3' G B2235 -116.784 -64.965 45.581 1.00 20.43 O
ATOM 11 C2' G B2235 -114.573 -64.510 44.702 1.00 20.43 C
ATOM 12 O2' G B2235 -114.140 -65.609 45.484 1.00 20.43 O
ATOM 13 C1' G B2235 -113.994 -64.635 43.292 1.00 20.43 C
ATOM 14 N9 G B2235 -113.758 -63.318 42.699 1.00 30.20 N
ATOM 15 C8 G B2235 -114.473 -62.707 41.695 1.00 30.20 C
ATOM 16 N7 G B2235 -114.037 -61.510 41.410 1.00 30.20 N
ATOM 17 C5 G B2235 -112.967 -61.320 42.269 1.00 30.20 C
ATOM 18 C6 G B2235 -112.113 -60.207 42.432 1.00 30.20 C
ATOM 19 O6 G B2235 -112.122 -59.143 41.822 1.00 30.20 O
ATOM 20 N1 G B2235 -111.169 -60.424 43.427 1.00 30.20 N
ATOM 21 C2 G B2235 -111.052 -61.575 44.162 1.00 30.20 C
ATOM 22 N2 G B2235 -110.061 -61.602 45.055 1.00 30.20 N
ATOM 23 N3 G B2235 -111.845 -62.624 44.025 1.00 30.20 N
ATOM 24 C4 G B2235 -112.775 -62.428 43.066 1.00 30.20 C
ATOM 25 P C B2236 -117.385 -63.840 46.559 1.00 36.79 P
ATOM 26 OP1 C B2236 -118.130 -64.531 47.648 1.00 54.50 O
ATOM 27 OP2 C B2236 -118.073 -62.830 45.728 1.00 54.50 O
ATOM 28 O5' C B2236 -116.106 -63.139 47.192 1.00 15.32 O
TER
ATOM 2 P U A2234 -124.502 -62.991 39.696 1.00 6.58 P
ATOM 3 OP1 U A2234 -124.044 -62.738 38.311 1.00 59.82 O
ATOM 4 OP2 U A2234 -125.157 -64.284 40.019 1.00 59.82 O
ATOM 5 O5' U A2234 -123.245 -62.791 40.656 1.00 12.46 O
ATOM 6 C5' U A2234 -122.385 -61.639 40.514 1.00 12.46 C
ATOM 7 C4' U A2234 -121.371 -61.588 41.636 1.00 12.46 C
ATOM 8 O4' U A2234 -122.068 -61.496 42.906 1.00 12.46 O
ATOM 9 C3' U A2234 -120.464 -62.799 41.775 1.00 12.46 C
ATOM 10 O3' U A2234 -119.314 -62.695 40.937 1.00 12.46 O
ATOM 11 C2' U A2234 -120.076 -62.756 43.245 1.00 12.46 C
ATOM 12 O2' U A2234 -118.990 -61.882 43.468 1.00 12.46 O
ATOM 13 C1' U A2234 -121.345 -62.197 43.901 1.00 12.46 C
ATOM 14 N1 U A2234 -122.220 -63.233 44.475 1.00 56.43 N
ATOM 15 C2 U A2234 -122.075 -63.548 45.824 1.00 56.43 C
ATOM 16 O2 U A2234 -121.263 -63.009 46.558 1.00 56.43 O
ATOM 17 N3 U A2234 -122.918 -64.524 46.283 1.00 56.43 N
ATOM 18 C4 U A2234 -123.868 -65.208 45.556 1.00 56.43 C
ATOM 19 O4 U A2234 -124.541 -66.086 46.108 1.00 56.43 O
ATOM 20 C5 U A2234 -123.955 -64.826 44.181 1.00 56.43 C
ATOM 21 C6 U A2234 -123.151 -63.877 43.702 1.00 56.43 C
ATOM 22 P G A2235 -118.456 -64.017 40.571 1.00 27.66 P
ATOM 23 OP1 G A2235 -117.557 -63.682 39.436 1.00 52.85 O
ATOM 24 OP2 G A2235 -119.393 -65.164 40.444 1.00 52.85 O
ATOM 25 O5' G A2235 -117.536 -64.240 41.853 1.00 20.43 O
TER
ATOM 1 O3' U B2234 -119.314 -62.695 40.937 1.00 12.46 O
ATOM 2 P G B2235 -118.456 -64.017 40.571 1.00 27.66 P
ATOM 3 OP1 G B2235 -117.557 -63.682 39.436 1.00 52.85 O
ATOM 4 OP2 G B2235 -119.393 -65.164 40.444 1.00 52.85 O
ATOM 5 O5' G B2235 -117.536 -64.240 41.853 1.00 20.43 O
ATOM 6 C5' G B2235 -117.355 -65.555 42.408 1.00 20.43 C
ATOM 7 C4' G B2235 -116.136 -65.593 43.298 1.00 20.43 C
ATOM 8 O4' G B2235 -114.950 -65.329 42.504 1.00 20.43 O
ATOM 9 C3' G B2235 -116.067 -64.571 44.424 1.00 20.43 C
ATOM 10 O3' G B2235 -116.784 -64.965 45.581 1.00 20.43 O
ATOM 11 C2' G B2235 -114.573 -64.510 44.702 1.00 20.43 C
ATOM 12 O2' G B2235 -114.140 -65.609 45.484 1.00 20.43 O
ATOM 13 C1' G B2235 -113.994 -64.635 43.292 1.00 20.43 C
ATOM 14 N9 G B2235 -113.758 -63.318 42.699 1.00 30.20 N
ATOM 15 C8 G B2235 -114.473 -62.707 41.695 1.00 30.20 C
ATOM 16 N7 G B2235 -114.037 -61.510 41.410 1.00 30.20 N
ATOM 17 C5 G B2235 -112.967 -61.320 42.269 1.00 30.20 C
ATOM 18 C6 G B2235 -112.113 -60.207 42.432 1.00 30.20 C
ATOM 19 O6 G B2235 -112.122 -59.143 41.822 1.00 30.20 O
ATOM 20 N1 G B2235 -111.169 -60.424 43.427 1.00 30.20 N
ATOM 21 C2 G B2235 -111.052 -61.575 44.162 1.00 30.20 C
ATOM 22 N2 G B2235 -110.061 -61.602 45.055 1.00 30.20 N
ATOM 23 N3 G B2235 -111.845 -62.624 44.025 1.00 30.20 N
ATOM 24 C4 G B2235 -112.775 -62.428 43.066 1.00 30.20 C
ATOM 25 P C B2236 -117.385 -63.840 46.559 1.00 36.79 P
ATOM 26 OP1 C B2236 -118.130 -64.531 47.648 1.00 54.50 O
ATOM 27 OP2 C B2236 -118.073 -62.830 45.728 1.00 54.50 O
ATOM 28 O5' C B2236 -116.106 -63.139 47.192 1.00 15.32 O
TER
Atoms:
C4: (-123.868,-65.208,45.556)
N3: (-122.918,-64.524,46.283)
OP1: (-124.044,-62.738,38.311)
OP2: (-125.157,-64.284,40.019)
C2: (-122.075,-63.548,45.824)
C1': (-121.345,-62.197,43.901)
C3': (-120.464,-62.799,41.775)
O5': (-123.245,-62.791,40.656)
O4': (-122.068,-61.496,42.906)
C5': (-122.385,-61.639,40.514)
P: (-124.502,-62.991,39.696)
C4': (-121.371,-61.588,41.636)
C2': (-120.076,-62.756,43.245)
O2': (-118.990,-61.882,43.468)
N1: (-122.220,-63.233,44.475)
O4: (-124.541,-66.086,46.108)
O2: (-121.263,-63.009,46.558)
C6: (-123.151,-63.877,43.702)
C5: (-123.955,-64.826,44.181)
O3': (-119.314,-62.695,40.937)
N3: (-122.918,-64.524,46.283)
OP1: (-124.044,-62.738,38.311)
OP2: (-125.157,-64.284,40.019)
C2: (-122.075,-63.548,45.824)
C1': (-121.345,-62.197,43.901)
C3': (-120.464,-62.799,41.775)
O5': (-123.245,-62.791,40.656)
O4': (-122.068,-61.496,42.906)
C5': (-122.385,-61.639,40.514)
P: (-124.502,-62.991,39.696)
C4': (-121.371,-61.588,41.636)
C2': (-120.076,-62.756,43.245)
O2': (-118.990,-61.882,43.468)
N1: (-122.220,-63.233,44.475)
O4: (-124.541,-66.086,46.108)
O2: (-121.263,-63.009,46.558)
C6: (-123.151,-63.877,43.702)
C5: (-123.955,-64.826,44.181)
O3': (-119.314,-62.695,40.937)
OP1: (-117.557,-63.682,39.436)
OP2: (-119.393,-65.164,40.444)
C3': (-116.067,-64.571,44.424)
C1': (-113.994,-64.635,43.292)
C5': (-117.355,-65.555,42.408)
O6: (-112.122,-59.143,41.822)
O4': (-114.950,-65.329,42.504)
C8: (-114.473,-62.707,41.695)
C2: (-111.052,-61.575,44.162)
C6: (-112.113,-60.207,42.432)
C5: (-112.967,-61.320,42.269)
C4: (-112.775,-62.428,43.066)
P: (-118.456,-64.017,40.571)
C4': (-116.136,-65.593,43.298)
C2': (-114.573,-64.510,44.702)
O2': (-114.140,-65.609,45.484)
N1: (-111.169,-60.424,43.427)
N2: (-110.061,-61.602,45.055)
N3: (-111.845,-62.624,44.025)
N7: (-114.037,-61.510,41.410)
N9: (-113.758,-63.318,42.699)
O5': (-117.536,-64.240,41.853)
O3': (-116.784,-64.965,45.581)
OP2: (-119.393,-65.164,40.444)
C3': (-116.067,-64.571,44.424)
C1': (-113.994,-64.635,43.292)
C5': (-117.355,-65.555,42.408)
O6: (-112.122,-59.143,41.822)
O4': (-114.950,-65.329,42.504)
C8: (-114.473,-62.707,41.695)
C2: (-111.052,-61.575,44.162)
C6: (-112.113,-60.207,42.432)
C5: (-112.967,-61.320,42.269)
C4: (-112.775,-62.428,43.066)
P: (-118.456,-64.017,40.571)
C4': (-116.136,-65.593,43.298)
C2': (-114.573,-64.510,44.702)
O2': (-114.140,-65.609,45.484)
N1: (-111.169,-60.424,43.427)
N2: (-110.061,-61.602,45.055)
N3: (-111.845,-62.624,44.025)
N7: (-114.037,-61.510,41.410)
N9: (-113.758,-63.318,42.699)
O5': (-117.536,-64.240,41.853)
O3': (-116.784,-64.965,45.581)
Image (generated by PyMOL):