Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A678:A719
Extra
PDB:
ATOM 1 O3' G A 677 52.270 71.114 48.182 1.00 56.11 O
ATOM 2 P G A 678 53.552 71.804 48.868 1.00 54.16 P
ATOM 3 OP1 G A 678 53.139 71.954 50.288 1.00 53.43 O
ATOM 4 OP2 G A 678 53.943 73.000 48.090 1.00 53.68 O
ATOM 5 O5' G A 678 54.717 70.722 48.739 1.00 52.81 O
ATOM 6 C5' G A 678 54.518 69.373 49.185 1.00 51.70 C
ATOM 7 C4' G A 678 55.646 68.481 48.712 1.00 51.44 C
ATOM 8 O4' G A 678 55.495 68.199 47.299 1.00 51.71 O
ATOM 9 C3' G A 678 57.058 69.033 48.809 1.00 52.31 C
ATOM 10 O3' G A 678 57.639 68.952 50.107 1.00 54.19 O
ATOM 11 C2' G A 678 57.822 68.152 47.837 1.00 51.38 C
ATOM 12 O2' G A 678 58.206 66.941 48.452 1.00 50.82 O
ATOM 13 C1' G A 678 56.772 67.913 46.746 1.00 50.94 C
ATOM 14 N9 G A 678 56.980 68.716 45.539 1.00 50.85 N
ATOM 15 C8 G A 678 56.377 69.905 45.204 1.00 50.24 C
ATOM 16 N7 G A 678 56.807 70.396 44.074 1.00 50.91 N
ATOM 17 C5 G A 678 57.747 69.474 43.632 1.00 50.51 C
ATOM 18 C6 G A 678 58.555 69.463 42.464 1.00 51.25 C
ATOM 19 O6 G A 678 58.620 70.306 41.557 1.00 52.95 O
ATOM 20 N1 G A 678 59.352 68.327 42.410 1.00 51.39 N
ATOM 21 C2 G A 678 59.378 67.333 43.348 1.00 51.38 C
ATOM 22 N2 G A 678 60.230 66.321 43.124 1.00 52.22 N
ATOM 23 N3 G A 678 58.634 67.329 44.428 1.00 51.79 N
ATOM 24 C4 G A 678 57.852 68.424 44.512 1.00 50.54 C
ATOM 25 P G A 679 58.771 70.025 50.527 1.00 55.05 P
ATOM 26 OP1 G A 679 59.281 69.774 51.903 1.00 54.14 O
ATOM 27 OP2 G A 679 58.200 71.349 50.187 1.00 55.01 O
ATOM 28 O5' G A 679 59.979 69.701 49.547 1.00 54.71 O
TER
ATOM 1 O3' U B 718 59.387 63.549 44.379 1.00 55.68 O
ATOM 2 P C B 719 60.764 62.859 44.826 1.00 57.43 P
ATOM 3 OP1 C B 719 61.777 63.258 43.833 1.00 58.22 O
ATOM 4 OP2 C B 719 60.460 61.424 45.029 1.00 58.52 O
ATOM 5 O5' C B 719 61.148 63.537 46.220 1.00 57.49 O
ATOM 6 C5' C B 719 61.611 64.910 46.293 1.00 56.22 C
ATOM 7 C4' C B 719 62.026 65.237 47.712 1.00 54.94 C
ATOM 8 O4' C B 719 60.868 65.231 48.592 1.00 53.27 O
ATOM 9 C3' C B 719 62.945 64.190 48.316 1.00 55.05 C
ATOM 10 O3' C B 719 64.280 64.404 47.911 1.00 57.05 O
ATOM 11 C2' C B 719 62.723 64.350 49.810 1.00 53.54 C
ATOM 12 O2' C B 719 63.466 65.415 50.365 1.00 53.49 O
ATOM 13 C1' C B 719 61.225 64.668 49.848 1.00 53.16 C
ATOM 14 N1 C B 719 60.371 63.487 50.104 1.00 51.64 N
ATOM 15 C2 C B 719 59.928 63.244 51.414 1.00 50.73 C
ATOM 16 O2 C B 719 60.245 64.030 52.316 1.00 49.63 O
ATOM 17 N3 C B 719 59.172 62.156 51.664 1.00 50.14 N
ATOM 18 C4 C B 719 58.856 61.321 50.672 1.00 51.34 C
ATOM 19 N4 C B 719 58.127 60.234 50.968 1.00 52.94 N
ATOM 20 C5 C B 719 59.276 61.550 49.330 1.00 51.91 C
ATOM 21 C6 C B 719 60.024 62.635 49.093 1.00 51.85 C
ATOM 22 P U B 720 65.303 63.175 47.902 1.00 59.57 P
ATOM 23 OP1 U B 720 66.626 63.671 47.447 1.00 60.16 O
ATOM 24 OP2 U B 720 64.655 62.044 47.187 1.00 59.45 O
ATOM 25 O5' U B 720 65.455 62.817 49.441 1.00 61.89 O
TER
ATOM 2 P G A 678 53.552 71.804 48.868 1.00 54.16 P
ATOM 3 OP1 G A 678 53.139 71.954 50.288 1.00 53.43 O
ATOM 4 OP2 G A 678 53.943 73.000 48.090 1.00 53.68 O
ATOM 5 O5' G A 678 54.717 70.722 48.739 1.00 52.81 O
ATOM 6 C5' G A 678 54.518 69.373 49.185 1.00 51.70 C
ATOM 7 C4' G A 678 55.646 68.481 48.712 1.00 51.44 C
ATOM 8 O4' G A 678 55.495 68.199 47.299 1.00 51.71 O
ATOM 9 C3' G A 678 57.058 69.033 48.809 1.00 52.31 C
ATOM 10 O3' G A 678 57.639 68.952 50.107 1.00 54.19 O
ATOM 11 C2' G A 678 57.822 68.152 47.837 1.00 51.38 C
ATOM 12 O2' G A 678 58.206 66.941 48.452 1.00 50.82 O
ATOM 13 C1' G A 678 56.772 67.913 46.746 1.00 50.94 C
ATOM 14 N9 G A 678 56.980 68.716 45.539 1.00 50.85 N
ATOM 15 C8 G A 678 56.377 69.905 45.204 1.00 50.24 C
ATOM 16 N7 G A 678 56.807 70.396 44.074 1.00 50.91 N
ATOM 17 C5 G A 678 57.747 69.474 43.632 1.00 50.51 C
ATOM 18 C6 G A 678 58.555 69.463 42.464 1.00 51.25 C
ATOM 19 O6 G A 678 58.620 70.306 41.557 1.00 52.95 O
ATOM 20 N1 G A 678 59.352 68.327 42.410 1.00 51.39 N
ATOM 21 C2 G A 678 59.378 67.333 43.348 1.00 51.38 C
ATOM 22 N2 G A 678 60.230 66.321 43.124 1.00 52.22 N
ATOM 23 N3 G A 678 58.634 67.329 44.428 1.00 51.79 N
ATOM 24 C4 G A 678 57.852 68.424 44.512 1.00 50.54 C
ATOM 25 P G A 679 58.771 70.025 50.527 1.00 55.05 P
ATOM 26 OP1 G A 679 59.281 69.774 51.903 1.00 54.14 O
ATOM 27 OP2 G A 679 58.200 71.349 50.187 1.00 55.01 O
ATOM 28 O5' G A 679 59.979 69.701 49.547 1.00 54.71 O
TER
ATOM 1 O3' U B 718 59.387 63.549 44.379 1.00 55.68 O
ATOM 2 P C B 719 60.764 62.859 44.826 1.00 57.43 P
ATOM 3 OP1 C B 719 61.777 63.258 43.833 1.00 58.22 O
ATOM 4 OP2 C B 719 60.460 61.424 45.029 1.00 58.52 O
ATOM 5 O5' C B 719 61.148 63.537 46.220 1.00 57.49 O
ATOM 6 C5' C B 719 61.611 64.910 46.293 1.00 56.22 C
ATOM 7 C4' C B 719 62.026 65.237 47.712 1.00 54.94 C
ATOM 8 O4' C B 719 60.868 65.231 48.592 1.00 53.27 O
ATOM 9 C3' C B 719 62.945 64.190 48.316 1.00 55.05 C
ATOM 10 O3' C B 719 64.280 64.404 47.911 1.00 57.05 O
ATOM 11 C2' C B 719 62.723 64.350 49.810 1.00 53.54 C
ATOM 12 O2' C B 719 63.466 65.415 50.365 1.00 53.49 O
ATOM 13 C1' C B 719 61.225 64.668 49.848 1.00 53.16 C
ATOM 14 N1 C B 719 60.371 63.487 50.104 1.00 51.64 N
ATOM 15 C2 C B 719 59.928 63.244 51.414 1.00 50.73 C
ATOM 16 O2 C B 719 60.245 64.030 52.316 1.00 49.63 O
ATOM 17 N3 C B 719 59.172 62.156 51.664 1.00 50.14 N
ATOM 18 C4 C B 719 58.856 61.321 50.672 1.00 51.34 C
ATOM 19 N4 C B 719 58.127 60.234 50.968 1.00 52.94 N
ATOM 20 C5 C B 719 59.276 61.550 49.330 1.00 51.91 C
ATOM 21 C6 C B 719 60.024 62.635 49.093 1.00 51.85 C
ATOM 22 P U B 720 65.303 63.175 47.902 1.00 59.57 P
ATOM 23 OP1 U B 720 66.626 63.671 47.447 1.00 60.16 O
ATOM 24 OP2 U B 720 64.655 62.044 47.187 1.00 59.45 O
ATOM 25 O5' U B 720 65.455 62.817 49.441 1.00 61.89 O
TER
Atoms:
OP1: (53.139,71.954,50.288)
OP2: (53.943,73.000,48.090)
C3': (57.058,69.033,48.809)
C1': (56.772,67.913,46.746)
C5': (54.518,69.373,49.185)
O6: (58.620,70.306,41.557)
O4': (55.495,68.199,47.299)
C8: (56.377,69.905,45.204)
C2: (59.378,67.333,43.348)
C6: (58.555,69.463,42.464)
C5: (57.747,69.474,43.632)
C4: (57.852,68.424,44.512)
P: (53.552,71.804,48.868)
C4': (55.646,68.481,48.712)
C2': (57.822,68.152,47.837)
O2': (58.206,66.941,48.452)
N1: (59.352,68.327,42.410)
N2: (60.230,66.321,43.124)
N3: (58.634,67.329,44.428)
N7: (56.807,70.396,44.074)
N9: (56.980,68.716,45.539)
O5': (54.717,70.722,48.739)
O3': (57.639,68.952,50.107)
OP2: (53.943,73.000,48.090)
C3': (57.058,69.033,48.809)
C1': (56.772,67.913,46.746)
C5': (54.518,69.373,49.185)
O6: (58.620,70.306,41.557)
O4': (55.495,68.199,47.299)
C8: (56.377,69.905,45.204)
C2: (59.378,67.333,43.348)
C6: (58.555,69.463,42.464)
C5: (57.747,69.474,43.632)
C4: (57.852,68.424,44.512)
P: (53.552,71.804,48.868)
C4': (55.646,68.481,48.712)
C2': (57.822,68.152,47.837)
O2': (58.206,66.941,48.452)
N1: (59.352,68.327,42.410)
N2: (60.230,66.321,43.124)
N3: (58.634,67.329,44.428)
N7: (56.807,70.396,44.074)
N9: (56.980,68.716,45.539)
O5': (54.717,70.722,48.739)
O3': (57.639,68.952,50.107)
C2: (59.928,63.244,51.414)
OP1: (61.777,63.258,43.833)
OP2: (60.460,61.424,45.029)
C4: (58.856,61.321,50.672)
O5': (61.148,63.537,46.220)
C3': (62.945,64.190,48.316)
C1': (61.225,64.668,49.848)
O4': (60.868,65.231,48.592)
C5': (61.611,64.910,46.293)
P: (60.764,62.859,44.826)
O2: (60.245,64.030,52.316)
C4': (62.026,65.237,47.712)
C2': (62.723,64.350,49.810)
O2': (63.466,65.415,50.365)
N1: (60.371,63.487,50.104)
N3: (59.172,62.156,51.664)
N4: (58.127,60.234,50.968)
C6: (60.024,62.635,49.093)
C5: (59.276,61.550,49.330)
O3': (64.280,64.404,47.911)
OP1: (61.777,63.258,43.833)
OP2: (60.460,61.424,45.029)
C4: (58.856,61.321,50.672)
O5': (61.148,63.537,46.220)
C3': (62.945,64.190,48.316)
C1': (61.225,64.668,49.848)
O4': (60.868,65.231,48.592)
C5': (61.611,64.910,46.293)
P: (60.764,62.859,44.826)
O2: (60.245,64.030,52.316)
C4': (62.026,65.237,47.712)
C2': (62.723,64.350,49.810)
O2': (63.466,65.415,50.365)
N1: (60.371,63.487,50.104)
N3: (59.172,62.156,51.664)
N4: (58.127,60.234,50.968)
C6: (60.024,62.635,49.093)
C5: (59.276,61.550,49.330)
O3': (64.280,64.404,47.911)
Image (generated by PyMOL):