ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A1957:A1958

Extra

PDB:
ATOM 1 O3' A A1956 114.050 119.402 92.498 1.00 46.44 O
ATOM 2 P A A1957 114.574 118.914 91.054 1.00 47.18 P
ATOM 3 OP1 A A1957 113.688 117.794 90.718 1.00 47.99 O
ATOM 4 OP2 A A1957 116.047 118.694 91.042 1.00 49.99 O
ATOM 5 O5' A A1957 114.211 120.117 90.072 1.00 47.06 O
ATOM 6 C5' A A1957 112.836 120.368 89.745 1.00 51.51 C
ATOM 7 C4' A A1957 112.673 121.601 88.877 1.00 52.58 C
ATOM 8 O4' A A1957 113.349 122.758 89.390 1.00 54.03 O
ATOM 9 C3' A A1957 112.887 121.533 87.374 1.00 51.46 C
ATOM 10 O3' A A1957 111.643 121.724 86.700 1.00 48.94 O
ATOM 11 C2' A A1957 113.838 122.695 87.084 1.00 53.03 C
ATOM 12 O2' A A1957 113.396 123.396 85.941 1.00 52.75 O
ATOM 13 C1' A A1957 113.696 123.593 88.318 1.00 54.58 C
ATOM 14 N9 A A1957 114.943 124.282 88.670 1.00 57.44 N
ATOM 15 C8 A A1957 116.072 123.768 89.272 1.00 58.54 C
ATOM 16 N7 A A1957 117.039 124.643 89.415 1.00 58.85 N
ATOM 17 C5 A A1957 116.510 125.812 88.882 1.00 59.22 C
ATOM 18 C6 A A1957 117.032 127.111 88.729 1.00 60.53 C
ATOM 19 N6 A A1957 118.265 127.470 89.094 1.00 61.35 N
ATOM 20 N1 A A1957 116.229 128.045 88.173 1.00 60.97 N
ATOM 21 C2 A A1957 114.996 127.688 87.794 1.00 60.22 C
ATOM 22 N3 A A1957 114.401 126.506 87.873 1.00 59.20 N
ATOM 23 C4 A A1957 115.218 125.604 88.433 1.00 58.31 C
ATOM 24 P U A1958 110.558 120.531 86.647 1.00 45.99 P
ATOM 25 OP1 U A1958 111.236 119.270 86.283 1.00 45.69 O
ATOM 26 OP2 U A1958 109.386 120.964 85.860 1.00 46.56 O
ATOM 27 O5' U A1958 110.095 120.450 88.162 1.00 44.81 O
TER

ATOM 1 O3' A B1957 111.643 121.724 86.700 1.00 48.94 O
ATOM 2 P U B1958 110.558 120.531 86.647 1.00 45.99 P
ATOM 3 OP1 U B1958 111.236 119.270 86.283 1.00 45.69 O
ATOM 4 OP2 U B1958 109.386 120.964 85.860 1.00 46.56 O
ATOM 5 O5' U B1958 110.095 120.450 88.162 1.00 44.81 O
ATOM 6 C5' U B1958 109.718 119.216 88.728 1.00 46.22 C
ATOM 7 C4' U B1958 108.227 119.160 88.816 1.00 48.32 C
ATOM 8 O4' U B1958 107.818 117.789 89.020 1.00 49.52 O
ATOM 9 C3' U B1958 107.558 119.965 89.919 1.00 47.42 C
ATOM 10 O3' U B1958 107.447 121.348 89.532 1.00 44.95 O
ATOM 11 C2' U B1958 106.227 119.219 90.052 1.00 49.11 C
ATOM 12 O2' U B1958 105.319 119.577 89.021 1.00 47.91 O
ATOM 13 C1' U B1958 106.647 117.764 89.789 1.00 49.40 C
ATOM 14 N1 U B1958 106.901 116.900 90.954 1.00 49.15 N
ATOM 15 C2 U B1958 106.768 115.544 90.760 1.00 49.55 C
ATOM 16 O2 U B1958 106.527 115.051 89.660 1.00 50.82 O
ATOM 17 N3 U B1958 106.941 114.776 91.882 1.00 48.38 N
ATOM 18 C4 U B1958 107.246 115.209 93.136 1.00 48.26 C
ATOM 19 O4 U B1958 107.299 114.394 94.048 1.00 51.10 O
ATOM 20 C5 U B1958 107.414 116.619 93.255 1.00 48.83 C
ATOM 21 C6 U B1958 107.239 117.400 92.184 1.00 48.83 C
ATOM 22 P G B1959 106.611 122.387 90.440 1.00 43.12 P
ATOM 23 OP1 G B1959 105.671 121.598 91.243 1.00 46.63 O
ATOM 24 OP2 G B1959 106.107 123.460 89.577 1.00 43.43 O
ATOM 25 O5' G B1959 107.638 123.003 91.487 1.00 45.73 O
TER

Atoms:
OP1: (113.688,117.794,90.718)
OP2: (116.047,118.694,91.042)
C3': (112.887,121.533,87.374)
C1': (113.696,123.593,88.318)
C5': (112.836,120.368,89.745)
O4': (113.349,122.758,89.390)
C8: (116.072,123.768,89.272)
O2': (113.396,123.396,85.941)
C6: (117.032,127.111,88.729)
C5: (116.510,125.812,88.882)
C4: (115.218,125.604,88.433)
P: (114.574,118.914,91.054)
C4': (112.673,121.601,88.877)
C2': (113.838,122.695,87.084)
C2: (114.996,127.688,87.794)
N1: (116.229,128.045,88.173)
N3: (114.401,126.506,87.873)
N6: (118.265,127.470,89.094)
N7: (117.039,124.643,89.415)
N9: (114.943,124.282,88.670)
O5': (114.211,120.117,90.072)
O3': (111.643,121.724,86.700)
C4: (107.246,115.209,93.136)
N3: (106.941,114.776,91.882)
OP1: (111.236,119.270,86.283)
OP2: (109.386,120.964,85.860)
C2: (106.768,115.544,90.760)
C1': (106.647,117.764,89.789)
C3': (107.558,119.965,89.919)
O5': (110.095,120.450,88.162)
O4': (107.818,117.789,89.020)
C5': (109.718,119.216,88.728)
P: (110.558,120.531,86.647)
C4': (108.227,119.160,88.816)
C2': (106.227,119.219,90.052)
O2': (105.319,119.577,89.021)
N1: (106.901,116.900,90.954)
O4: (107.299,114.394,94.048)
O2: (106.527,115.051,89.660)
C6: (107.239,117.400,92.184)
C5: (107.414,116.619,93.255)
O3': (107.447,121.348,89.532)
Image (generated by PyMOL):
PyMOL image
show in jmol