Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A488:A1313
Extra
PDB:
ATOM 1 O3' G A 487 -19.254 -93.948 6.442 1.00 0.01 O
ATOM 2 P G A 488 -17.823 -93.465 5.897 1.00 0.01 P
ATOM 3 OP1 G A 488 -18.061 -92.557 4.761 1.00 0.01 O
ATOM 4 OP2 G A 488 -16.996 -94.671 5.674 1.00 0.01 O
ATOM 5 O5' G A 488 -17.267 -92.642 7.106 1.00 0.01 O
ATOM 6 C5' G A 488 -16.061 -91.941 6.961 1.00 0.01 C
ATOM 7 C4' G A 488 -15.989 -90.785 7.888 1.00 0.01 C
ATOM 8 O4' G A 488 -17.077 -89.901 7.588 1.00 0.01 O
ATOM 9 C3' G A 488 -16.116 -91.146 9.353 1.00 0.01 C
ATOM 10 O3' G A 488 -15.285 -90.293 10.122 1.00 0.01 O
ATOM 11 C2' G A 488 -17.562 -90.841 9.655 1.00 0.01 C
ATOM 12 O2' G A 488 -17.789 -90.511 10.990 1.00 0.01 O
ATOM 13 C1' G A 488 -17.815 -89.655 8.748 1.00 0.01 C
ATOM 14 N9 G A 488 -19.219 -89.456 8.371 1.00 0.01 N
ATOM 15 C8 G A 488 -19.966 -90.025 7.371 1.00 0.01 C
ATOM 16 N7 G A 488 -21.196 -89.578 7.323 1.00 0.01 N
ATOM 17 C5 G A 488 -21.267 -88.656 8.349 1.00 0.01 C
ATOM 18 C6 G A 488 -22.337 -87.845 8.816 1.00 0.01 C
ATOM 19 O6 G A 488 -23.514 -87.777 8.382 1.00 0.01 O
ATOM 20 N1 G A 488 -21.916 -87.060 9.905 1.00 0.01 N
ATOM 21 C2 G A 488 -20.639 -87.065 10.443 1.00 0.01 C
ATOM 22 N2 G A 488 -20.321 -86.278 11.493 1.00 0.01 N
ATOM 23 N3 G A 488 -19.679 -87.822 9.998 1.00 0.01 N
ATOM 24 C4 G A 488 -20.056 -88.573 8.974 1.00 0.01 C
ATOM 25 P C A 489 -13.760 -90.693 10.440 1.00 4.76 P
ATOM 26 OP1 C A 489 -12.949 -89.453 10.350 1.00 4.76 O
ATOM 27 OP2 C A 489 -13.414 -91.839 9.566 1.00 4.76 O
ATOM 28 O5' C A 489 -13.840 -91.174 11.938 1.00 4.76 O
TER
ATOM 1 O3' C B1312 -17.475 -83.425 15.013 1.00 0.01 O
ATOM 2 P C B1313 -17.987 -83.611 13.513 1.00 0.01 P
ATOM 3 OP1 C B1313 -18.282 -85.050 13.313 1.00 0.01 O
ATOM 4 OP2 C B1313 -17.007 -82.949 12.631 1.00 0.01 O
ATOM 5 O5' C B1313 -19.337 -82.810 13.530 1.00 0.01 O
ATOM 6 C5' C B1313 -20.269 -83.044 14.564 1.00 0.01 C
ATOM 7 C4' C B1313 -21.601 -82.451 14.249 1.00 0.01 C
ATOM 8 O4' C B1313 -21.537 -81.021 14.483 1.00 0.01 O
ATOM 9 C3' C B1313 -22.058 -82.636 12.812 1.00 0.01 C
ATOM 10 O3' C B1313 -23.442 -82.905 12.781 1.00 0.01 O
ATOM 11 C2' C B1313 -21.807 -81.284 12.186 1.00 0.01 C
ATOM 12 O2' C B1313 -22.667 -80.979 11.111 1.00 0.01 O
ATOM 13 C1' C B1313 -22.030 -80.345 13.361 1.00 0.01 C
ATOM 14 N1 C B1313 -21.327 -79.065 13.213 1.00 0.01 N
ATOM 15 C2 C B1313 -22.041 -77.890 13.269 1.00 0.01 C
ATOM 16 O2 C B1313 -23.233 -77.995 13.546 1.00 0.01 O
ATOM 17 N3 C B1313 -21.441 -76.696 13.041 1.00 0.01 N
ATOM 18 C4 C B1313 -20.147 -76.679 12.728 1.00 0.01 C
ATOM 19 N4 C B1313 -19.519 -75.521 12.508 1.00 0.01 N
ATOM 20 C5 C B1313 -19.402 -77.881 12.651 1.00 0.01 C
ATOM 21 C6 C B1313 -20.023 -79.037 12.873 1.00 0.01 C
ATOM 22 P A B1314 -23.985 -84.149 11.964 1.00 0.01 P
ATOM 23 OP1 A B1314 -23.409 -85.373 12.578 1.00 0.01 O
ATOM 24 OP2 A B1314 -23.746 -83.875 10.542 1.00 0.01 O
ATOM 25 O5' A B1314 -25.526 -84.093 12.257 1.00 0.01 O
TER
ATOM 2 P G A 488 -17.823 -93.465 5.897 1.00 0.01 P
ATOM 3 OP1 G A 488 -18.061 -92.557 4.761 1.00 0.01 O
ATOM 4 OP2 G A 488 -16.996 -94.671 5.674 1.00 0.01 O
ATOM 5 O5' G A 488 -17.267 -92.642 7.106 1.00 0.01 O
ATOM 6 C5' G A 488 -16.061 -91.941 6.961 1.00 0.01 C
ATOM 7 C4' G A 488 -15.989 -90.785 7.888 1.00 0.01 C
ATOM 8 O4' G A 488 -17.077 -89.901 7.588 1.00 0.01 O
ATOM 9 C3' G A 488 -16.116 -91.146 9.353 1.00 0.01 C
ATOM 10 O3' G A 488 -15.285 -90.293 10.122 1.00 0.01 O
ATOM 11 C2' G A 488 -17.562 -90.841 9.655 1.00 0.01 C
ATOM 12 O2' G A 488 -17.789 -90.511 10.990 1.00 0.01 O
ATOM 13 C1' G A 488 -17.815 -89.655 8.748 1.00 0.01 C
ATOM 14 N9 G A 488 -19.219 -89.456 8.371 1.00 0.01 N
ATOM 15 C8 G A 488 -19.966 -90.025 7.371 1.00 0.01 C
ATOM 16 N7 G A 488 -21.196 -89.578 7.323 1.00 0.01 N
ATOM 17 C5 G A 488 -21.267 -88.656 8.349 1.00 0.01 C
ATOM 18 C6 G A 488 -22.337 -87.845 8.816 1.00 0.01 C
ATOM 19 O6 G A 488 -23.514 -87.777 8.382 1.00 0.01 O
ATOM 20 N1 G A 488 -21.916 -87.060 9.905 1.00 0.01 N
ATOM 21 C2 G A 488 -20.639 -87.065 10.443 1.00 0.01 C
ATOM 22 N2 G A 488 -20.321 -86.278 11.493 1.00 0.01 N
ATOM 23 N3 G A 488 -19.679 -87.822 9.998 1.00 0.01 N
ATOM 24 C4 G A 488 -20.056 -88.573 8.974 1.00 0.01 C
ATOM 25 P C A 489 -13.760 -90.693 10.440 1.00 4.76 P
ATOM 26 OP1 C A 489 -12.949 -89.453 10.350 1.00 4.76 O
ATOM 27 OP2 C A 489 -13.414 -91.839 9.566 1.00 4.76 O
ATOM 28 O5' C A 489 -13.840 -91.174 11.938 1.00 4.76 O
TER
ATOM 1 O3' C B1312 -17.475 -83.425 15.013 1.00 0.01 O
ATOM 2 P C B1313 -17.987 -83.611 13.513 1.00 0.01 P
ATOM 3 OP1 C B1313 -18.282 -85.050 13.313 1.00 0.01 O
ATOM 4 OP2 C B1313 -17.007 -82.949 12.631 1.00 0.01 O
ATOM 5 O5' C B1313 -19.337 -82.810 13.530 1.00 0.01 O
ATOM 6 C5' C B1313 -20.269 -83.044 14.564 1.00 0.01 C
ATOM 7 C4' C B1313 -21.601 -82.451 14.249 1.00 0.01 C
ATOM 8 O4' C B1313 -21.537 -81.021 14.483 1.00 0.01 O
ATOM 9 C3' C B1313 -22.058 -82.636 12.812 1.00 0.01 C
ATOM 10 O3' C B1313 -23.442 -82.905 12.781 1.00 0.01 O
ATOM 11 C2' C B1313 -21.807 -81.284 12.186 1.00 0.01 C
ATOM 12 O2' C B1313 -22.667 -80.979 11.111 1.00 0.01 O
ATOM 13 C1' C B1313 -22.030 -80.345 13.361 1.00 0.01 C
ATOM 14 N1 C B1313 -21.327 -79.065 13.213 1.00 0.01 N
ATOM 15 C2 C B1313 -22.041 -77.890 13.269 1.00 0.01 C
ATOM 16 O2 C B1313 -23.233 -77.995 13.546 1.00 0.01 O
ATOM 17 N3 C B1313 -21.441 -76.696 13.041 1.00 0.01 N
ATOM 18 C4 C B1313 -20.147 -76.679 12.728 1.00 0.01 C
ATOM 19 N4 C B1313 -19.519 -75.521 12.508 1.00 0.01 N
ATOM 20 C5 C B1313 -19.402 -77.881 12.651 1.00 0.01 C
ATOM 21 C6 C B1313 -20.023 -79.037 12.873 1.00 0.01 C
ATOM 22 P A B1314 -23.985 -84.149 11.964 1.00 0.01 P
ATOM 23 OP1 A B1314 -23.409 -85.373 12.578 1.00 0.01 O
ATOM 24 OP2 A B1314 -23.746 -83.875 10.542 1.00 0.01 O
ATOM 25 O5' A B1314 -25.526 -84.093 12.257 1.00 0.01 O
TER
Atoms:
OP1: (-18.061,-92.557,4.761)
OP2: (-16.996,-94.671,5.674)
C3': (-16.116,-91.146,9.353)
C1': (-17.815,-89.655,8.748)
C5': (-16.061,-91.941,6.961)
O6: (-23.514,-87.777,8.382)
O4': (-17.077,-89.901,7.588)
C8: (-19.966,-90.025,7.371)
C2: (-20.639,-87.065,10.443)
C6: (-22.337,-87.845,8.816)
C5: (-21.267,-88.656,8.349)
C4: (-20.056,-88.573,8.974)
P: (-17.823,-93.465,5.897)
C4': (-15.989,-90.785,7.888)
C2': (-17.562,-90.841,9.655)
O2': (-17.789,-90.511,10.990)
N1: (-21.916,-87.060,9.905)
N2: (-20.321,-86.278,11.493)
N3: (-19.679,-87.822,9.998)
N7: (-21.196,-89.578,7.323)
N9: (-19.219,-89.456,8.371)
O5': (-17.267,-92.642,7.106)
O3': (-15.285,-90.293,10.122)
OP2: (-16.996,-94.671,5.674)
C3': (-16.116,-91.146,9.353)
C1': (-17.815,-89.655,8.748)
C5': (-16.061,-91.941,6.961)
O6: (-23.514,-87.777,8.382)
O4': (-17.077,-89.901,7.588)
C8: (-19.966,-90.025,7.371)
C2: (-20.639,-87.065,10.443)
C6: (-22.337,-87.845,8.816)
C5: (-21.267,-88.656,8.349)
C4: (-20.056,-88.573,8.974)
P: (-17.823,-93.465,5.897)
C4': (-15.989,-90.785,7.888)
C2': (-17.562,-90.841,9.655)
O2': (-17.789,-90.511,10.990)
N1: (-21.916,-87.060,9.905)
N2: (-20.321,-86.278,11.493)
N3: (-19.679,-87.822,9.998)
N7: (-21.196,-89.578,7.323)
N9: (-19.219,-89.456,8.371)
O5': (-17.267,-92.642,7.106)
O3': (-15.285,-90.293,10.122)
C2: (-22.041,-77.890,13.269)
OP1: (-18.282,-85.050,13.313)
OP2: (-17.007,-82.949,12.631)
C4: (-20.147,-76.679,12.728)
O5': (-19.337,-82.810,13.530)
C3': (-22.058,-82.636,12.812)
C1': (-22.030,-80.345,13.361)
O4': (-21.537,-81.021,14.483)
C5': (-20.269,-83.044,14.564)
P: (-17.987,-83.611,13.513)
O2: (-23.233,-77.995,13.546)
C4': (-21.601,-82.451,14.249)
C2': (-21.807,-81.284,12.186)
O2': (-22.667,-80.979,11.111)
N1: (-21.327,-79.065,13.213)
N3: (-21.441,-76.696,13.041)
N4: (-19.519,-75.521,12.508)
C6: (-20.023,-79.037,12.873)
C5: (-19.402,-77.881,12.651)
O3': (-23.442,-82.905,12.781)
OP1: (-18.282,-85.050,13.313)
OP2: (-17.007,-82.949,12.631)
C4: (-20.147,-76.679,12.728)
O5': (-19.337,-82.810,13.530)
C3': (-22.058,-82.636,12.812)
C1': (-22.030,-80.345,13.361)
O4': (-21.537,-81.021,14.483)
C5': (-20.269,-83.044,14.564)
P: (-17.987,-83.611,13.513)
O2: (-23.233,-77.995,13.546)
C4': (-21.601,-82.451,14.249)
C2': (-21.807,-81.284,12.186)
O2': (-22.667,-80.979,11.111)
N1: (-21.327,-79.065,13.213)
N3: (-21.441,-76.696,13.041)
N4: (-19.519,-75.521,12.508)
C6: (-20.023,-79.037,12.873)
C5: (-19.402,-77.881,12.651)
O3': (-23.442,-82.905,12.781)
Image (generated by PyMOL):