ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJ9:01957:01958

Extra

PDB:
ATOM 1 O3' A A1956 114.215 119.303 92.465 1.00 54.88 O
ATOM 2 P A A1957 114.871 118.896 91.053 1.00 55.82 P
ATOM 3 OP1 A A1957 114.185 117.670 90.583 1.00 57.36 O
ATOM 4 OP2 A A1957 116.345 118.893 91.210 1.00 59.01 O
ATOM 5 O5' A A1957 114.463 120.077 90.060 1.00 55.10 O
ATOM 6 C5' A A1957 113.094 120.472 89.949 1.00 57.73 C
ATOM 7 C4' A A1957 112.920 121.654 89.015 1.00 57.52 C
ATOM 8 O4' A A1957 113.705 122.784 89.450 1.00 57.34 O
ATOM 9 C3' A A1957 113.186 121.487 87.521 1.00 56.97 C
ATOM 10 O3' A A1957 111.997 121.786 86.788 1.00 55.44 O
ATOM 11 C2' A A1957 114.263 122.537 87.234 1.00 58.36 C
ATOM 12 O2' A A1957 114.087 123.157 85.976 1.00 61.86 O
ATOM 13 C1' A A1957 114.021 123.565 88.331 1.00 57.85 C
ATOM 14 N9 A A1957 115.218 124.343 88.649 1.00 58.16 N
ATOM 15 C8 A A1957 116.348 123.921 89.303 1.00 57.46 C
ATOM 16 N7 A A1957 117.249 124.857 89.458 1.00 57.45 N
ATOM 17 C5 A A1957 116.678 125.968 88.864 1.00 58.34 C
ATOM 18 C6 A A1957 117.128 127.284 88.703 1.00 59.66 C
ATOM 19 N6 A A1957 118.308 127.722 89.136 1.00 60.35 N
ATOM 20 N1 A A1957 116.312 128.151 88.069 1.00 61.58 N
ATOM 21 C2 A A1957 115.130 127.712 87.628 1.00 60.07 C
ATOM 22 N3 A A1957 114.598 126.499 87.717 1.00 59.69 N
ATOM 23 C4 A A1957 115.431 125.665 88.356 1.00 58.51 C
ATOM 24 P U A1958 110.859 120.652 86.623 1.00 53.12 P
ATOM 25 OP1 U A1958 111.465 119.351 86.234 1.00 52.22 O
ATOM 26 OP2 U A1958 109.779 121.209 85.795 1.00 55.22 O
ATOM 27 O5' U A1958 110.273 120.557 88.100 1.00 50.44 O
TER

ATOM 1 O3' A B1957 111.997 121.786 86.788 1.00 55.44 O
ATOM 2 P U B1958 110.859 120.652 86.623 1.00 53.12 P
ATOM 3 OP1 U B1958 111.465 119.351 86.234 1.00 52.22 O
ATOM 4 OP2 U B1958 109.779 121.209 85.795 1.00 55.22 O
ATOM 5 O5' U B1958 110.273 120.557 88.100 1.00 50.44 O
ATOM 6 C5' U B1958 109.854 119.316 88.643 1.00 50.41 C
ATOM 7 C4' U B1958 108.355 119.290 88.766 1.00 51.58 C
ATOM 8 O4' U B1958 107.950 117.922 88.994 1.00 51.59 O
ATOM 9 C3' U B1958 107.718 120.099 89.896 1.00 50.63 C
ATOM 10 O3' U B1958 107.558 121.476 89.494 1.00 49.18 O
ATOM 11 C2' U B1958 106.398 119.353 90.100 1.00 51.53 C
ATOM 12 O2' U B1958 105.421 119.683 89.130 1.00 51.14 O
ATOM 13 C1' U B1958 106.816 117.904 89.828 1.00 52.29 C
ATOM 14 N1 U B1958 107.098 117.016 90.968 1.00 53.43 N
ATOM 15 C2 U B1958 107.081 115.658 90.710 1.00 53.28 C
ATOM 16 O2 U B1958 106.883 115.198 89.599 1.00 54.16 O
ATOM 17 N3 U B1958 107.305 114.855 91.795 1.00 53.16 N
ATOM 18 C4 U B1958 107.550 115.255 93.081 1.00 54.39 C
ATOM 19 O4 U B1958 107.727 114.402 93.946 1.00 57.29 O
ATOM 20 C5 U B1958 107.574 116.674 93.275 1.00 54.17 C
ATOM 21 C6 U B1958 107.355 117.488 92.236 1.00 54.54 C
ATOM 22 P G B1959 106.767 122.536 90.432 1.00 47.36 P
ATOM 23 OP1 G B1959 105.757 121.862 91.270 1.00 52.88 O
ATOM 24 OP2 G B1959 106.358 123.664 89.569 1.00 47.88 O
ATOM 25 O5' G B1959 107.837 123.090 91.465 1.00 50.55 O
TER

Atoms:
OP1: (114.185,117.670,90.583)
OP2: (116.345,118.893,91.210)
C3': (113.186,121.487,87.521)
C1': (114.021,123.565,88.331)
C5': (113.094,120.472,89.949)
O4': (113.705,122.784,89.450)
C8: (116.348,123.921,89.303)
O2': (114.087,123.157,85.976)
C6: (117.128,127.284,88.703)
C5: (116.678,125.968,88.864)
C4: (115.431,125.665,88.356)
P: (114.871,118.896,91.053)
C4': (112.920,121.654,89.015)
C2': (114.263,122.537,87.234)
C2: (115.130,127.712,87.628)
N1: (116.312,128.151,88.069)
N3: (114.598,126.499,87.717)
N6: (118.308,127.722,89.136)
N7: (117.249,124.857,89.458)
N9: (115.218,124.343,88.649)
O5': (114.463,120.077,90.060)
O3': (111.997,121.786,86.788)
C4: (107.550,115.255,93.081)
N3: (107.305,114.855,91.795)
OP1: (111.465,119.351,86.234)
OP2: (109.779,121.209,85.795)
C2: (107.081,115.658,90.710)
C1': (106.816,117.904,89.828)
C3': (107.718,120.099,89.896)
O5': (110.273,120.557,88.100)
O4': (107.950,117.922,88.994)
C5': (109.854,119.316,88.643)
P: (110.859,120.652,86.623)
C4': (108.355,119.290,88.766)
C2': (106.398,119.353,90.100)
O2': (105.421,119.683,89.130)
N1: (107.098,117.016,90.968)
O4: (107.727,114.402,93.946)
O2: (106.883,115.198,89.599)
C6: (107.355,117.488,92.236)
C5: (107.574,116.674,93.275)
O3': (107.558,121.476,89.494)
Image (generated by PyMOL):
PyMOL image
show in jmol