Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0678:0719
Extra
PDB:
ATOM 1 O3' G A 677 52.401 71.377 48.035 1.00 52.12 O
ATOM 2 P G A 678 53.725 72.028 48.662 1.00 52.14 P
ATOM 3 OP1 G A 678 53.475 72.215 50.107 1.00 51.02 O
ATOM 4 OP2 G A 678 54.147 73.184 47.827 1.00 52.84 O
ATOM 5 O5' G A 678 54.826 70.902 48.478 1.00 50.53 O
ATOM 6 C5' G A 678 54.671 69.632 49.091 1.00 49.32 C
ATOM 7 C4' G A 678 55.769 68.720 48.640 1.00 49.82 C
ATOM 8 O4' G A 678 55.609 68.437 47.230 1.00 48.90 O
ATOM 9 C3' G A 678 57.167 69.305 48.716 1.00 49.88 C
ATOM 10 O3' G A 678 57.700 69.260 50.034 1.00 51.09 O
ATOM 11 C2' G A 678 57.927 68.396 47.764 1.00 49.36 C
ATOM 12 O2' G A 678 58.238 67.162 48.381 1.00 48.14 O
ATOM 13 C1' G A 678 56.882 68.177 46.663 1.00 49.55 C
ATOM 14 N9 G A 678 57.065 69.019 45.481 1.00 50.61 N
ATOM 15 C8 G A 678 56.449 70.214 45.191 1.00 51.24 C
ATOM 16 N7 G A 678 56.850 70.736 44.062 1.00 51.88 N
ATOM 17 C5 G A 678 57.784 69.830 43.575 1.00 51.59 C
ATOM 18 C6 G A 678 58.577 69.861 42.391 1.00 53.46 C
ATOM 19 O6 G A 678 58.625 70.737 41.505 1.00 53.76 O
ATOM 20 N1 G A 678 59.386 68.732 42.293 1.00 53.20 N
ATOM 21 C2 G A 678 59.436 67.713 43.209 1.00 51.92 C
ATOM 22 N2 G A 678 60.286 66.709 42.948 1.00 52.08 N
ATOM 23 N3 G A 678 58.711 67.677 44.306 1.00 51.88 N
ATOM 24 C4 G A 678 57.917 68.760 44.429 1.00 51.13 C
ATOM 25 P G A 679 58.843 70.305 50.462 1.00 51.86 P
ATOM 26 OP1 G A 679 59.278 69.967 51.842 1.00 51.17 O
ATOM 27 OP2 G A 679 58.346 71.659 50.168 1.00 50.81 O
ATOM 28 O5' G A 679 60.044 69.964 49.477 1.00 50.68 O
TER
ATOM 1 O3' U B 718 59.385 63.906 44.211 1.00 52.49 O
ATOM 2 P C B 719 60.768 63.192 44.605 1.00 54.48 P
ATOM 3 OP1 C B 719 61.794 63.647 43.640 1.00 55.26 O
ATOM 4 OP2 C B 719 60.506 61.751 44.768 1.00 55.59 O
ATOM 5 O5' C B 719 61.133 63.785 46.037 1.00 55.96 O
ATOM 6 C5' C B 719 61.575 65.153 46.197 1.00 55.18 C
ATOM 7 C4' C B 719 61.996 65.400 47.628 1.00 54.55 C
ATOM 8 O4' C B 719 60.847 65.362 48.513 1.00 53.71 O
ATOM 9 C3' C B 719 62.938 64.357 48.193 1.00 54.30 C
ATOM 10 O3' C B 719 64.258 64.644 47.790 1.00 55.79 O
ATOM 11 C2' C B 719 62.726 64.488 49.696 1.00 53.99 C
ATOM 12 O2' C B 719 63.431 65.562 50.276 1.00 53.98 O
ATOM 13 C1' C B 719 61.230 64.803 49.762 1.00 55.10 C
ATOM 14 N1 C B 719 60.370 63.637 50.056 1.00 55.05 N
ATOM 15 C2 C B 719 60.018 63.377 51.383 1.00 54.48 C
ATOM 16 O2 C B 719 60.429 64.124 52.274 1.00 54.24 O
ATOM 17 N3 C B 719 59.235 62.322 51.662 1.00 55.52 N
ATOM 18 C4 C B 719 58.796 61.541 50.680 1.00 56.29 C
ATOM 19 N4 C B 719 58.017 60.507 51.007 1.00 57.78 N
ATOM 20 C5 C B 719 59.135 61.781 49.319 1.00 56.10 C
ATOM 21 C6 C B 719 59.918 62.826 49.055 1.00 55.22 C
ATOM 22 P U B 720 65.322 63.459 47.662 1.00 59.59 P
ATOM 23 OP1 U B 720 66.593 64.066 47.186 1.00 60.79 O
ATOM 24 OP2 U B 720 64.717 62.331 46.912 1.00 59.79 O
ATOM 25 O5' U B 720 65.554 63.007 49.165 1.00 60.59 O
TER
ATOM 2 P G A 678 53.725 72.028 48.662 1.00 52.14 P
ATOM 3 OP1 G A 678 53.475 72.215 50.107 1.00 51.02 O
ATOM 4 OP2 G A 678 54.147 73.184 47.827 1.00 52.84 O
ATOM 5 O5' G A 678 54.826 70.902 48.478 1.00 50.53 O
ATOM 6 C5' G A 678 54.671 69.632 49.091 1.00 49.32 C
ATOM 7 C4' G A 678 55.769 68.720 48.640 1.00 49.82 C
ATOM 8 O4' G A 678 55.609 68.437 47.230 1.00 48.90 O
ATOM 9 C3' G A 678 57.167 69.305 48.716 1.00 49.88 C
ATOM 10 O3' G A 678 57.700 69.260 50.034 1.00 51.09 O
ATOM 11 C2' G A 678 57.927 68.396 47.764 1.00 49.36 C
ATOM 12 O2' G A 678 58.238 67.162 48.381 1.00 48.14 O
ATOM 13 C1' G A 678 56.882 68.177 46.663 1.00 49.55 C
ATOM 14 N9 G A 678 57.065 69.019 45.481 1.00 50.61 N
ATOM 15 C8 G A 678 56.449 70.214 45.191 1.00 51.24 C
ATOM 16 N7 G A 678 56.850 70.736 44.062 1.00 51.88 N
ATOM 17 C5 G A 678 57.784 69.830 43.575 1.00 51.59 C
ATOM 18 C6 G A 678 58.577 69.861 42.391 1.00 53.46 C
ATOM 19 O6 G A 678 58.625 70.737 41.505 1.00 53.76 O
ATOM 20 N1 G A 678 59.386 68.732 42.293 1.00 53.20 N
ATOM 21 C2 G A 678 59.436 67.713 43.209 1.00 51.92 C
ATOM 22 N2 G A 678 60.286 66.709 42.948 1.00 52.08 N
ATOM 23 N3 G A 678 58.711 67.677 44.306 1.00 51.88 N
ATOM 24 C4 G A 678 57.917 68.760 44.429 1.00 51.13 C
ATOM 25 P G A 679 58.843 70.305 50.462 1.00 51.86 P
ATOM 26 OP1 G A 679 59.278 69.967 51.842 1.00 51.17 O
ATOM 27 OP2 G A 679 58.346 71.659 50.168 1.00 50.81 O
ATOM 28 O5' G A 679 60.044 69.964 49.477 1.00 50.68 O
TER
ATOM 1 O3' U B 718 59.385 63.906 44.211 1.00 52.49 O
ATOM 2 P C B 719 60.768 63.192 44.605 1.00 54.48 P
ATOM 3 OP1 C B 719 61.794 63.647 43.640 1.00 55.26 O
ATOM 4 OP2 C B 719 60.506 61.751 44.768 1.00 55.59 O
ATOM 5 O5' C B 719 61.133 63.785 46.037 1.00 55.96 O
ATOM 6 C5' C B 719 61.575 65.153 46.197 1.00 55.18 C
ATOM 7 C4' C B 719 61.996 65.400 47.628 1.00 54.55 C
ATOM 8 O4' C B 719 60.847 65.362 48.513 1.00 53.71 O
ATOM 9 C3' C B 719 62.938 64.357 48.193 1.00 54.30 C
ATOM 10 O3' C B 719 64.258 64.644 47.790 1.00 55.79 O
ATOM 11 C2' C B 719 62.726 64.488 49.696 1.00 53.99 C
ATOM 12 O2' C B 719 63.431 65.562 50.276 1.00 53.98 O
ATOM 13 C1' C B 719 61.230 64.803 49.762 1.00 55.10 C
ATOM 14 N1 C B 719 60.370 63.637 50.056 1.00 55.05 N
ATOM 15 C2 C B 719 60.018 63.377 51.383 1.00 54.48 C
ATOM 16 O2 C B 719 60.429 64.124 52.274 1.00 54.24 O
ATOM 17 N3 C B 719 59.235 62.322 51.662 1.00 55.52 N
ATOM 18 C4 C B 719 58.796 61.541 50.680 1.00 56.29 C
ATOM 19 N4 C B 719 58.017 60.507 51.007 1.00 57.78 N
ATOM 20 C5 C B 719 59.135 61.781 49.319 1.00 56.10 C
ATOM 21 C6 C B 719 59.918 62.826 49.055 1.00 55.22 C
ATOM 22 P U B 720 65.322 63.459 47.662 1.00 59.59 P
ATOM 23 OP1 U B 720 66.593 64.066 47.186 1.00 60.79 O
ATOM 24 OP2 U B 720 64.717 62.331 46.912 1.00 59.79 O
ATOM 25 O5' U B 720 65.554 63.007 49.165 1.00 60.59 O
TER
Atoms:
OP1: (53.475,72.215,50.107)
OP2: (54.147,73.184,47.827)
C3': (57.167,69.305,48.716)
C1': (56.882,68.177,46.663)
C5': (54.671,69.632,49.091)
O6: (58.625,70.737,41.505)
O4': (55.609,68.437,47.230)
C8: (56.449,70.214,45.191)
C2: (59.436,67.713,43.209)
C6: (58.577,69.861,42.391)
C5: (57.784,69.830,43.575)
C4: (57.917,68.760,44.429)
P: (53.725,72.028,48.662)
C4': (55.769,68.720,48.640)
C2': (57.927,68.396,47.764)
O2': (58.238,67.162,48.381)
N1: (59.386,68.732,42.293)
N2: (60.286,66.709,42.948)
N3: (58.711,67.677,44.306)
N7: (56.850,70.736,44.062)
N9: (57.065,69.019,45.481)
O5': (54.826,70.902,48.478)
O3': (57.700,69.260,50.034)
OP2: (54.147,73.184,47.827)
C3': (57.167,69.305,48.716)
C1': (56.882,68.177,46.663)
C5': (54.671,69.632,49.091)
O6: (58.625,70.737,41.505)
O4': (55.609,68.437,47.230)
C8: (56.449,70.214,45.191)
C2: (59.436,67.713,43.209)
C6: (58.577,69.861,42.391)
C5: (57.784,69.830,43.575)
C4: (57.917,68.760,44.429)
P: (53.725,72.028,48.662)
C4': (55.769,68.720,48.640)
C2': (57.927,68.396,47.764)
O2': (58.238,67.162,48.381)
N1: (59.386,68.732,42.293)
N2: (60.286,66.709,42.948)
N3: (58.711,67.677,44.306)
N7: (56.850,70.736,44.062)
N9: (57.065,69.019,45.481)
O5': (54.826,70.902,48.478)
O3': (57.700,69.260,50.034)
C2: (60.018,63.377,51.383)
OP1: (61.794,63.647,43.640)
OP2: (60.506,61.751,44.768)
C4: (58.796,61.541,50.680)
O5': (61.133,63.785,46.037)
C3': (62.938,64.357,48.193)
C1': (61.230,64.803,49.762)
O4': (60.847,65.362,48.513)
C5': (61.575,65.153,46.197)
P: (60.768,63.192,44.605)
O2: (60.429,64.124,52.274)
C4': (61.996,65.400,47.628)
C2': (62.726,64.488,49.696)
O2': (63.431,65.562,50.276)
N1: (60.370,63.637,50.056)
N3: (59.235,62.322,51.662)
N4: (58.017,60.507,51.007)
C6: (59.918,62.826,49.055)
C5: (59.135,61.781,49.319)
O3': (64.258,64.644,47.790)
OP1: (61.794,63.647,43.640)
OP2: (60.506,61.751,44.768)
C4: (58.796,61.541,50.680)
O5': (61.133,63.785,46.037)
C3': (62.938,64.357,48.193)
C1': (61.230,64.803,49.762)
O4': (60.847,65.362,48.513)
C5': (61.575,65.153,46.197)
P: (60.768,63.192,44.605)
O2: (60.429,64.124,52.274)
C4': (61.996,65.400,47.628)
C2': (62.726,64.488,49.696)
O2': (63.431,65.562,50.276)
N1: (60.370,63.637,50.056)
N3: (59.235,62.322,51.662)
N4: (58.017,60.507,51.007)
C6: (59.918,62.826,49.055)
C5: (59.135,61.781,49.319)
O3': (64.258,64.644,47.790)
Image (generated by PyMOL):