Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02257:02172
Extra
PDB:
ATOM 1 O3' A A2256 63.008 36.793 76.369 1.00 54.43 O
ATOM 2 P G A2257 63.279 38.192 75.597 1.00 57.83 P
ATOM 3 OP1 G A2257 61.970 38.907 75.612 1.00 55.02 O
ATOM 4 OP2 G A2257 63.968 37.925 74.290 1.00 55.96 O
ATOM 5 O5' G A2257 64.320 39.007 76.500 1.00 55.34 O
ATOM 6 C5' G A2257 64.109 39.190 77.909 1.00 54.74 C
ATOM 7 C4' G A2257 65.432 39.393 78.614 1.00 54.99 C
ATOM 8 O4' G A2257 66.381 38.406 78.131 1.00 54.76 O
ATOM 9 C3' G A2257 66.153 40.703 78.350 1.00 56.16 C
ATOM 10 O3' G A2257 65.638 41.774 79.138 1.00 58.92 O
ATOM 11 C2' G A2257 67.587 40.358 78.726 1.00 53.89 C
ATOM 12 O2' G A2257 67.811 40.346 80.116 1.00 52.47 O
ATOM 13 C1' G A2257 67.697 38.937 78.184 1.00 52.56 C
ATOM 14 N9 G A2257 68.280 38.909 76.845 1.00 50.94 N
ATOM 15 C8 G A2257 67.626 38.805 75.640 1.00 49.65 C
ATOM 16 N7 G A2257 68.436 38.827 74.613 1.00 49.82 N
ATOM 17 C5 G A2257 69.700 38.949 75.175 1.00 49.28 C
ATOM 18 C6 G A2257 70.982 39.028 74.560 1.00 49.68 C
ATOM 19 O6 G A2257 71.265 39.004 73.355 1.00 50.41 O
ATOM 20 N1 G A2257 71.994 39.145 75.507 1.00 49.05 N
ATOM 21 C2 G A2257 71.803 39.178 76.867 1.00 49.32 C
ATOM 22 N2 G A2257 72.904 39.284 77.620 1.00 49.61 N
ATOM 23 N3 G A2257 70.621 39.110 77.448 1.00 49.03 N
ATOM 24 C4 G A2257 69.621 38.997 76.550 1.00 49.76 C
ATOM 25 P C A2258 65.564 43.255 78.513 1.00 59.57 P
ATOM 26 OP1 C A2258 64.527 43.999 79.282 1.00 59.50 O
ATOM 27 OP2 C A2258 65.438 43.143 77.031 1.00 59.48 O
ATOM 28 O5' C A2258 66.997 43.865 78.828 1.00 55.99 O
TER
ATOM 1 O3' U B2171 74.453 40.503 79.884 1.00 59.88 O
ATOM 2 P C B2172 73.958 39.773 81.231 1.00 60.71 P
ATOM 3 OP1 C B2172 72.658 39.122 80.922 1.00 60.24 O
ATOM 4 OP2 C B2172 74.042 40.743 82.356 1.00 61.83 O
ATOM 5 O5' C B2172 75.053 38.638 81.478 1.00 61.02 O
ATOM 6 C5' C B2172 75.161 37.515 80.581 1.00 61.28 C
ATOM 7 C4' C B2172 76.459 36.770 80.806 1.00 61.77 C
ATOM 8 O4' C B2172 77.579 37.682 80.659 1.00 60.51 O
ATOM 9 C3' C B2172 76.683 36.156 82.180 1.00 62.00 C
ATOM 10 O3' C B2172 75.982 34.922 82.327 1.00 61.75 O
ATOM 11 C2' C B2172 78.197 35.967 82.189 1.00 61.88 C
ATOM 12 O2' C B2172 78.633 34.851 81.432 1.00 62.80 O
ATOM 13 C1' C B2172 78.655 37.238 81.472 1.00 61.07 C
ATOM 14 N1 C B2172 79.056 38.322 82.390 1.00 59.37 N
ATOM 15 C2 C B2172 80.364 38.313 82.909 1.00 58.91 C
ATOM 16 O2 C B2172 81.128 37.390 82.600 1.00 58.39 O
ATOM 17 N3 C B2172 80.757 39.308 83.732 1.00 58.43 N
ATOM 18 C4 C B2172 79.908 40.285 84.047 1.00 58.09 C
ATOM 19 N4 C B2172 80.350 41.256 84.846 1.00 57.44 N
ATOM 20 C5 C B2172 78.567 40.314 83.551 1.00 57.98 C
ATOM 21 C6 C B2172 78.187 39.322 82.733 1.00 58.23 C
ATOM 22 P A B2173 75.552 34.415 83.791 1.00 59.77 P
ATOM 23 OP1 A B2173 74.679 33.233 83.561 1.00 61.60 O
ATOM 24 OP2 A B2173 75.043 35.554 84.592 1.00 59.74 O
ATOM 25 O5' A B2173 76.919 33.924 84.442 1.00 59.11 O
TER
ATOM 2 P G A2257 63.279 38.192 75.597 1.00 57.83 P
ATOM 3 OP1 G A2257 61.970 38.907 75.612 1.00 55.02 O
ATOM 4 OP2 G A2257 63.968 37.925 74.290 1.00 55.96 O
ATOM 5 O5' G A2257 64.320 39.007 76.500 1.00 55.34 O
ATOM 6 C5' G A2257 64.109 39.190 77.909 1.00 54.74 C
ATOM 7 C4' G A2257 65.432 39.393 78.614 1.00 54.99 C
ATOM 8 O4' G A2257 66.381 38.406 78.131 1.00 54.76 O
ATOM 9 C3' G A2257 66.153 40.703 78.350 1.00 56.16 C
ATOM 10 O3' G A2257 65.638 41.774 79.138 1.00 58.92 O
ATOM 11 C2' G A2257 67.587 40.358 78.726 1.00 53.89 C
ATOM 12 O2' G A2257 67.811 40.346 80.116 1.00 52.47 O
ATOM 13 C1' G A2257 67.697 38.937 78.184 1.00 52.56 C
ATOM 14 N9 G A2257 68.280 38.909 76.845 1.00 50.94 N
ATOM 15 C8 G A2257 67.626 38.805 75.640 1.00 49.65 C
ATOM 16 N7 G A2257 68.436 38.827 74.613 1.00 49.82 N
ATOM 17 C5 G A2257 69.700 38.949 75.175 1.00 49.28 C
ATOM 18 C6 G A2257 70.982 39.028 74.560 1.00 49.68 C
ATOM 19 O6 G A2257 71.265 39.004 73.355 1.00 50.41 O
ATOM 20 N1 G A2257 71.994 39.145 75.507 1.00 49.05 N
ATOM 21 C2 G A2257 71.803 39.178 76.867 1.00 49.32 C
ATOM 22 N2 G A2257 72.904 39.284 77.620 1.00 49.61 N
ATOM 23 N3 G A2257 70.621 39.110 77.448 1.00 49.03 N
ATOM 24 C4 G A2257 69.621 38.997 76.550 1.00 49.76 C
ATOM 25 P C A2258 65.564 43.255 78.513 1.00 59.57 P
ATOM 26 OP1 C A2258 64.527 43.999 79.282 1.00 59.50 O
ATOM 27 OP2 C A2258 65.438 43.143 77.031 1.00 59.48 O
ATOM 28 O5' C A2258 66.997 43.865 78.828 1.00 55.99 O
TER
ATOM 1 O3' U B2171 74.453 40.503 79.884 1.00 59.88 O
ATOM 2 P C B2172 73.958 39.773 81.231 1.00 60.71 P
ATOM 3 OP1 C B2172 72.658 39.122 80.922 1.00 60.24 O
ATOM 4 OP2 C B2172 74.042 40.743 82.356 1.00 61.83 O
ATOM 5 O5' C B2172 75.053 38.638 81.478 1.00 61.02 O
ATOM 6 C5' C B2172 75.161 37.515 80.581 1.00 61.28 C
ATOM 7 C4' C B2172 76.459 36.770 80.806 1.00 61.77 C
ATOM 8 O4' C B2172 77.579 37.682 80.659 1.00 60.51 O
ATOM 9 C3' C B2172 76.683 36.156 82.180 1.00 62.00 C
ATOM 10 O3' C B2172 75.982 34.922 82.327 1.00 61.75 O
ATOM 11 C2' C B2172 78.197 35.967 82.189 1.00 61.88 C
ATOM 12 O2' C B2172 78.633 34.851 81.432 1.00 62.80 O
ATOM 13 C1' C B2172 78.655 37.238 81.472 1.00 61.07 C
ATOM 14 N1 C B2172 79.056 38.322 82.390 1.00 59.37 N
ATOM 15 C2 C B2172 80.364 38.313 82.909 1.00 58.91 C
ATOM 16 O2 C B2172 81.128 37.390 82.600 1.00 58.39 O
ATOM 17 N3 C B2172 80.757 39.308 83.732 1.00 58.43 N
ATOM 18 C4 C B2172 79.908 40.285 84.047 1.00 58.09 C
ATOM 19 N4 C B2172 80.350 41.256 84.846 1.00 57.44 N
ATOM 20 C5 C B2172 78.567 40.314 83.551 1.00 57.98 C
ATOM 21 C6 C B2172 78.187 39.322 82.733 1.00 58.23 C
ATOM 22 P A B2173 75.552 34.415 83.791 1.00 59.77 P
ATOM 23 OP1 A B2173 74.679 33.233 83.561 1.00 61.60 O
ATOM 24 OP2 A B2173 75.043 35.554 84.592 1.00 59.74 O
ATOM 25 O5' A B2173 76.919 33.924 84.442 1.00 59.11 O
TER
Atoms:
OP1: (61.970,38.907,75.612)
OP2: (63.968,37.925,74.290)
C3': (66.153,40.703,78.350)
C1': (67.697,38.937,78.184)
C5': (64.109,39.190,77.909)
O6: (71.265,39.004,73.355)
O4': (66.381,38.406,78.131)
C8: (67.626,38.805,75.640)
C2: (71.803,39.178,76.867)
C6: (70.982,39.028,74.560)
C5: (69.700,38.949,75.175)
C4: (69.621,38.997,76.550)
P: (63.279,38.192,75.597)
C4': (65.432,39.393,78.614)
C2': (67.587,40.358,78.726)
O2': (67.811,40.346,80.116)
N1: (71.994,39.145,75.507)
N2: (72.904,39.284,77.620)
N3: (70.621,39.110,77.448)
N7: (68.436,38.827,74.613)
N9: (68.280,38.909,76.845)
O5': (64.320,39.007,76.500)
O3': (65.638,41.774,79.138)
OP2: (63.968,37.925,74.290)
C3': (66.153,40.703,78.350)
C1': (67.697,38.937,78.184)
C5': (64.109,39.190,77.909)
O6: (71.265,39.004,73.355)
O4': (66.381,38.406,78.131)
C8: (67.626,38.805,75.640)
C2: (71.803,39.178,76.867)
C6: (70.982,39.028,74.560)
C5: (69.700,38.949,75.175)
C4: (69.621,38.997,76.550)
P: (63.279,38.192,75.597)
C4': (65.432,39.393,78.614)
C2': (67.587,40.358,78.726)
O2': (67.811,40.346,80.116)
N1: (71.994,39.145,75.507)
N2: (72.904,39.284,77.620)
N3: (70.621,39.110,77.448)
N7: (68.436,38.827,74.613)
N9: (68.280,38.909,76.845)
O5': (64.320,39.007,76.500)
O3': (65.638,41.774,79.138)
C2: (80.364,38.313,82.909)
OP1: (72.658,39.122,80.922)
OP2: (74.042,40.743,82.356)
C4: (79.908,40.285,84.047)
O5': (75.053,38.638,81.478)
C3': (76.683,36.156,82.180)
C1': (78.655,37.238,81.472)
O4': (77.579,37.682,80.659)
C5': (75.161,37.515,80.581)
P: (73.958,39.773,81.231)
O2: (81.128,37.390,82.600)
C4': (76.459,36.770,80.806)
C2': (78.197,35.967,82.189)
O2': (78.633,34.851,81.432)
N1: (79.056,38.322,82.390)
N3: (80.757,39.308,83.732)
N4: (80.350,41.256,84.846)
C6: (78.187,39.322,82.733)
C5: (78.567,40.314,83.551)
O3': (75.982,34.922,82.327)
OP1: (72.658,39.122,80.922)
OP2: (74.042,40.743,82.356)
C4: (79.908,40.285,84.047)
O5': (75.053,38.638,81.478)
C3': (76.683,36.156,82.180)
C1': (78.655,37.238,81.472)
O4': (77.579,37.682,80.659)
C5': (75.161,37.515,80.581)
P: (73.958,39.773,81.231)
O2: (81.128,37.390,82.600)
C4': (76.459,36.770,80.806)
C2': (78.197,35.967,82.189)
O2': (78.633,34.851,81.432)
N1: (79.056,38.322,82.390)
N3: (80.757,39.308,83.732)
N4: (80.350,41.256,84.846)
C6: (78.187,39.322,82.733)
C5: (78.567,40.314,83.551)
O3': (75.982,34.922,82.327)
Image (generated by PyMOL):