ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:02587:02588

Extra

PDB:
ATOM 1 O3' C A2586 75.323 168.621 104.845 1.00 76.58 O
ATOM 2 P G A2587 75.464 168.807 106.440 1.00 80.62 P
ATOM 3 OP1 G A2587 75.890 170.207 106.731 1.00 80.68 O
ATOM 4 OP2 G A2587 76.266 167.669 106.967 1.00 80.42 O
ATOM 5 O5' G A2587 73.961 168.667 106.958 1.00 77.69 O
ATOM 6 C5' G A2587 72.889 168.462 106.020 1.00 73.86 C
ATOM 7 C4' G A2587 72.610 169.742 105.272 1.00 70.49 C
ATOM 8 O4' G A2587 72.626 169.496 103.843 1.00 70.51 O
ATOM 9 C3' G A2587 71.282 170.405 105.579 1.00 68.36 C
ATOM 10 O3' G A2587 71.440 171.806 105.503 1.00 65.01 O
ATOM 11 C2' G A2587 70.387 169.901 104.457 1.00 69.48 C
ATOM 12 O2' G A2587 69.329 170.798 104.182 1.00 71.86 O
ATOM 13 C1' G A2587 71.369 169.818 103.287 1.00 69.88 C
ATOM 14 N9 G A2587 71.037 168.782 102.308 1.00 69.51 N
ATOM 15 C8 G A2587 70.590 167.502 102.562 1.00 68.56 C
ATOM 16 N7 G A2587 70.370 166.813 101.478 1.00 68.30 N
ATOM 17 C5 G A2587 70.689 167.685 100.445 1.00 68.99 C
ATOM 18 C6 G A2587 70.646 167.500 99.039 1.00 69.03 C
ATOM 19 O6 G A2587 70.300 166.497 98.405 1.00 70.01 O
ATOM 20 N1 G A2587 71.061 168.641 98.359 1.00 67.85 N
ATOM 21 C2 G A2587 71.466 169.811 98.955 1.00 67.80 C
ATOM 22 N2 G A2587 71.831 170.802 98.130 1.00 67.11 N
ATOM 23 N3 G A2587 71.510 169.997 100.263 1.00 68.20 N
ATOM 24 C4 G A2587 71.110 168.901 100.942 1.00 68.72 C
ATOM 25 P U A2588 71.238 172.682 106.824 1.00 62.98 P
ATOM 26 OP1 U A2588 69.895 172.348 107.377 1.00 62.34 O
ATOM 27 OP2 U A2588 71.590 174.096 106.518 1.00 62.33 O
ATOM 28 O5' U A2588 72.308 172.082 107.837 1.00 63.17 O
TER

ATOM 1 O3' G B2587 71.440 171.806 105.503 1.00 65.01 O
ATOM 2 P U B2588 71.238 172.682 106.824 1.00 62.98 P
ATOM 3 OP1 U B2588 69.895 172.348 107.377 1.00 62.34 O
ATOM 4 OP2 U B2588 71.590 174.096 106.518 1.00 62.33 O
ATOM 5 O5' U B2588 72.308 172.082 107.837 1.00 63.17 O
ATOM 6 C5' U B2588 73.716 172.316 107.666 1.00 60.20 C
ATOM 7 C4' U B2588 74.107 173.572 108.400 1.00 58.06 C
ATOM 8 O4' U B2588 73.633 173.494 109.772 1.00 56.71 O
ATOM 9 C3' U B2588 75.590 173.899 108.467 1.00 56.87 C
ATOM 10 O3' U B2588 75.752 175.299 108.316 1.00 56.22 O
ATOM 11 C2' U B2588 75.982 173.439 109.870 1.00 56.09 C
ATOM 12 O2' U B2588 77.042 174.193 110.421 1.00 56.22 O
ATOM 13 C1' U B2588 74.706 173.710 110.661 1.00 55.24 C
ATOM 14 N1 U B2588 74.529 172.806 111.805 1.00 54.28 N
ATOM 15 C2 U B2588 74.293 173.369 113.051 1.00 56.00 C
ATOM 16 O2 U B2588 74.242 174.579 113.247 1.00 57.06 O
ATOM 17 N3 U B2588 74.119 172.462 114.067 1.00 55.63 N
ATOM 18 C4 U B2588 74.155 171.088 113.970 1.00 54.06 C
ATOM 19 O4 U B2588 73.941 170.407 114.970 1.00 54.35 O
ATOM 20 C5 U B2588 74.413 170.590 112.659 1.00 53.11 C
ATOM 21 C6 U B2588 74.586 171.443 111.648 1.00 52.98 C
ATOM 22 P G B2589 76.631 175.863 107.098 1.00 56.22 P
ATOM 23 OP1 G B2589 76.898 177.284 107.422 1.00 58.48 O
ATOM 24 OP2 G B2589 75.999 175.514 105.796 1.00 55.10 O
ATOM 25 O5' G B2589 78.001 175.069 107.241 1.00 52.87 O
TER

Atoms:
OP1: (75.890,170.207,106.731)
OP2: (76.266,167.669,106.967)
C3': (71.282,170.405,105.579)
C1': (71.369,169.818,103.287)
C5': (72.889,168.462,106.020)
O6: (70.300,166.497,98.405)
O4': (72.626,169.496,103.843)
C8: (70.590,167.502,102.562)
C2: (71.466,169.811,98.955)
C6: (70.646,167.500,99.039)
C5: (70.689,167.685,100.445)
C4: (71.110,168.901,100.942)
P: (75.464,168.807,106.440)
C4': (72.610,169.742,105.272)
C2': (70.387,169.901,104.457)
O2': (69.329,170.798,104.182)
N1: (71.061,168.641,98.359)
N2: (71.831,170.802,98.130)
N3: (71.510,169.997,100.263)
N7: (70.370,166.813,101.478)
N9: (71.037,168.782,102.308)
O5': (73.961,168.667,106.958)
O3': (71.440,171.806,105.503)
C4: (74.155,171.088,113.970)
N3: (74.119,172.462,114.067)
OP1: (69.895,172.348,107.377)
OP2: (71.590,174.096,106.518)
C2: (74.293,173.369,113.051)
C1': (74.706,173.710,110.661)
C3': (75.590,173.899,108.467)
O5': (72.308,172.082,107.837)
O4': (73.633,173.494,109.772)
C5': (73.716,172.316,107.666)
P: (71.238,172.682,106.824)
C4': (74.107,173.572,108.400)
C2': (75.982,173.439,109.870)
O2': (77.042,174.193,110.421)
N1: (74.529,172.806,111.805)
O4: (73.941,170.407,114.970)
O2: (74.242,174.579,113.247)
C6: (74.586,171.443,111.648)
C5: (74.413,170.590,112.659)
O3': (75.752,175.299,108.316)
Image (generated by PyMOL):
PyMOL image
show in jmol