Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1963:A1964
Extra
PDB:
ATOM 1 O3' A A1962 -73.319 -10.256 8.724 1.00 0.01 O
ATOM 2 P A A1963 -73.478 -9.935 10.288 1.00 0.01 P
ATOM 3 OP1 A A1963 -73.871 -11.199 10.970 1.00 0.01 O
ATOM 4 OP2 A A1963 -74.343 -8.784 10.413 1.00 0.01 O
ATOM 5 O5' A A1963 -72.015 -9.527 10.702 1.00 0.01 O
ATOM 6 C5' A A1963 -71.505 -9.916 11.959 1.00 0.01 C
ATOM 7 C4' A A1963 -70.684 -11.156 11.843 1.00 0.01 C
ATOM 8 O4' A A1963 -69.606 -10.897 10.929 1.00 0.01 O
ATOM 9 C3' A A1963 -70.043 -11.614 13.133 1.00 0.01 C
ATOM 10 O3' A A1963 -69.877 -13.036 13.116 1.00 0.01 O
ATOM 11 C2' A A1963 -68.705 -10.920 13.104 1.00 0.01 C
ATOM 12 O2' A A1963 -67.722 -11.580 13.861 1.00 0.01 O
ATOM 13 C1' A A1963 -68.380 -10.912 11.608 1.00 0.01 C
ATOM 14 N9 A A1963 -67.650 -9.744 11.152 1.00 0.12 N
ATOM 15 C8 A A1963 -68.213 -8.656 10.546 1.00 0.12 C
ATOM 16 N7 A A1963 -67.386 -7.726 10.150 1.00 0.12 N
ATOM 17 C5 A A1963 -66.181 -8.267 10.516 1.00 0.12 C
ATOM 18 C6 A A1963 -64.890 -7.764 10.360 1.00 0.12 C
ATOM 19 N6 A A1963 -64.638 -6.567 9.805 1.00 0.12 N
ATOM 20 N1 A A1963 -63.872 -8.534 10.797 1.00 0.12 N
ATOM 21 C2 A A1963 -64.181 -9.719 11.347 1.00 0.12 C
ATOM 22 N3 A A1963 -65.362 -10.307 11.542 1.00 0.12 N
ATOM 23 C4 A A1963 -66.324 -9.512 11.098 1.00 0.12 C
ATOM 24 P U A1964 -71.069 -13.947 13.645 1.00 12.12 P
ATOM 25 OP1 U A1964 -72.054 -13.036 14.239 1.00 12.12 O
ATOM 26 OP2 U A1964 -70.485 -14.981 14.502 1.00 12.12 O
ATOM 27 O5' U A1964 -71.673 -14.600 12.322 1.00 12.12 O
TER
ATOM 1 O3' A B1963 -69.877 -13.036 13.116 1.00 0.01 O
ATOM 2 P U B1964 -71.069 -13.947 13.645 1.00 12.12 P
ATOM 3 OP1 U B1964 -72.054 -13.036 14.239 1.00 12.12 O
ATOM 4 OP2 U B1964 -70.485 -14.981 14.502 1.00 12.12 O
ATOM 5 O5' U B1964 -71.673 -14.600 12.322 1.00 12.12 O
ATOM 6 C5' U B1964 -70.965 -15.603 11.570 1.00 12.12 C
ATOM 7 C4' U B1964 -71.172 -17.016 12.112 1.00 12.12 C
ATOM 8 O4' U B1964 -72.423 -17.106 12.843 1.00 12.12 O
ATOM 9 C3' U B1964 -71.296 -18.147 11.093 1.00 12.12 C
ATOM 10 O3' U B1964 -70.083 -18.549 10.535 1.00 12.12 O
ATOM 11 C2' U B1964 -71.952 -19.239 11.918 1.00 12.12 C
ATOM 12 O2' U B1964 -71.033 -19.827 12.833 1.00 12.12 O
ATOM 13 C1' U B1964 -72.961 -18.421 12.702 1.00 12.12 C
ATOM 14 N1 U B1964 -74.226 -18.335 11.967 1.00 17.50 N
ATOM 15 C2 U B1964 -75.177 -19.331 12.203 1.00 17.50 C
ATOM 16 O2 U B1964 -74.974 -20.235 13.021 1.00 17.50 O
ATOM 17 N3 U B1964 -76.325 -19.139 11.426 1.00 17.50 N
ATOM 18 C4 U B1964 -76.549 -18.093 10.474 1.00 17.50 C
ATOM 19 O4 U B1964 -77.588 -17.967 9.800 1.00 17.50 O
ATOM 20 C5 U B1964 -75.478 -17.155 10.320 1.00 17.50 C
ATOM 21 C6 U B1964 -74.374 -17.315 11.046 1.00 17.50 C
ATOM 22 P G B1965 -69.782 -18.203 9.021 1.00 0.02 P
ATOM 23 OP1 G B1965 -70.920 -18.669 8.223 1.00 0.02 O
ATOM 24 OP2 G B1965 -68.432 -18.737 8.703 1.00 0.02 O
ATOM 25 O5' G B1965 -69.766 -16.624 9.071 1.00 0.02 O
TER
ATOM 2 P A A1963 -73.478 -9.935 10.288 1.00 0.01 P
ATOM 3 OP1 A A1963 -73.871 -11.199 10.970 1.00 0.01 O
ATOM 4 OP2 A A1963 -74.343 -8.784 10.413 1.00 0.01 O
ATOM 5 O5' A A1963 -72.015 -9.527 10.702 1.00 0.01 O
ATOM 6 C5' A A1963 -71.505 -9.916 11.959 1.00 0.01 C
ATOM 7 C4' A A1963 -70.684 -11.156 11.843 1.00 0.01 C
ATOM 8 O4' A A1963 -69.606 -10.897 10.929 1.00 0.01 O
ATOM 9 C3' A A1963 -70.043 -11.614 13.133 1.00 0.01 C
ATOM 10 O3' A A1963 -69.877 -13.036 13.116 1.00 0.01 O
ATOM 11 C2' A A1963 -68.705 -10.920 13.104 1.00 0.01 C
ATOM 12 O2' A A1963 -67.722 -11.580 13.861 1.00 0.01 O
ATOM 13 C1' A A1963 -68.380 -10.912 11.608 1.00 0.01 C
ATOM 14 N9 A A1963 -67.650 -9.744 11.152 1.00 0.12 N
ATOM 15 C8 A A1963 -68.213 -8.656 10.546 1.00 0.12 C
ATOM 16 N7 A A1963 -67.386 -7.726 10.150 1.00 0.12 N
ATOM 17 C5 A A1963 -66.181 -8.267 10.516 1.00 0.12 C
ATOM 18 C6 A A1963 -64.890 -7.764 10.360 1.00 0.12 C
ATOM 19 N6 A A1963 -64.638 -6.567 9.805 1.00 0.12 N
ATOM 20 N1 A A1963 -63.872 -8.534 10.797 1.00 0.12 N
ATOM 21 C2 A A1963 -64.181 -9.719 11.347 1.00 0.12 C
ATOM 22 N3 A A1963 -65.362 -10.307 11.542 1.00 0.12 N
ATOM 23 C4 A A1963 -66.324 -9.512 11.098 1.00 0.12 C
ATOM 24 P U A1964 -71.069 -13.947 13.645 1.00 12.12 P
ATOM 25 OP1 U A1964 -72.054 -13.036 14.239 1.00 12.12 O
ATOM 26 OP2 U A1964 -70.485 -14.981 14.502 1.00 12.12 O
ATOM 27 O5' U A1964 -71.673 -14.600 12.322 1.00 12.12 O
TER
ATOM 1 O3' A B1963 -69.877 -13.036 13.116 1.00 0.01 O
ATOM 2 P U B1964 -71.069 -13.947 13.645 1.00 12.12 P
ATOM 3 OP1 U B1964 -72.054 -13.036 14.239 1.00 12.12 O
ATOM 4 OP2 U B1964 -70.485 -14.981 14.502 1.00 12.12 O
ATOM 5 O5' U B1964 -71.673 -14.600 12.322 1.00 12.12 O
ATOM 6 C5' U B1964 -70.965 -15.603 11.570 1.00 12.12 C
ATOM 7 C4' U B1964 -71.172 -17.016 12.112 1.00 12.12 C
ATOM 8 O4' U B1964 -72.423 -17.106 12.843 1.00 12.12 O
ATOM 9 C3' U B1964 -71.296 -18.147 11.093 1.00 12.12 C
ATOM 10 O3' U B1964 -70.083 -18.549 10.535 1.00 12.12 O
ATOM 11 C2' U B1964 -71.952 -19.239 11.918 1.00 12.12 C
ATOM 12 O2' U B1964 -71.033 -19.827 12.833 1.00 12.12 O
ATOM 13 C1' U B1964 -72.961 -18.421 12.702 1.00 12.12 C
ATOM 14 N1 U B1964 -74.226 -18.335 11.967 1.00 17.50 N
ATOM 15 C2 U B1964 -75.177 -19.331 12.203 1.00 17.50 C
ATOM 16 O2 U B1964 -74.974 -20.235 13.021 1.00 17.50 O
ATOM 17 N3 U B1964 -76.325 -19.139 11.426 1.00 17.50 N
ATOM 18 C4 U B1964 -76.549 -18.093 10.474 1.00 17.50 C
ATOM 19 O4 U B1964 -77.588 -17.967 9.800 1.00 17.50 O
ATOM 20 C5 U B1964 -75.478 -17.155 10.320 1.00 17.50 C
ATOM 21 C6 U B1964 -74.374 -17.315 11.046 1.00 17.50 C
ATOM 22 P G B1965 -69.782 -18.203 9.021 1.00 0.02 P
ATOM 23 OP1 G B1965 -70.920 -18.669 8.223 1.00 0.02 O
ATOM 24 OP2 G B1965 -68.432 -18.737 8.703 1.00 0.02 O
ATOM 25 O5' G B1965 -69.766 -16.624 9.071 1.00 0.02 O
TER
Atoms:
OP1: (-73.871,-11.199,10.970)
OP2: (-74.343,-8.784,10.413)
C3': (-70.043,-11.614,13.133)
C1': (-68.380,-10.912,11.608)
C5': (-71.505,-9.916,11.959)
O4': (-69.606,-10.897,10.929)
C8: (-68.213,-8.656,10.546)
O2': (-67.722,-11.580,13.861)
C6: (-64.890,-7.764,10.360)
C5: (-66.181,-8.267,10.516)
C4: (-66.324,-9.512,11.098)
P: (-73.478,-9.935,10.288)
C4': (-70.684,-11.156,11.843)
C2': (-68.705,-10.920,13.104)
C2: (-64.181,-9.719,11.347)
N1: (-63.872,-8.534,10.797)
N3: (-65.362,-10.307,11.542)
N6: (-64.638,-6.567,9.805)
N7: (-67.386,-7.726,10.150)
N9: (-67.650,-9.744,11.152)
O5': (-72.015,-9.527,10.702)
O3': (-69.877,-13.036,13.116)
OP2: (-74.343,-8.784,10.413)
C3': (-70.043,-11.614,13.133)
C1': (-68.380,-10.912,11.608)
C5': (-71.505,-9.916,11.959)
O4': (-69.606,-10.897,10.929)
C8: (-68.213,-8.656,10.546)
O2': (-67.722,-11.580,13.861)
C6: (-64.890,-7.764,10.360)
C5: (-66.181,-8.267,10.516)
C4: (-66.324,-9.512,11.098)
P: (-73.478,-9.935,10.288)
C4': (-70.684,-11.156,11.843)
C2': (-68.705,-10.920,13.104)
C2: (-64.181,-9.719,11.347)
N1: (-63.872,-8.534,10.797)
N3: (-65.362,-10.307,11.542)
N6: (-64.638,-6.567,9.805)
N7: (-67.386,-7.726,10.150)
N9: (-67.650,-9.744,11.152)
O5': (-72.015,-9.527,10.702)
O3': (-69.877,-13.036,13.116)
C4: (-76.549,-18.093,10.474)
N3: (-76.325,-19.139,11.426)
OP1: (-72.054,-13.036,14.239)
OP2: (-70.485,-14.981,14.502)
C2: (-75.177,-19.331,12.203)
C1': (-72.961,-18.421,12.702)
C3': (-71.296,-18.147,11.093)
O5': (-71.673,-14.600,12.322)
O4': (-72.423,-17.106,12.843)
C5': (-70.965,-15.603,11.570)
P: (-71.069,-13.947,13.645)
C4': (-71.172,-17.016,12.112)
C2': (-71.952,-19.239,11.918)
O2': (-71.033,-19.827,12.833)
N1: (-74.226,-18.335,11.967)
O4: (-77.588,-17.967,9.800)
O2: (-74.974,-20.235,13.021)
C6: (-74.374,-17.315,11.046)
C5: (-75.478,-17.155,10.320)
O3': (-70.083,-18.549,10.535)
N3: (-76.325,-19.139,11.426)
OP1: (-72.054,-13.036,14.239)
OP2: (-70.485,-14.981,14.502)
C2: (-75.177,-19.331,12.203)
C1': (-72.961,-18.421,12.702)
C3': (-71.296,-18.147,11.093)
O5': (-71.673,-14.600,12.322)
O4': (-72.423,-17.106,12.843)
C5': (-70.965,-15.603,11.570)
P: (-71.069,-13.947,13.645)
C4': (-71.172,-17.016,12.112)
C2': (-71.952,-19.239,11.918)
O2': (-71.033,-19.827,12.833)
N1: (-74.226,-18.335,11.967)
O4: (-77.588,-17.967,9.800)
O2: (-74.974,-20.235,13.021)
C6: (-74.374,-17.315,11.046)
C5: (-75.478,-17.155,10.320)
O3': (-70.083,-18.549,10.535)
Image (generated by PyMOL):