ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1K9M:A678:A719

Extra

PDB:
ATOM 1 O3' G A 677 52.407 70.784 48.219 1.00 51.37 O
ATOM 2 P G A 678 53.702 71.494 48.859 1.00 49.52 P
ATOM 3 OP1 G A 678 53.407 71.757 50.296 1.00 49.69 O
ATOM 4 OP2 G A 678 54.072 72.611 47.971 1.00 49.89 O
ATOM 5 O5' G A 678 54.842 70.395 48.747 1.00 47.78 O
ATOM 6 C5' G A 678 54.613 69.058 49.195 1.00 46.81 C
ATOM 7 C4' G A 678 55.744 68.170 48.745 1.00 46.53 C
ATOM 8 O4' G A 678 55.601 67.887 47.333 1.00 47.20 O
ATOM 9 C3' G A 678 57.157 68.725 48.846 1.00 46.41 C
ATOM 10 O3' G A 678 57.714 68.652 50.155 1.00 46.48 O
ATOM 11 C2' G A 678 57.911 67.817 47.893 1.00 45.93 C
ATOM 12 O2' G A 678 58.204 66.583 48.514 1.00 46.33 O
ATOM 13 C1' G A 678 56.877 67.616 46.782 1.00 46.50 C
ATOM 14 N9 G A 678 57.108 68.465 45.610 1.00 47.24 N
ATOM 15 C8 G A 678 56.539 69.687 45.320 1.00 47.33 C
ATOM 16 N7 G A 678 56.988 70.212 44.207 1.00 48.14 N
ATOM 17 C5 G A 678 57.907 69.277 43.732 1.00 47.28 C
ATOM 18 C6 G A 678 58.734 69.281 42.560 1.00 47.70 C
ATOM 19 O6 G A 678 58.828 70.144 41.672 1.00 49.40 O
ATOM 20 N1 G A 678 59.507 68.128 42.484 1.00 47.37 N
ATOM 21 C2 G A 678 59.497 67.109 43.395 1.00 47.10 C
ATOM 22 N2 G A 678 60.340 66.095 43.166 1.00 48.25 N
ATOM 23 N3 G A 678 58.732 67.082 44.461 1.00 47.84 N
ATOM 24 C4 G A 678 57.977 68.190 44.576 1.00 47.33 C
ATOM 25 P G A 679 58.807 69.749 50.615 1.00 46.37 P
ATOM 26 OP1 G A 679 59.216 69.438 52.006 1.00 45.39 O
ATOM 27 OP2 G A 679 58.271 71.098 50.289 1.00 46.53 O
ATOM 28 O5' G A 679 60.066 69.468 49.685 1.00 47.35 O
TER

ATOM 1 O3' U B 718 59.554 63.261 44.414 1.00 56.92 O
ATOM 2 P C B 719 60.934 62.592 44.903 1.00 60.14 P
ATOM 3 OP1 C B 719 61.993 62.993 43.947 1.00 59.67 O
ATOM 4 OP2 C B 719 60.680 61.147 45.165 1.00 60.95 O
ATOM 5 O5' C B 719 61.241 63.286 46.300 1.00 59.94 O
ATOM 6 C5' C B 719 61.700 64.654 46.374 1.00 58.94 C
ATOM 7 C4' C B 719 62.146 64.953 47.784 1.00 57.85 C
ATOM 8 O4' C B 719 60.993 64.939 48.670 1.00 56.64 O
ATOM 9 C3' C B 719 63.066 63.893 48.374 1.00 58.17 C
ATOM 10 O3' C B 719 64.403 64.080 47.966 1.00 59.30 O
ATOM 11 C2' C B 719 62.862 64.075 49.865 1.00 56.53 C
ATOM 12 O2' C B 719 63.558 65.196 50.358 1.00 56.51 O
ATOM 13 C1' C B 719 61.364 64.367 49.913 1.00 56.26 C
ATOM 14 N1 C B 719 60.542 63.171 50.152 1.00 55.43 N
ATOM 15 C2 C B 719 60.107 62.928 51.446 1.00 55.32 C
ATOM 16 O2 C B 719 60.468 63.691 52.345 1.00 55.87 O
ATOM 17 N3 C B 719 59.309 61.867 51.694 1.00 54.40 N
ATOM 18 C4 C B 719 58.953 61.056 50.699 1.00 54.51 C
ATOM 19 N4 C B 719 58.140 60.034 50.981 1.00 54.54 N
ATOM 20 C5 C B 719 59.409 61.260 49.365 1.00 55.59 C
ATOM 21 C6 C B 719 60.196 62.321 49.138 1.00 55.18 C
ATOM 22 P U B 720 65.407 62.829 47.958 1.00 61.62 P
ATOM 23 OP1 U B 720 66.731 63.320 47.513 1.00 62.60 O
ATOM 24 OP2 U B 720 64.764 61.681 47.246 1.00 61.64 O
ATOM 25 O5' U B 720 65.574 62.471 49.495 1.00 62.01 O
TER

Atoms:
OP1: (53.407,71.757,50.296)
OP2: (54.072,72.611,47.971)
C3': (57.157,68.725,48.846)
C1': (56.877,67.616,46.782)
C5': (54.613,69.058,49.195)
O6: (58.828,70.144,41.672)
O4': (55.601,67.887,47.333)
C8: (56.539,69.687,45.320)
C2: (59.497,67.109,43.395)
C6: (58.734,69.281,42.560)
C5: (57.907,69.277,43.732)
C4: (57.977,68.190,44.576)
P: (53.702,71.494,48.859)
C4': (55.744,68.170,48.745)
C2': (57.911,67.817,47.893)
O2': (58.204,66.583,48.514)
N1: (59.507,68.128,42.484)
N2: (60.340,66.095,43.166)
N3: (58.732,67.082,44.461)
N7: (56.988,70.212,44.207)
N9: (57.108,68.465,45.610)
O5': (54.842,70.395,48.747)
O3': (57.714,68.652,50.155)
C2: (60.107,62.928,51.446)
OP1: (61.993,62.993,43.947)
OP2: (60.680,61.147,45.165)
C4: (58.953,61.056,50.699)
O5': (61.241,63.286,46.300)
C3': (63.066,63.893,48.374)
C1': (61.364,64.367,49.913)
O4': (60.993,64.939,48.670)
C5': (61.700,64.654,46.374)
P: (60.934,62.592,44.903)
O2: (60.468,63.691,52.345)
C4': (62.146,64.953,47.784)
C2': (62.862,64.075,49.865)
O2': (63.558,65.196,50.358)
N1: (60.542,63.171,50.152)
N3: (59.309,61.867,51.694)
N4: (58.140,60.034,50.981)
C6: (60.196,62.321,49.138)
C5: (59.409,61.260,49.365)
O3': (64.403,64.080,47.966)
Image (generated by PyMOL):
PyMOL image
show in jmol