Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A649:A734
Extra
PDB:
ATOM 1 O3' A A 648 36.787 77.021 34.663 1.00 48.01 O
ATOM 2 P G A 649 36.157 77.675 33.344 1.00 47.43 P
ATOM 3 OP1 G A 649 35.377 76.612 32.659 1.00 48.40 O
ATOM 4 OP2 G A 649 37.254 78.360 32.628 1.00 47.84 O
ATOM 5 O5' G A 649 35.130 78.754 33.900 1.00 45.81 O
ATOM 6 C5' G A 649 35.514 80.126 34.052 1.00 45.77 C
ATOM 7 C4' G A 649 35.671 80.473 35.513 1.00 44.61 C
ATOM 8 O4' G A 649 36.878 79.872 36.063 1.00 43.65 O
ATOM 9 C3' G A 649 35.857 81.954 35.738 1.00 42.79 C
ATOM 10 O3' G A 649 34.583 82.546 35.784 1.00 43.16 O
ATOM 11 C2' G A 649 36.550 81.964 37.078 1.00 43.62 C
ATOM 12 O2' G A 649 35.604 81.602 38.061 1.00 45.22 O
ATOM 13 C1' G A 649 37.532 80.806 36.891 1.00 43.28 C
ATOM 14 N9 G A 649 38.759 81.229 36.214 1.00 45.10 N
ATOM 15 C8 G A 649 39.159 80.956 34.926 1.00 45.67 C
ATOM 16 N7 G A 649 40.320 81.475 34.626 1.00 45.10 N
ATOM 17 C5 G A 649 40.707 82.130 35.786 1.00 46.20 C
ATOM 18 C6 G A 649 41.886 82.877 36.092 1.00 46.94 C
ATOM 19 O6 G A 649 42.861 83.124 35.374 1.00 46.58 O
ATOM 20 N1 G A 649 41.851 83.365 37.394 1.00 47.44 N
ATOM 21 C2 G A 649 40.820 83.178 38.287 1.00 47.35 C
ATOM 22 N2 G A 649 40.941 83.769 39.502 1.00 47.83 N
ATOM 23 N3 G A 649 39.741 82.480 38.018 1.00 47.24 N
ATOM 24 C4 G A 649 39.748 81.992 36.767 1.00 46.08 C
ATOM 25 P U A 650 34.313 83.905 34.988 1.00 43.52 P
ATOM 26 OP1 U A 650 32.854 84.116 34.919 1.00 43.96 O
ATOM 27 OP2 U A 650 35.108 83.820 33.730 1.00 43.15 O
ATOM 28 O5' U A 650 34.946 85.031 35.917 1.00 45.59 O
TER
ATOM 1 O3' A B 733 37.506 79.395 47.382 1.00 42.02 O
ATOM 2 P G B 734 38.537 80.103 48.405 1.00 39.01 P
ATOM 3 OP1 G B 734 39.408 79.094 49.035 1.00 35.96 O
ATOM 4 OP2 G B 734 37.757 81.023 49.244 1.00 37.43 O
ATOM 5 O5' G B 734 39.437 80.998 47.444 1.00 38.83 O
ATOM 6 C5' G B 734 40.340 80.383 46.510 1.00 40.64 C
ATOM 7 C4' G B 734 40.015 80.790 45.088 1.00 42.47 C
ATOM 8 O4' G B 734 38.643 80.456 44.744 1.00 42.98 O
ATOM 9 C3' G B 734 40.063 82.267 44.784 1.00 43.15 C
ATOM 10 O3' G B 734 41.395 82.728 44.708 1.00 43.07 O
ATOM 11 C2' G B 734 39.292 82.345 43.469 1.00 43.29 C
ATOM 12 O2' G B 734 39.981 81.884 42.316 1.00 44.14 O
ATOM 13 C1' G B 734 38.171 81.351 43.743 1.00 41.92 C
ATOM 14 N9 G B 734 36.983 82.017 44.249 1.00 39.90 N
ATOM 15 C8 G B 734 36.554 82.052 45.549 1.00 40.73 C
ATOM 16 N7 G B 734 35.426 82.690 45.697 1.00 39.87 N
ATOM 17 C5 G B 734 35.100 83.116 44.420 1.00 38.18 C
ATOM 18 C6 G B 734 33.980 83.848 43.966 1.00 37.77 C
ATOM 19 O6 G B 734 33.037 84.281 44.630 1.00 37.90 O
ATOM 20 N1 G B 734 34.022 84.061 42.592 1.00 37.00 N
ATOM 21 C2 G B 734 35.017 83.618 41.761 1.00 37.72 C
ATOM 22 N2 G B 734 34.859 83.888 40.452 1.00 37.46 N
ATOM 23 N3 G B 734 36.086 82.944 42.179 1.00 37.51 N
ATOM 24 C4 G B 734 36.055 82.723 43.514 1.00 38.67 C
ATOM 25 P C B 735 41.767 84.152 45.335 1.00 43.26 P
ATOM 26 OP1 C B 735 43.243 84.145 45.497 1.00 41.45 O
ATOM 27 OP2 C B 735 40.902 84.404 46.514 1.00 39.55 O
ATOM 28 O5' C B 735 41.310 85.180 44.208 1.00 41.45 O
TER
ATOM 2 P G A 649 36.157 77.675 33.344 1.00 47.43 P
ATOM 3 OP1 G A 649 35.377 76.612 32.659 1.00 48.40 O
ATOM 4 OP2 G A 649 37.254 78.360 32.628 1.00 47.84 O
ATOM 5 O5' G A 649 35.130 78.754 33.900 1.00 45.81 O
ATOM 6 C5' G A 649 35.514 80.126 34.052 1.00 45.77 C
ATOM 7 C4' G A 649 35.671 80.473 35.513 1.00 44.61 C
ATOM 8 O4' G A 649 36.878 79.872 36.063 1.00 43.65 O
ATOM 9 C3' G A 649 35.857 81.954 35.738 1.00 42.79 C
ATOM 10 O3' G A 649 34.583 82.546 35.784 1.00 43.16 O
ATOM 11 C2' G A 649 36.550 81.964 37.078 1.00 43.62 C
ATOM 12 O2' G A 649 35.604 81.602 38.061 1.00 45.22 O
ATOM 13 C1' G A 649 37.532 80.806 36.891 1.00 43.28 C
ATOM 14 N9 G A 649 38.759 81.229 36.214 1.00 45.10 N
ATOM 15 C8 G A 649 39.159 80.956 34.926 1.00 45.67 C
ATOM 16 N7 G A 649 40.320 81.475 34.626 1.00 45.10 N
ATOM 17 C5 G A 649 40.707 82.130 35.786 1.00 46.20 C
ATOM 18 C6 G A 649 41.886 82.877 36.092 1.00 46.94 C
ATOM 19 O6 G A 649 42.861 83.124 35.374 1.00 46.58 O
ATOM 20 N1 G A 649 41.851 83.365 37.394 1.00 47.44 N
ATOM 21 C2 G A 649 40.820 83.178 38.287 1.00 47.35 C
ATOM 22 N2 G A 649 40.941 83.769 39.502 1.00 47.83 N
ATOM 23 N3 G A 649 39.741 82.480 38.018 1.00 47.24 N
ATOM 24 C4 G A 649 39.748 81.992 36.767 1.00 46.08 C
ATOM 25 P U A 650 34.313 83.905 34.988 1.00 43.52 P
ATOM 26 OP1 U A 650 32.854 84.116 34.919 1.00 43.96 O
ATOM 27 OP2 U A 650 35.108 83.820 33.730 1.00 43.15 O
ATOM 28 O5' U A 650 34.946 85.031 35.917 1.00 45.59 O
TER
ATOM 1 O3' A B 733 37.506 79.395 47.382 1.00 42.02 O
ATOM 2 P G B 734 38.537 80.103 48.405 1.00 39.01 P
ATOM 3 OP1 G B 734 39.408 79.094 49.035 1.00 35.96 O
ATOM 4 OP2 G B 734 37.757 81.023 49.244 1.00 37.43 O
ATOM 5 O5' G B 734 39.437 80.998 47.444 1.00 38.83 O
ATOM 6 C5' G B 734 40.340 80.383 46.510 1.00 40.64 C
ATOM 7 C4' G B 734 40.015 80.790 45.088 1.00 42.47 C
ATOM 8 O4' G B 734 38.643 80.456 44.744 1.00 42.98 O
ATOM 9 C3' G B 734 40.063 82.267 44.784 1.00 43.15 C
ATOM 10 O3' G B 734 41.395 82.728 44.708 1.00 43.07 O
ATOM 11 C2' G B 734 39.292 82.345 43.469 1.00 43.29 C
ATOM 12 O2' G B 734 39.981 81.884 42.316 1.00 44.14 O
ATOM 13 C1' G B 734 38.171 81.351 43.743 1.00 41.92 C
ATOM 14 N9 G B 734 36.983 82.017 44.249 1.00 39.90 N
ATOM 15 C8 G B 734 36.554 82.052 45.549 1.00 40.73 C
ATOM 16 N7 G B 734 35.426 82.690 45.697 1.00 39.87 N
ATOM 17 C5 G B 734 35.100 83.116 44.420 1.00 38.18 C
ATOM 18 C6 G B 734 33.980 83.848 43.966 1.00 37.77 C
ATOM 19 O6 G B 734 33.037 84.281 44.630 1.00 37.90 O
ATOM 20 N1 G B 734 34.022 84.061 42.592 1.00 37.00 N
ATOM 21 C2 G B 734 35.017 83.618 41.761 1.00 37.72 C
ATOM 22 N2 G B 734 34.859 83.888 40.452 1.00 37.46 N
ATOM 23 N3 G B 734 36.086 82.944 42.179 1.00 37.51 N
ATOM 24 C4 G B 734 36.055 82.723 43.514 1.00 38.67 C
ATOM 25 P C B 735 41.767 84.152 45.335 1.00 43.26 P
ATOM 26 OP1 C B 735 43.243 84.145 45.497 1.00 41.45 O
ATOM 27 OP2 C B 735 40.902 84.404 46.514 1.00 39.55 O
ATOM 28 O5' C B 735 41.310 85.180 44.208 1.00 41.45 O
TER
Atoms:
OP1: (35.377,76.612,32.659)
OP2: (37.254,78.360,32.628)
C3': (35.857,81.954,35.738)
C1': (37.532,80.806,36.891)
C5': (35.514,80.126,34.052)
O6: (42.861,83.124,35.374)
O4': (36.878,79.872,36.063)
C8: (39.159,80.956,34.926)
C2: (40.820,83.178,38.287)
C6: (41.886,82.877,36.092)
C5: (40.707,82.130,35.786)
C4: (39.748,81.992,36.767)
P: (36.157,77.675,33.344)
C4': (35.671,80.473,35.513)
C2': (36.550,81.964,37.078)
O2': (35.604,81.602,38.061)
N1: (41.851,83.365,37.394)
N2: (40.941,83.769,39.502)
N3: (39.741,82.480,38.018)
N7: (40.320,81.475,34.626)
N9: (38.759,81.229,36.214)
O5': (35.130,78.754,33.900)
O3': (34.583,82.546,35.784)
OP2: (37.254,78.360,32.628)
C3': (35.857,81.954,35.738)
C1': (37.532,80.806,36.891)
C5': (35.514,80.126,34.052)
O6: (42.861,83.124,35.374)
O4': (36.878,79.872,36.063)
C8: (39.159,80.956,34.926)
C2: (40.820,83.178,38.287)
C6: (41.886,82.877,36.092)
C5: (40.707,82.130,35.786)
C4: (39.748,81.992,36.767)
P: (36.157,77.675,33.344)
C4': (35.671,80.473,35.513)
C2': (36.550,81.964,37.078)
O2': (35.604,81.602,38.061)
N1: (41.851,83.365,37.394)
N2: (40.941,83.769,39.502)
N3: (39.741,82.480,38.018)
N7: (40.320,81.475,34.626)
N9: (38.759,81.229,36.214)
O5': (35.130,78.754,33.900)
O3': (34.583,82.546,35.784)
OP1: (39.408,79.094,49.035)
OP2: (37.757,81.023,49.244)
C3': (40.063,82.267,44.784)
C1': (38.171,81.351,43.743)
C5': (40.340,80.383,46.510)
O6: (33.037,84.281,44.630)
O4': (38.643,80.456,44.744)
C8: (36.554,82.052,45.549)
C2: (35.017,83.618,41.761)
C6: (33.980,83.848,43.966)
C5: (35.100,83.116,44.420)
C4: (36.055,82.723,43.514)
P: (38.537,80.103,48.405)
C4': (40.015,80.790,45.088)
C2': (39.292,82.345,43.469)
O2': (39.981,81.884,42.316)
N1: (34.022,84.061,42.592)
N2: (34.859,83.888,40.452)
N3: (36.086,82.944,42.179)
N7: (35.426,82.690,45.697)
N9: (36.983,82.017,44.249)
O5': (39.437,80.998,47.444)
O3': (41.395,82.728,44.708)
OP2: (37.757,81.023,49.244)
C3': (40.063,82.267,44.784)
C1': (38.171,81.351,43.743)
C5': (40.340,80.383,46.510)
O6: (33.037,84.281,44.630)
O4': (38.643,80.456,44.744)
C8: (36.554,82.052,45.549)
C2: (35.017,83.618,41.761)
C6: (33.980,83.848,43.966)
C5: (35.100,83.116,44.420)
C4: (36.055,82.723,43.514)
P: (38.537,80.103,48.405)
C4': (40.015,80.790,45.088)
C2': (39.292,82.345,43.469)
O2': (39.981,81.884,42.316)
N1: (34.022,84.061,42.592)
N2: (34.859,83.888,40.452)
N3: (36.086,82.944,42.179)
N7: (35.426,82.690,45.697)
N9: (36.983,82.017,44.249)
O5': (39.437,80.998,47.444)
O3': (41.395,82.728,44.708)
Image (generated by PyMOL):