Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A470:A471
Extra
PDB:
ATOM 1 O3' U A 469 24.754 148.940 56.386 1.00 42.72 O
ATOM 2 P G A 470 24.054 148.014 55.301 1.00 44.33 P
ATOM 3 OP1 G A 470 23.182 147.070 56.027 1.00 42.87 O
ATOM 4 OP2 G A 470 25.105 147.496 54.374 1.00 42.76 O
ATOM 5 O5' G A 470 23.159 149.065 54.513 1.00 45.93 O
ATOM 6 C5' G A 470 22.035 149.673 55.150 1.00 47.90 C
ATOM 7 C4' G A 470 21.432 150.721 54.261 1.00 49.46 C
ATOM 8 O4' G A 470 22.372 151.806 54.098 1.00 49.92 O
ATOM 9 C3' G A 470 21.168 150.293 52.827 1.00 49.72 C
ATOM 10 O3' G A 470 20.019 149.485 52.676 1.00 48.77 O
ATOM 11 C2' G A 470 21.038 151.633 52.133 1.00 50.42 C
ATOM 12 O2' G A 470 19.805 152.296 52.345 1.00 52.80 O
ATOM 13 C1' G A 470 22.143 152.411 52.840 1.00 52.06 C
ATOM 14 N9 G A 470 23.349 152.345 52.029 1.00 54.30 N
ATOM 15 C8 G A 470 24.327 151.379 51.980 1.00 53.17 C
ATOM 16 N7 G A 470 25.241 151.629 51.083 1.00 53.88 N
ATOM 17 C5 G A 470 24.848 152.837 50.526 1.00 55.75 C
ATOM 18 C6 G A 470 25.437 153.621 49.512 1.00 56.71 C
ATOM 19 O6 G A 470 26.460 153.394 48.860 1.00 57.37 O
ATOM 20 N1 G A 470 24.703 154.785 49.276 1.00 58.12 N
ATOM 21 C2 G A 470 23.544 155.138 49.926 1.00 58.81 C
ATOM 22 N2 G A 470 22.988 156.300 49.599 1.00 58.87 N
ATOM 23 N3 G A 470 22.978 154.405 50.846 1.00 58.69 N
ATOM 24 C4 G A 470 23.684 153.283 51.104 1.00 56.47 C
ATOM 25 P C A 471 20.037 148.275 51.613 1.00 50.51 P
ATOM 26 OP1 C A 471 18.952 147.394 52.121 1.00 50.12 O
ATOM 27 OP2 C A 471 21.420 147.724 51.465 1.00 48.35 O
ATOM 28 O5' C A 471 19.605 148.994 50.251 1.00 51.32 O
TER
ATOM 1 O3' G B 470 20.019 149.485 52.676 1.00 48.77 O
ATOM 2 P C B 471 20.037 148.275 51.613 1.00 50.51 P
ATOM 3 OP1 C B 471 18.952 147.394 52.121 1.00 50.12 O
ATOM 4 OP2 C B 471 21.420 147.724 51.465 1.00 48.35 O
ATOM 5 O5' C B 471 19.605 148.994 50.251 1.00 51.32 O
ATOM 6 C5' C B 471 19.573 148.306 48.972 1.00 50.54 C
ATOM 7 C4' C B 471 19.091 149.255 47.886 1.00 50.09 C
ATOM 8 O4' C B 471 17.736 149.675 48.168 1.00 50.92 O
ATOM 9 C3' C B 471 19.871 150.555 47.789 1.00 49.98 C
ATOM 10 O3' C B 471 21.024 150.380 46.979 1.00 49.68 O
ATOM 11 C2' C B 471 18.875 151.527 47.170 1.00 50.24 C
ATOM 12 O2' C B 471 18.816 151.467 45.761 1.00 50.26 O
ATOM 13 C1' C B 471 17.553 151.011 47.735 1.00 51.45 C
ATOM 14 N1 C B 471 16.931 151.805 48.818 1.00 53.22 N
ATOM 15 C2 C B 471 16.245 152.983 48.480 1.00 54.39 C
ATOM 16 O2 C B 471 16.258 153.366 47.300 1.00 57.11 O
ATOM 17 N3 C B 471 15.592 153.676 49.440 1.00 53.48 N
ATOM 18 C4 C B 471 15.614 153.243 50.699 1.00 54.08 C
ATOM 19 N4 C B 471 14.929 153.932 51.607 1.00 54.89 N
ATOM 20 C5 C B 471 16.340 152.074 51.083 1.00 54.76 C
ATOM 21 C6 C B 471 16.985 151.396 50.119 1.00 53.75 C
ATOM 22 P A B 472 22.353 151.195 47.323 1.00 48.69 P
ATOM 23 OP1 A B 472 23.459 150.801 46.401 1.00 49.75 O
ATOM 24 OP2 A B 472 22.511 151.017 48.774 1.00 49.54 O
ATOM 25 O5' A B 472 21.964 152.703 46.997 1.00 48.61 O
TER
ATOM 2 P G A 470 24.054 148.014 55.301 1.00 44.33 P
ATOM 3 OP1 G A 470 23.182 147.070 56.027 1.00 42.87 O
ATOM 4 OP2 G A 470 25.105 147.496 54.374 1.00 42.76 O
ATOM 5 O5' G A 470 23.159 149.065 54.513 1.00 45.93 O
ATOM 6 C5' G A 470 22.035 149.673 55.150 1.00 47.90 C
ATOM 7 C4' G A 470 21.432 150.721 54.261 1.00 49.46 C
ATOM 8 O4' G A 470 22.372 151.806 54.098 1.00 49.92 O
ATOM 9 C3' G A 470 21.168 150.293 52.827 1.00 49.72 C
ATOM 10 O3' G A 470 20.019 149.485 52.676 1.00 48.77 O
ATOM 11 C2' G A 470 21.038 151.633 52.133 1.00 50.42 C
ATOM 12 O2' G A 470 19.805 152.296 52.345 1.00 52.80 O
ATOM 13 C1' G A 470 22.143 152.411 52.840 1.00 52.06 C
ATOM 14 N9 G A 470 23.349 152.345 52.029 1.00 54.30 N
ATOM 15 C8 G A 470 24.327 151.379 51.980 1.00 53.17 C
ATOM 16 N7 G A 470 25.241 151.629 51.083 1.00 53.88 N
ATOM 17 C5 G A 470 24.848 152.837 50.526 1.00 55.75 C
ATOM 18 C6 G A 470 25.437 153.621 49.512 1.00 56.71 C
ATOM 19 O6 G A 470 26.460 153.394 48.860 1.00 57.37 O
ATOM 20 N1 G A 470 24.703 154.785 49.276 1.00 58.12 N
ATOM 21 C2 G A 470 23.544 155.138 49.926 1.00 58.81 C
ATOM 22 N2 G A 470 22.988 156.300 49.599 1.00 58.87 N
ATOM 23 N3 G A 470 22.978 154.405 50.846 1.00 58.69 N
ATOM 24 C4 G A 470 23.684 153.283 51.104 1.00 56.47 C
ATOM 25 P C A 471 20.037 148.275 51.613 1.00 50.51 P
ATOM 26 OP1 C A 471 18.952 147.394 52.121 1.00 50.12 O
ATOM 27 OP2 C A 471 21.420 147.724 51.465 1.00 48.35 O
ATOM 28 O5' C A 471 19.605 148.994 50.251 1.00 51.32 O
TER
ATOM 1 O3' G B 470 20.019 149.485 52.676 1.00 48.77 O
ATOM 2 P C B 471 20.037 148.275 51.613 1.00 50.51 P
ATOM 3 OP1 C B 471 18.952 147.394 52.121 1.00 50.12 O
ATOM 4 OP2 C B 471 21.420 147.724 51.465 1.00 48.35 O
ATOM 5 O5' C B 471 19.605 148.994 50.251 1.00 51.32 O
ATOM 6 C5' C B 471 19.573 148.306 48.972 1.00 50.54 C
ATOM 7 C4' C B 471 19.091 149.255 47.886 1.00 50.09 C
ATOM 8 O4' C B 471 17.736 149.675 48.168 1.00 50.92 O
ATOM 9 C3' C B 471 19.871 150.555 47.789 1.00 49.98 C
ATOM 10 O3' C B 471 21.024 150.380 46.979 1.00 49.68 O
ATOM 11 C2' C B 471 18.875 151.527 47.170 1.00 50.24 C
ATOM 12 O2' C B 471 18.816 151.467 45.761 1.00 50.26 O
ATOM 13 C1' C B 471 17.553 151.011 47.735 1.00 51.45 C
ATOM 14 N1 C B 471 16.931 151.805 48.818 1.00 53.22 N
ATOM 15 C2 C B 471 16.245 152.983 48.480 1.00 54.39 C
ATOM 16 O2 C B 471 16.258 153.366 47.300 1.00 57.11 O
ATOM 17 N3 C B 471 15.592 153.676 49.440 1.00 53.48 N
ATOM 18 C4 C B 471 15.614 153.243 50.699 1.00 54.08 C
ATOM 19 N4 C B 471 14.929 153.932 51.607 1.00 54.89 N
ATOM 20 C5 C B 471 16.340 152.074 51.083 1.00 54.76 C
ATOM 21 C6 C B 471 16.985 151.396 50.119 1.00 53.75 C
ATOM 22 P A B 472 22.353 151.195 47.323 1.00 48.69 P
ATOM 23 OP1 A B 472 23.459 150.801 46.401 1.00 49.75 O
ATOM 24 OP2 A B 472 22.511 151.017 48.774 1.00 49.54 O
ATOM 25 O5' A B 472 21.964 152.703 46.997 1.00 48.61 O
TER
Atoms:
OP1: (23.182,147.070,56.027)
OP2: (25.105,147.496,54.374)
C3': (21.168,150.293,52.827)
C1': (22.143,152.411,52.840)
C5': (22.035,149.673,55.150)
O6: (26.460,153.394,48.860)
O4': (22.372,151.806,54.098)
C8: (24.327,151.379,51.980)
C2: (23.544,155.138,49.926)
C6: (25.437,153.621,49.512)
C5: (24.848,152.837,50.526)
C4: (23.684,153.283,51.104)
P: (24.054,148.014,55.301)
C4': (21.432,150.721,54.261)
C2': (21.038,151.633,52.133)
O2': (19.805,152.296,52.345)
N1: (24.703,154.785,49.276)
N2: (22.988,156.300,49.599)
N3: (22.978,154.405,50.846)
N7: (25.241,151.629,51.083)
N9: (23.349,152.345,52.029)
O5': (23.159,149.065,54.513)
O3': (20.019,149.485,52.676)
OP2: (25.105,147.496,54.374)
C3': (21.168,150.293,52.827)
C1': (22.143,152.411,52.840)
C5': (22.035,149.673,55.150)
O6: (26.460,153.394,48.860)
O4': (22.372,151.806,54.098)
C8: (24.327,151.379,51.980)
C2: (23.544,155.138,49.926)
C6: (25.437,153.621,49.512)
C5: (24.848,152.837,50.526)
C4: (23.684,153.283,51.104)
P: (24.054,148.014,55.301)
C4': (21.432,150.721,54.261)
C2': (21.038,151.633,52.133)
O2': (19.805,152.296,52.345)
N1: (24.703,154.785,49.276)
N2: (22.988,156.300,49.599)
N3: (22.978,154.405,50.846)
N7: (25.241,151.629,51.083)
N9: (23.349,152.345,52.029)
O5': (23.159,149.065,54.513)
O3': (20.019,149.485,52.676)
C2: (16.245,152.983,48.480)
OP1: (18.952,147.394,52.121)
OP2: (21.420,147.724,51.465)
C4: (15.614,153.243,50.699)
O5': (19.605,148.994,50.251)
C3': (19.871,150.555,47.789)
C1': (17.553,151.011,47.735)
O4': (17.736,149.675,48.168)
C5': (19.573,148.306,48.972)
P: (20.037,148.275,51.613)
O2: (16.258,153.366,47.300)
C4': (19.091,149.255,47.886)
C2': (18.875,151.527,47.170)
O2': (18.816,151.467,45.761)
N1: (16.931,151.805,48.818)
N3: (15.592,153.676,49.440)
N4: (14.929,153.932,51.607)
C6: (16.985,151.396,50.119)
C5: (16.340,152.074,51.083)
O3': (21.024,150.380,46.979)
OP1: (18.952,147.394,52.121)
OP2: (21.420,147.724,51.465)
C4: (15.614,153.243,50.699)
O5': (19.605,148.994,50.251)
C3': (19.871,150.555,47.789)
C1': (17.553,151.011,47.735)
O4': (17.736,149.675,48.168)
C5': (19.573,148.306,48.972)
P: (20.037,148.275,51.613)
O2: (16.258,153.366,47.300)
C4': (19.091,149.255,47.886)
C2': (18.875,151.527,47.170)
O2': (18.816,151.467,45.761)
N1: (16.931,151.805,48.818)
N3: (15.592,153.676,49.440)
N4: (14.929,153.932,51.607)
C6: (16.985,151.396,50.119)
C5: (16.340,152.074,51.083)
O3': (21.024,150.380,46.979)
Image (generated by PyMOL):