Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2XLJ:B5:B6
Extra
PDB:
ATOM 1 O3' C A 4 -18.333 -3.505 -51.784 1.00 87.82 O
ATOM 2 P G A 5 -18.960 -4.004 -53.173 1.00 90.85 P
ATOM 3 OP1 G A 5 -17.793 -4.117 -54.082 1.00 96.62 O
ATOM 4 OP2 G A 5 -20.060 -3.067 -53.511 1.00 91.34 O
ATOM 5 O5' G A 5 -19.561 -5.444 -52.856 1.00 75.89 O
ATOM 6 C5' G A 5 -18.717 -6.564 -52.637 1.00 94.18 C
ATOM 7 C4' G A 5 -19.467 -7.703 -51.992 1.00 95.15 C
ATOM 8 O4' G A 5 -20.011 -7.273 -50.717 1.00 96.94 O
ATOM 9 C3' G A 5 -20.679 -8.216 -52.752 1.00 97.06 C
ATOM 10 O3' G A 5 -20.336 -9.092 -53.810 1.00 97.80 O
ATOM 11 C2' G A 5 -21.502 -8.867 -51.648 1.00 96.62 C
ATOM 12 O2' G A 5 -20.949 -10.123 -51.282 1.00 91.49 O
ATOM 13 C1' G A 5 -21.265 -7.885 -50.502 1.00 98.73 C
ATOM 14 N9 G A 5 -22.295 -6.831 -50.468 1.00101.67 N
ATOM 15 C8 G A 5 -22.190 -5.530 -50.902 1.00101.80 C
ATOM 16 N7 G A 5 -23.289 -4.846 -50.733 1.00102.37 N
ATOM 17 C5 G A 5 -24.171 -5.750 -50.155 1.00102.36 C
ATOM 18 C6 G A 5 -25.519 -5.599 -49.738 1.00101.00 C
ATOM 19 O6 G A 5 -26.233 -4.594 -49.801 1.00 95.69 O
ATOM 20 N1 G A 5 -26.027 -6.779 -49.202 1.00104.65 N
ATOM 21 C2 G A 5 -25.327 -7.953 -49.083 1.00104.09 C
ATOM 22 N2 G A 5 -25.976 -8.989 -48.544 1.00103.27 N
ATOM 23 N3 G A 5 -24.075 -8.106 -49.466 1.00105.40 N
ATOM 24 C4 G A 5 -23.568 -6.975 -49.986 1.00103.69 C
ATOM 25 P U A 6 -20.823 -8.780 -55.310 1.00 95.58 P
ATOM 26 OP1 U A 6 -20.709 -7.322 -55.574 1.00 89.47 O
ATOM 27 OP2 U A 6 -20.071 -9.725 -56.171 1.00 99.19 O
ATOM 28 O5' U A 6 -22.358 -9.192 -55.224 1.00109.20 O
TER
ATOM 1 O3' G B 5 -20.336 -9.092 -53.810 1.00 97.80 O
ATOM 2 P U B 6 -20.823 -8.780 -55.310 1.00 95.58 P
ATOM 3 OP1 U B 6 -20.709 -7.322 -55.574 1.00 89.47 O
ATOM 4 OP2 U B 6 -20.071 -9.725 -56.171 1.00 99.19 O
ATOM 5 O5' U B 6 -22.358 -9.192 -55.224 1.00109.20 O
ATOM 6 C5' U B 6 -23.212 -8.976 -56.337 1.00105.38 C
ATOM 7 C4' U B 6 -24.428 -9.869 -56.301 1.00101.56 C
ATOM 8 O4' U B 6 -24.063 -11.236 -56.616 1.00 99.55 O
ATOM 9 C3' U B 6 -25.148 -9.972 -54.966 1.00104.80 C
ATOM 10 O3' U B 6 -26.020 -8.882 -54.741 1.00 94.69 O
ATOM 11 C2' U B 6 -25.882 -11.299 -55.081 1.00108.02 C
ATOM 12 O2' U B 6 -27.075 -11.143 -55.833 1.00107.18 O
ATOM 13 C1' U B 6 -24.899 -12.126 -55.907 1.00110.19 C
ATOM 14 N1 U B 6 -24.039 -13.002 -55.090 1.00121.08 N
ATOM 15 C2 U B 6 -24.609 -14.101 -54.475 1.00129.29 C
ATOM 16 O2 U B 6 -25.794 -14.382 -54.563 1.00131.66 O
ATOM 17 N3 U B 6 -23.727 -14.856 -53.743 1.00132.66 N
ATOM 18 C4 U B 6 -22.373 -14.627 -53.578 1.00131.01 C
ATOM 19 O4 U B 6 -21.703 -15.399 -52.887 1.00134.01 O
ATOM 20 C5 U B 6 -21.869 -13.472 -54.252 1.00125.02 C
ATOM 21 C6 U B 6 -22.701 -12.721 -54.968 1.00122.60 C
ATOM 22 P A B 7 -25.843 -7.971 -53.435 1.00104.36 P
ATOM 23 OP1 A B 7 -26.632 -6.752 -53.740 1.00104.32 O
ATOM 24 OP2 A B 7 -24.388 -7.870 -53.163 1.00102.94 O
ATOM 25 O5' A B 7 -26.543 -8.837 -52.296 1.00121.83 O
TER
ATOM 2 P G A 5 -18.960 -4.004 -53.173 1.00 90.85 P
ATOM 3 OP1 G A 5 -17.793 -4.117 -54.082 1.00 96.62 O
ATOM 4 OP2 G A 5 -20.060 -3.067 -53.511 1.00 91.34 O
ATOM 5 O5' G A 5 -19.561 -5.444 -52.856 1.00 75.89 O
ATOM 6 C5' G A 5 -18.717 -6.564 -52.637 1.00 94.18 C
ATOM 7 C4' G A 5 -19.467 -7.703 -51.992 1.00 95.15 C
ATOM 8 O4' G A 5 -20.011 -7.273 -50.717 1.00 96.94 O
ATOM 9 C3' G A 5 -20.679 -8.216 -52.752 1.00 97.06 C
ATOM 10 O3' G A 5 -20.336 -9.092 -53.810 1.00 97.80 O
ATOM 11 C2' G A 5 -21.502 -8.867 -51.648 1.00 96.62 C
ATOM 12 O2' G A 5 -20.949 -10.123 -51.282 1.00 91.49 O
ATOM 13 C1' G A 5 -21.265 -7.885 -50.502 1.00 98.73 C
ATOM 14 N9 G A 5 -22.295 -6.831 -50.468 1.00101.67 N
ATOM 15 C8 G A 5 -22.190 -5.530 -50.902 1.00101.80 C
ATOM 16 N7 G A 5 -23.289 -4.846 -50.733 1.00102.37 N
ATOM 17 C5 G A 5 -24.171 -5.750 -50.155 1.00102.36 C
ATOM 18 C6 G A 5 -25.519 -5.599 -49.738 1.00101.00 C
ATOM 19 O6 G A 5 -26.233 -4.594 -49.801 1.00 95.69 O
ATOM 20 N1 G A 5 -26.027 -6.779 -49.202 1.00104.65 N
ATOM 21 C2 G A 5 -25.327 -7.953 -49.083 1.00104.09 C
ATOM 22 N2 G A 5 -25.976 -8.989 -48.544 1.00103.27 N
ATOM 23 N3 G A 5 -24.075 -8.106 -49.466 1.00105.40 N
ATOM 24 C4 G A 5 -23.568 -6.975 -49.986 1.00103.69 C
ATOM 25 P U A 6 -20.823 -8.780 -55.310 1.00 95.58 P
ATOM 26 OP1 U A 6 -20.709 -7.322 -55.574 1.00 89.47 O
ATOM 27 OP2 U A 6 -20.071 -9.725 -56.171 1.00 99.19 O
ATOM 28 O5' U A 6 -22.358 -9.192 -55.224 1.00109.20 O
TER
ATOM 1 O3' G B 5 -20.336 -9.092 -53.810 1.00 97.80 O
ATOM 2 P U B 6 -20.823 -8.780 -55.310 1.00 95.58 P
ATOM 3 OP1 U B 6 -20.709 -7.322 -55.574 1.00 89.47 O
ATOM 4 OP2 U B 6 -20.071 -9.725 -56.171 1.00 99.19 O
ATOM 5 O5' U B 6 -22.358 -9.192 -55.224 1.00109.20 O
ATOM 6 C5' U B 6 -23.212 -8.976 -56.337 1.00105.38 C
ATOM 7 C4' U B 6 -24.428 -9.869 -56.301 1.00101.56 C
ATOM 8 O4' U B 6 -24.063 -11.236 -56.616 1.00 99.55 O
ATOM 9 C3' U B 6 -25.148 -9.972 -54.966 1.00104.80 C
ATOM 10 O3' U B 6 -26.020 -8.882 -54.741 1.00 94.69 O
ATOM 11 C2' U B 6 -25.882 -11.299 -55.081 1.00108.02 C
ATOM 12 O2' U B 6 -27.075 -11.143 -55.833 1.00107.18 O
ATOM 13 C1' U B 6 -24.899 -12.126 -55.907 1.00110.19 C
ATOM 14 N1 U B 6 -24.039 -13.002 -55.090 1.00121.08 N
ATOM 15 C2 U B 6 -24.609 -14.101 -54.475 1.00129.29 C
ATOM 16 O2 U B 6 -25.794 -14.382 -54.563 1.00131.66 O
ATOM 17 N3 U B 6 -23.727 -14.856 -53.743 1.00132.66 N
ATOM 18 C4 U B 6 -22.373 -14.627 -53.578 1.00131.01 C
ATOM 19 O4 U B 6 -21.703 -15.399 -52.887 1.00134.01 O
ATOM 20 C5 U B 6 -21.869 -13.472 -54.252 1.00125.02 C
ATOM 21 C6 U B 6 -22.701 -12.721 -54.968 1.00122.60 C
ATOM 22 P A B 7 -25.843 -7.971 -53.435 1.00104.36 P
ATOM 23 OP1 A B 7 -26.632 -6.752 -53.740 1.00104.32 O
ATOM 24 OP2 A B 7 -24.388 -7.870 -53.163 1.00102.94 O
ATOM 25 O5' A B 7 -26.543 -8.837 -52.296 1.00121.83 O
TER
Atoms:
OP1: (-17.793,-4.117,-54.082)
OP2: (-20.060,-3.067,-53.511)
C3': (-20.679,-8.216,-52.752)
C1': (-21.265,-7.885,-50.502)
C5': (-18.717,-6.564,-52.637)
O6: (-26.233,-4.594,-49.801)
O4': (-20.011,-7.273,-50.717)
C8: (-22.190,-5.530,-50.902)
C2: (-25.327,-7.953,-49.083)
C6: (-25.519,-5.599,-49.738)
C5: (-24.171,-5.750,-50.155)
C4: (-23.568,-6.975,-49.986)
P: (-18.960,-4.004,-53.173)
C4': (-19.467,-7.703,-51.992)
C2': (-21.502,-8.867,-51.648)
O2': (-20.949,-10.123,-51.282)
N1: (-26.027,-6.779,-49.202)
N2: (-25.976,-8.989,-48.544)
N3: (-24.075,-8.106,-49.466)
N7: (-23.289,-4.846,-50.733)
N9: (-22.295,-6.831,-50.468)
O5': (-19.561,-5.444,-52.856)
O3': (-20.336,-9.092,-53.810)
OP2: (-20.060,-3.067,-53.511)
C3': (-20.679,-8.216,-52.752)
C1': (-21.265,-7.885,-50.502)
C5': (-18.717,-6.564,-52.637)
O6: (-26.233,-4.594,-49.801)
O4': (-20.011,-7.273,-50.717)
C8: (-22.190,-5.530,-50.902)
C2: (-25.327,-7.953,-49.083)
C6: (-25.519,-5.599,-49.738)
C5: (-24.171,-5.750,-50.155)
C4: (-23.568,-6.975,-49.986)
P: (-18.960,-4.004,-53.173)
C4': (-19.467,-7.703,-51.992)
C2': (-21.502,-8.867,-51.648)
O2': (-20.949,-10.123,-51.282)
N1: (-26.027,-6.779,-49.202)
N2: (-25.976,-8.989,-48.544)
N3: (-24.075,-8.106,-49.466)
N7: (-23.289,-4.846,-50.733)
N9: (-22.295,-6.831,-50.468)
O5': (-19.561,-5.444,-52.856)
O3': (-20.336,-9.092,-53.810)
C4: (-22.373,-14.627,-53.578)
N3: (-23.727,-14.856,-53.743)
OP1: (-20.709,-7.322,-55.574)
OP2: (-20.071,-9.725,-56.171)
C2: (-24.609,-14.101,-54.475)
C1': (-24.899,-12.126,-55.907)
C3': (-25.148,-9.972,-54.966)
O5': (-22.358,-9.192,-55.224)
O4': (-24.063,-11.236,-56.616)
C5': (-23.212,-8.976,-56.337)
P: (-20.823,-8.780,-55.310)
C4': (-24.428,-9.869,-56.301)
C2': (-25.882,-11.299,-55.081)
O2': (-27.075,-11.143,-55.833)
N1: (-24.039,-13.002,-55.090)
O4: (-21.703,-15.399,-52.887)
O2: (-25.794,-14.382,-54.563)
C6: (-22.701,-12.721,-54.968)
C5: (-21.869,-13.472,-54.252)
O3': (-26.020,-8.882,-54.741)
N3: (-23.727,-14.856,-53.743)
OP1: (-20.709,-7.322,-55.574)
OP2: (-20.071,-9.725,-56.171)
C2: (-24.609,-14.101,-54.475)
C1': (-24.899,-12.126,-55.907)
C3': (-25.148,-9.972,-54.966)
O5': (-22.358,-9.192,-55.224)
O4': (-24.063,-11.236,-56.616)
C5': (-23.212,-8.976,-56.337)
P: (-20.823,-8.780,-55.310)
C4': (-24.428,-9.869,-56.301)
C2': (-25.882,-11.299,-55.081)
O2': (-27.075,-11.143,-55.833)
N1: (-24.039,-13.002,-55.090)
O4: (-21.703,-15.399,-52.887)
O2: (-25.794,-14.382,-54.563)
C6: (-22.701,-12.721,-54.968)
C5: (-21.869,-13.472,-54.252)
O3': (-26.020,-8.882,-54.741)
Image (generated by PyMOL):