ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ9:0516:0598

Extra

PDB:
ATOM 1 O3' U A 515 11.300 144.548 91.736 1.00 43.90 O
ATOM 2 P G A 516 11.340 143.952 93.229 1.00 44.96 P
ATOM 3 OP1 G A 516 10.002 144.198 93.853 1.00 44.94 O
ATOM 4 OP2 G A 516 12.576 144.426 93.926 1.00 44.30 O
ATOM 5 O5' G A 516 11.510 142.390 92.991 1.00 43.27 O
ATOM 6 C5' G A 516 10.452 141.608 92.423 1.00 41.54 C
ATOM 7 C4' G A 516 10.840 140.151 92.423 1.00 40.63 C
ATOM 8 O4' G A 516 11.953 139.955 91.512 1.00 41.80 O
ATOM 9 C3' G A 516 11.360 139.620 93.744 1.00 40.13 C
ATOM 10 O3' G A 516 10.296 139.299 94.635 1.00 38.93 O
ATOM 11 C2' G A 516 12.166 138.408 93.292 1.00 42.02 C
ATOM 12 O2' G A 516 11.339 137.311 92.952 1.00 44.81 O
ATOM 13 C1' G A 516 12.811 138.941 92.008 1.00 41.61 C
ATOM 14 N9 G A 516 14.150 139.510 92.185 1.00 41.43 N
ATOM 15 C8 G A 516 14.464 140.836 92.378 1.00 41.27 C
ATOM 16 N7 G A 516 15.747 141.045 92.519 1.00 42.26 N
ATOM 17 C5 G A 516 16.319 139.784 92.410 1.00 41.19 C
ATOM 18 C6 G A 516 17.680 139.384 92.486 1.00 41.96 C
ATOM 19 O6 G A 516 18.680 140.085 92.684 1.00 41.84 O
ATOM 20 N1 G A 516 17.821 138.011 92.314 1.00 41.54 N
ATOM 21 C2 G A 516 16.789 137.132 92.104 1.00 41.13 C
ATOM 22 N2 G A 516 17.138 135.835 91.959 1.00 41.06 N
ATOM 23 N3 G A 516 15.513 137.490 92.039 1.00 40.46 N
ATOM 24 C4 G A 516 15.352 138.823 92.199 1.00 40.86 C
ATOM 25 P G A 517 10.540 139.354 96.228 1.00 40.06 P
ATOM 26 OP1 G A 517 9.268 138.936 96.880 1.00 42.45 O
ATOM 27 OP2 G A 517 11.143 140.661 96.586 1.00 35.75 O
ATOM 28 O5' G A 517 11.610 138.204 96.496 1.00 37.81 O
TER

ATOM 1 O3' U B 597 14.508 127.771 85.585 1.00 40.83 O
ATOM 2 P G B 598 15.559 127.616 86.801 1.00 40.70 P
ATOM 3 OP1 G B 598 16.906 127.564 86.152 1.00 39.93 O
ATOM 4 OP2 G B 598 15.151 126.512 87.712 1.00 36.07 O
ATOM 5 O5' G B 598 15.414 128.998 87.593 1.00 37.70 O
ATOM 6 C5' G B 598 15.874 130.233 87.007 1.00 36.92 C
ATOM 7 C4' G B 598 15.717 131.388 87.977 1.00 37.42 C
ATOM 8 O4' G B 598 14.311 131.664 88.195 1.00 38.21 O
ATOM 9 C3' G B 598 16.255 131.185 89.382 1.00 38.74 C
ATOM 10 O3' G B 598 17.653 131.375 89.471 1.00 39.11 O
ATOM 11 C2' G B 598 15.502 132.245 90.164 1.00 39.43 C
ATOM 12 O2' G B 598 16.044 133.535 89.966 1.00 40.76 O
ATOM 13 C1' G B 598 14.120 132.154 89.514 1.00 38.74 C
ATOM 14 N9 G B 598 13.248 131.232 90.238 1.00 37.45 N
ATOM 15 C8 G B 598 12.987 129.912 89.945 1.00 37.69 C
ATOM 16 N7 G B 598 12.194 129.340 90.815 1.00 37.86 N
ATOM 17 C5 G B 598 11.903 130.348 91.729 1.00 37.01 C
ATOM 18 C6 G B 598 11.086 130.332 92.897 1.00 36.73 C
ATOM 19 O6 G B 598 10.431 129.392 93.375 1.00 37.62 O
ATOM 20 N1 G B 598 11.074 131.571 93.527 1.00 36.40 N
ATOM 21 C2 G B 598 11.757 132.683 93.098 1.00 36.46 C
ATOM 22 N2 G B 598 11.645 133.777 93.868 1.00 35.73 N
ATOM 23 N3 G B 598 12.504 132.719 92.007 1.00 35.70 N
ATOM 24 C4 G B 598 12.537 131.524 91.380 1.00 37.05 C
ATOM 25 P U B 599 18.499 130.472 90.489 1.00 39.83 P
ATOM 26 OP1 U B 599 19.935 130.677 90.174 1.00 40.47 O
ATOM 27 OP2 U B 599 17.925 129.096 90.431 1.00 37.75 O
ATOM 28 O5' U B 599 18.175 131.110 91.911 1.00 36.67 O
TER

Atoms:
OP1: (10.002,144.198,93.853)
OP2: (12.576,144.426,93.926)
C3': (11.360,139.620,93.744)
C1': (12.811,138.941,92.008)
C5': (10.452,141.608,92.423)
O6: (18.680,140.085,92.684)
O4': (11.953,139.955,91.512)
C8: (14.464,140.836,92.378)
C2: (16.789,137.132,92.104)
C6: (17.680,139.384,92.486)
C5: (16.319,139.784,92.410)
C4: (15.352,138.823,92.199)
P: (11.340,143.952,93.229)
C4': (10.840,140.151,92.423)
C2': (12.166,138.408,93.292)
O2': (11.339,137.311,92.952)
N1: (17.821,138.011,92.314)
N2: (17.138,135.835,91.959)
N3: (15.513,137.490,92.039)
N7: (15.747,141.045,92.519)
N9: (14.150,139.510,92.185)
O5': (11.510,142.390,92.991)
O3': (10.296,139.299,94.635)
OP1: (16.906,127.564,86.152)
OP2: (15.151,126.512,87.712)
C3': (16.255,131.185,89.382)
C1': (14.120,132.154,89.514)
C5': (15.874,130.233,87.007)
O6: (10.431,129.392,93.375)
O4': (14.311,131.664,88.195)
C8: (12.987,129.912,89.945)
C2: (11.757,132.683,93.098)
C6: (11.086,130.332,92.897)
C5: (11.903,130.348,91.729)
C4: (12.537,131.524,91.380)
P: (15.559,127.616,86.801)
C4': (15.717,131.388,87.977)
C2': (15.502,132.245,90.164)
O2': (16.044,133.535,89.966)
N1: (11.074,131.571,93.527)
N2: (11.645,133.777,93.868)
N3: (12.504,132.719,92.007)
N7: (12.194,129.340,90.815)
N9: (13.248,131.232,90.238)
O5': (15.414,128.998,87.593)
O3': (17.653,131.375,89.471)
Image (generated by PyMOL):
PyMOL image
show in jmol