Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3G9C:R108:R109
Extra
PDB:
ATOM 1 O3' G A 107 3.625 -50.636 79.097 1.00 70.27 O
ATOM 2 P G A 108 3.038 -52.022 78.554 1.00 70.34 P
ATOM 3 OP1 G A 108 2.025 -52.493 79.529 1.00 70.41 O
ATOM 4 OP2 G A 108 4.174 -52.902 78.194 1.00 70.46 O
ATOM 5 O5' G A 108 2.302 -51.593 77.202 1.00 69.95 O
ATOM 6 C5' G A 108 1.131 -50.787 77.246 1.00 69.80 C
ATOM 7 C4' G A 108 0.697 -50.406 75.843 1.00 69.69 C
ATOM 8 O4' G A 108 1.640 -49.480 75.248 1.00 69.52 O
ATOM 9 C3' G A 108 0.685 -51.544 74.836 1.00 69.60 C
ATOM 10 O3' G A 108 -0.423 -52.415 75.048 1.00 70.05 O
ATOM 11 C2' G A 108 0.609 -50.760 73.531 1.00 69.32 C
ATOM 12 O2' G A 108 -0.692 -50.289 73.232 1.00 69.22 O
ATOM 13 C1' G A 108 1.554 -49.594 73.835 1.00 69.15 C
ATOM 14 N9 G A 108 2.883 -49.800 73.259 1.00 68.58 N
ATOM 15 C8 G A 108 3.964 -50.426 73.837 1.00 68.41 C
ATOM 16 N7 G A 108 5.019 -50.468 73.071 1.00 68.03 N
ATOM 17 C5 G A 108 4.616 -49.831 71.905 1.00 68.02 C
ATOM 18 C6 G A 108 5.330 -49.573 70.707 1.00 67.82 C
ATOM 19 O6 G A 108 6.503 -49.866 70.439 1.00 67.73 O
ATOM 20 N1 G A 108 4.550 -48.901 69.764 1.00 67.74 N
ATOM 21 C2 G A 108 3.239 -48.526 69.958 1.00 67.89 C
ATOM 22 N2 G A 108 2.641 -47.885 68.945 1.00 67.92 N
ATOM 23 N3 G A 108 2.558 -48.764 71.074 1.00 68.06 N
ATOM 24 C4 G A 108 3.302 -49.418 72.004 1.00 68.22 C
ATOM 25 P U A 109 -0.208 -54.004 75.015 1.00 70.16 P
ATOM 26 OP1 U A 109 -1.446 -54.617 75.548 1.00 70.39 O
ATOM 27 OP2 U A 109 1.093 -54.329 75.650 1.00 70.03 O
ATOM 28 O5' U A 109 -0.119 -54.311 73.445 1.00 69.86 O
TER
ATOM 1 O3' G B 108 -0.423 -52.415 75.048 1.00 70.05 O
ATOM 2 P U B 109 -0.208 -54.004 75.015 1.00 70.16 P
ATOM 3 OP1 U B 109 -1.446 -54.617 75.548 1.00 70.39 O
ATOM 4 OP2 U B 109 1.093 -54.329 75.650 1.00 70.03 O
ATOM 5 O5' U B 109 -0.119 -54.311 73.445 1.00 69.86 O
ATOM 6 C5' U B 109 1.081 -54.777 72.823 1.00 70.12 C
ATOM 7 C4' U B 109 0.821 -55.201 71.384 1.00 70.34 C
ATOM 8 O4' U B 109 -0.592 -55.488 71.209 1.00 70.86 O
ATOM 9 C3' U B 109 1.171 -54.153 70.335 1.00 70.08 C
ATOM 10 O3' U B 109 2.479 -54.390 69.825 1.00 69.24 O
ATOM 11 C2' U B 109 0.110 -54.325 69.248 1.00 70.66 C
ATOM 12 O2' U B 109 0.525 -55.190 68.207 1.00 70.79 O
ATOM 13 C1' U B 109 -1.074 -54.936 69.997 1.00 70.97 C
ATOM 14 N1 U B 109 -2.212 -53.983 70.283 1.00 71.40 N
ATOM 15 C2 U B 109 -3.372 -54.100 69.540 1.00 71.78 C
ATOM 16 O2 U B 109 -3.521 -54.930 68.661 1.00 72.38 O
ATOM 17 N3 U B 109 -4.366 -53.202 69.859 1.00 71.93 N
ATOM 18 C4 U B 109 -4.322 -52.216 70.832 1.00 71.69 C
ATOM 19 O4 U B 109 -5.294 -51.486 71.003 1.00 71.49 O
ATOM 20 C5 U B 109 -3.084 -52.152 71.571 1.00 71.59 C
ATOM 21 C6 U B 109 -2.101 -53.017 71.274 1.00 71.55 C
ATOM 22 P G B 110 3.516 -53.179 69.697 1.00 68.58 P
ATOM 23 OP1 G B 110 4.773 -53.698 69.109 1.00 68.58 O
ATOM 24 OP2 G B 110 3.575 -52.512 71.017 1.00 68.76 O
ATOM 25 O5' G B 110 2.787 -52.200 68.652 1.00 67.65 O
TER
ATOM 2 P G A 108 3.038 -52.022 78.554 1.00 70.34 P
ATOM 3 OP1 G A 108 2.025 -52.493 79.529 1.00 70.41 O
ATOM 4 OP2 G A 108 4.174 -52.902 78.194 1.00 70.46 O
ATOM 5 O5' G A 108 2.302 -51.593 77.202 1.00 69.95 O
ATOM 6 C5' G A 108 1.131 -50.787 77.246 1.00 69.80 C
ATOM 7 C4' G A 108 0.697 -50.406 75.843 1.00 69.69 C
ATOM 8 O4' G A 108 1.640 -49.480 75.248 1.00 69.52 O
ATOM 9 C3' G A 108 0.685 -51.544 74.836 1.00 69.60 C
ATOM 10 O3' G A 108 -0.423 -52.415 75.048 1.00 70.05 O
ATOM 11 C2' G A 108 0.609 -50.760 73.531 1.00 69.32 C
ATOM 12 O2' G A 108 -0.692 -50.289 73.232 1.00 69.22 O
ATOM 13 C1' G A 108 1.554 -49.594 73.835 1.00 69.15 C
ATOM 14 N9 G A 108 2.883 -49.800 73.259 1.00 68.58 N
ATOM 15 C8 G A 108 3.964 -50.426 73.837 1.00 68.41 C
ATOM 16 N7 G A 108 5.019 -50.468 73.071 1.00 68.03 N
ATOM 17 C5 G A 108 4.616 -49.831 71.905 1.00 68.02 C
ATOM 18 C6 G A 108 5.330 -49.573 70.707 1.00 67.82 C
ATOM 19 O6 G A 108 6.503 -49.866 70.439 1.00 67.73 O
ATOM 20 N1 G A 108 4.550 -48.901 69.764 1.00 67.74 N
ATOM 21 C2 G A 108 3.239 -48.526 69.958 1.00 67.89 C
ATOM 22 N2 G A 108 2.641 -47.885 68.945 1.00 67.92 N
ATOM 23 N3 G A 108 2.558 -48.764 71.074 1.00 68.06 N
ATOM 24 C4 G A 108 3.302 -49.418 72.004 1.00 68.22 C
ATOM 25 P U A 109 -0.208 -54.004 75.015 1.00 70.16 P
ATOM 26 OP1 U A 109 -1.446 -54.617 75.548 1.00 70.39 O
ATOM 27 OP2 U A 109 1.093 -54.329 75.650 1.00 70.03 O
ATOM 28 O5' U A 109 -0.119 -54.311 73.445 1.00 69.86 O
TER
ATOM 1 O3' G B 108 -0.423 -52.415 75.048 1.00 70.05 O
ATOM 2 P U B 109 -0.208 -54.004 75.015 1.00 70.16 P
ATOM 3 OP1 U B 109 -1.446 -54.617 75.548 1.00 70.39 O
ATOM 4 OP2 U B 109 1.093 -54.329 75.650 1.00 70.03 O
ATOM 5 O5' U B 109 -0.119 -54.311 73.445 1.00 69.86 O
ATOM 6 C5' U B 109 1.081 -54.777 72.823 1.00 70.12 C
ATOM 7 C4' U B 109 0.821 -55.201 71.384 1.00 70.34 C
ATOM 8 O4' U B 109 -0.592 -55.488 71.209 1.00 70.86 O
ATOM 9 C3' U B 109 1.171 -54.153 70.335 1.00 70.08 C
ATOM 10 O3' U B 109 2.479 -54.390 69.825 1.00 69.24 O
ATOM 11 C2' U B 109 0.110 -54.325 69.248 1.00 70.66 C
ATOM 12 O2' U B 109 0.525 -55.190 68.207 1.00 70.79 O
ATOM 13 C1' U B 109 -1.074 -54.936 69.997 1.00 70.97 C
ATOM 14 N1 U B 109 -2.212 -53.983 70.283 1.00 71.40 N
ATOM 15 C2 U B 109 -3.372 -54.100 69.540 1.00 71.78 C
ATOM 16 O2 U B 109 -3.521 -54.930 68.661 1.00 72.38 O
ATOM 17 N3 U B 109 -4.366 -53.202 69.859 1.00 71.93 N
ATOM 18 C4 U B 109 -4.322 -52.216 70.832 1.00 71.69 C
ATOM 19 O4 U B 109 -5.294 -51.486 71.003 1.00 71.49 O
ATOM 20 C5 U B 109 -3.084 -52.152 71.571 1.00 71.59 C
ATOM 21 C6 U B 109 -2.101 -53.017 71.274 1.00 71.55 C
ATOM 22 P G B 110 3.516 -53.179 69.697 1.00 68.58 P
ATOM 23 OP1 G B 110 4.773 -53.698 69.109 1.00 68.58 O
ATOM 24 OP2 G B 110 3.575 -52.512 71.017 1.00 68.76 O
ATOM 25 O5' G B 110 2.787 -52.200 68.652 1.00 67.65 O
TER
Atoms:
OP1: (2.025,-52.493,79.529)
OP2: (4.174,-52.902,78.194)
C3': (0.685,-51.544,74.836)
C1': (1.554,-49.594,73.835)
C5': (1.131,-50.787,77.246)
O6: (6.503,-49.866,70.439)
O4': (1.640,-49.480,75.248)
C8: (3.964,-50.426,73.837)
C2: (3.239,-48.526,69.958)
C6: (5.330,-49.573,70.707)
C5: (4.616,-49.831,71.905)
C4: (3.302,-49.418,72.004)
P: (3.038,-52.022,78.554)
C4': (0.697,-50.406,75.843)
C2': (0.609,-50.760,73.531)
O2': (-0.692,-50.289,73.232)
N1: (4.550,-48.901,69.764)
N2: (2.641,-47.885,68.945)
N3: (2.558,-48.764,71.074)
N7: (5.019,-50.468,73.071)
N9: (2.883,-49.800,73.259)
O5': (2.302,-51.593,77.202)
O3': (-0.423,-52.415,75.048)
OP2: (4.174,-52.902,78.194)
C3': (0.685,-51.544,74.836)
C1': (1.554,-49.594,73.835)
C5': (1.131,-50.787,77.246)
O6: (6.503,-49.866,70.439)
O4': (1.640,-49.480,75.248)
C8: (3.964,-50.426,73.837)
C2: (3.239,-48.526,69.958)
C6: (5.330,-49.573,70.707)
C5: (4.616,-49.831,71.905)
C4: (3.302,-49.418,72.004)
P: (3.038,-52.022,78.554)
C4': (0.697,-50.406,75.843)
C2': (0.609,-50.760,73.531)
O2': (-0.692,-50.289,73.232)
N1: (4.550,-48.901,69.764)
N2: (2.641,-47.885,68.945)
N3: (2.558,-48.764,71.074)
N7: (5.019,-50.468,73.071)
N9: (2.883,-49.800,73.259)
O5': (2.302,-51.593,77.202)
O3': (-0.423,-52.415,75.048)
C4: (-4.322,-52.216,70.832)
N3: (-4.366,-53.202,69.859)
OP1: (-1.446,-54.617,75.548)
OP2: (1.093,-54.329,75.650)
C2: (-3.372,-54.100,69.540)
C1': (-1.074,-54.936,69.997)
C3': (1.171,-54.153,70.335)
O5': (-0.119,-54.311,73.445)
O4': (-0.592,-55.488,71.209)
C5': (1.081,-54.777,72.823)
P: (-0.208,-54.004,75.015)
C4': (0.821,-55.201,71.384)
C2': (0.110,-54.325,69.248)
O2': (0.525,-55.190,68.207)
N1: (-2.212,-53.983,70.283)
O4: (-5.294,-51.486,71.003)
O2: (-3.521,-54.930,68.661)
C6: (-2.101,-53.017,71.274)
C5: (-3.084,-52.152,71.571)
O3': (2.479,-54.390,69.825)
N3: (-4.366,-53.202,69.859)
OP1: (-1.446,-54.617,75.548)
OP2: (1.093,-54.329,75.650)
C2: (-3.372,-54.100,69.540)
C1': (-1.074,-54.936,69.997)
C3': (1.171,-54.153,70.335)
O5': (-0.119,-54.311,73.445)
O4': (-0.592,-55.488,71.209)
C5': (1.081,-54.777,72.823)
P: (-0.208,-54.004,75.015)
C4': (0.821,-55.201,71.384)
C2': (0.110,-54.325,69.248)
O2': (0.525,-55.190,68.207)
N1: (-2.212,-53.983,70.283)
O4: (-5.294,-51.486,71.003)
O2: (-3.521,-54.930,68.661)
C6: (-2.101,-53.017,71.274)
C5: (-3.084,-52.152,71.571)
O3': (2.479,-54.390,69.825)
Image (generated by PyMOL):