Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0565:0566
Extra
PDB:
ATOM 1 O3' C A 564 1.843 81.328 133.646 1.00 78.13 O
ATOM 2 P G A 565 2.464 81.820 135.041 1.00 78.06 P
ATOM 3 OP1 G A 565 3.149 80.654 135.658 1.00 77.56 O
ATOM 4 OP2 G A 565 1.411 82.551 135.801 1.00 76.54 O
ATOM 5 O5' G A 565 3.576 82.869 134.595 1.00 78.23 O
ATOM 6 C5' G A 565 4.653 82.470 133.723 1.00 75.94 C
ATOM 7 C4' G A 565 5.490 83.664 133.335 1.00 74.50 C
ATOM 8 O4' G A 565 4.735 84.553 132.463 1.00 74.09 O
ATOM 9 C3' G A 565 5.915 84.572 134.473 1.00 73.66 C
ATOM 10 O3' G A 565 6.984 84.030 135.239 1.00 71.88 O
ATOM 11 C2' G A 565 6.275 85.848 133.722 1.00 74.08 C
ATOM 12 O2' G A 565 7.525 85.769 133.061 1.00 73.83 O
ATOM 13 C1' G A 565 5.156 85.895 132.678 1.00 73.92 C
ATOM 14 N9 G A 565 4.013 86.679 133.142 1.00 74.06 N
ATOM 15 C8 G A 565 2.827 86.205 133.649 1.00 74.02 C
ATOM 16 N7 G A 565 2.011 87.156 134.016 1.00 74.33 N
ATOM 17 C5 G A 565 2.694 88.328 133.728 1.00 73.54 C
ATOM 18 C6 G A 565 2.318 89.679 133.921 1.00 73.63 C
ATOM 19 O6 G A 565 1.274 90.126 134.406 1.00 73.68 O
ATOM 20 N1 G A 565 3.309 90.553 133.488 1.00 74.49 N
ATOM 21 C2 G A 565 4.511 90.177 132.944 1.00 74.74 C
ATOM 22 N2 G A 565 5.338 91.171 132.585 1.00 74.31 N
ATOM 23 N3 G A 565 4.876 88.919 132.764 1.00 74.48 N
ATOM 24 C4 G A 565 3.926 88.053 133.177 1.00 73.93 C
ATOM 25 P C A 566 6.855 83.969 136.843 1.00 69.82 P
ATOM 26 OP1 C A 566 8.117 83.426 137.400 1.00 71.36 O
ATOM 27 OP2 C A 566 5.569 83.298 137.156 1.00 71.15 O
ATOM 28 O5' C A 566 6.741 85.494 137.286 1.00 68.75 O
TER
ATOM 1 O3' G B 565 6.984 84.030 135.239 1.00 71.88 O
ATOM 2 P C B 566 6.855 83.969 136.843 1.00 69.82 P
ATOM 3 OP1 C B 566 8.117 83.426 137.400 1.00 71.36 O
ATOM 4 OP2 C B 566 5.569 83.298 137.156 1.00 71.15 O
ATOM 5 O5' C B 566 6.741 85.494 137.286 1.00 68.75 O
ATOM 6 C5' C B 566 6.325 85.847 138.617 1.00 67.48 C
ATOM 7 C4' C B 566 7.064 87.078 139.093 1.00 67.05 C
ATOM 8 O4' C B 566 8.484 86.793 139.161 1.00 66.92 O
ATOM 9 C3' C B 566 6.971 88.299 138.192 1.00 66.48 C
ATOM 10 O3' C B 566 5.771 89.023 138.461 1.00 66.21 O
ATOM 11 C2' C B 566 8.213 89.098 138.580 1.00 66.01 C
ATOM 12 O2' C B 566 8.017 89.895 139.730 1.00 65.71 O
ATOM 13 C1' C B 566 9.213 87.983 138.910 1.00 65.47 C
ATOM 14 N1 C B 566 10.258 87.701 137.905 1.00 63.86 N
ATOM 15 C2 C B 566 11.426 88.477 137.907 1.00 63.68 C
ATOM 16 O2 C B 566 11.531 89.408 138.720 1.00 64.03 O
ATOM 17 N3 C B 566 12.409 88.193 137.025 1.00 63.26 N
ATOM 18 C4 C B 566 12.260 87.185 136.164 1.00 63.89 C
ATOM 19 N4 C B 566 13.271 86.919 135.332 1.00 62.99 N
ATOM 20 C5 C B 566 11.072 86.397 136.122 1.00 63.56 C
ATOM 21 C6 C B 566 10.107 86.688 136.999 1.00 63.58 C
ATOM 22 P G B 567 4.863 89.547 137.245 1.00 66.72 P
ATOM 23 OP1 G B 567 3.654 90.202 137.817 1.00 66.20 O
ATOM 24 OP2 G B 567 4.705 88.426 136.275 1.00 65.68 O
ATOM 25 O5' G B 567 5.747 90.686 136.569 1.00 65.45 O
TER
ATOM 2 P G A 565 2.464 81.820 135.041 1.00 78.06 P
ATOM 3 OP1 G A 565 3.149 80.654 135.658 1.00 77.56 O
ATOM 4 OP2 G A 565 1.411 82.551 135.801 1.00 76.54 O
ATOM 5 O5' G A 565 3.576 82.869 134.595 1.00 78.23 O
ATOM 6 C5' G A 565 4.653 82.470 133.723 1.00 75.94 C
ATOM 7 C4' G A 565 5.490 83.664 133.335 1.00 74.50 C
ATOM 8 O4' G A 565 4.735 84.553 132.463 1.00 74.09 O
ATOM 9 C3' G A 565 5.915 84.572 134.473 1.00 73.66 C
ATOM 10 O3' G A 565 6.984 84.030 135.239 1.00 71.88 O
ATOM 11 C2' G A 565 6.275 85.848 133.722 1.00 74.08 C
ATOM 12 O2' G A 565 7.525 85.769 133.061 1.00 73.83 O
ATOM 13 C1' G A 565 5.156 85.895 132.678 1.00 73.92 C
ATOM 14 N9 G A 565 4.013 86.679 133.142 1.00 74.06 N
ATOM 15 C8 G A 565 2.827 86.205 133.649 1.00 74.02 C
ATOM 16 N7 G A 565 2.011 87.156 134.016 1.00 74.33 N
ATOM 17 C5 G A 565 2.694 88.328 133.728 1.00 73.54 C
ATOM 18 C6 G A 565 2.318 89.679 133.921 1.00 73.63 C
ATOM 19 O6 G A 565 1.274 90.126 134.406 1.00 73.68 O
ATOM 20 N1 G A 565 3.309 90.553 133.488 1.00 74.49 N
ATOM 21 C2 G A 565 4.511 90.177 132.944 1.00 74.74 C
ATOM 22 N2 G A 565 5.338 91.171 132.585 1.00 74.31 N
ATOM 23 N3 G A 565 4.876 88.919 132.764 1.00 74.48 N
ATOM 24 C4 G A 565 3.926 88.053 133.177 1.00 73.93 C
ATOM 25 P C A 566 6.855 83.969 136.843 1.00 69.82 P
ATOM 26 OP1 C A 566 8.117 83.426 137.400 1.00 71.36 O
ATOM 27 OP2 C A 566 5.569 83.298 137.156 1.00 71.15 O
ATOM 28 O5' C A 566 6.741 85.494 137.286 1.00 68.75 O
TER
ATOM 1 O3' G B 565 6.984 84.030 135.239 1.00 71.88 O
ATOM 2 P C B 566 6.855 83.969 136.843 1.00 69.82 P
ATOM 3 OP1 C B 566 8.117 83.426 137.400 1.00 71.36 O
ATOM 4 OP2 C B 566 5.569 83.298 137.156 1.00 71.15 O
ATOM 5 O5' C B 566 6.741 85.494 137.286 1.00 68.75 O
ATOM 6 C5' C B 566 6.325 85.847 138.617 1.00 67.48 C
ATOM 7 C4' C B 566 7.064 87.078 139.093 1.00 67.05 C
ATOM 8 O4' C B 566 8.484 86.793 139.161 1.00 66.92 O
ATOM 9 C3' C B 566 6.971 88.299 138.192 1.00 66.48 C
ATOM 10 O3' C B 566 5.771 89.023 138.461 1.00 66.21 O
ATOM 11 C2' C B 566 8.213 89.098 138.580 1.00 66.01 C
ATOM 12 O2' C B 566 8.017 89.895 139.730 1.00 65.71 O
ATOM 13 C1' C B 566 9.213 87.983 138.910 1.00 65.47 C
ATOM 14 N1 C B 566 10.258 87.701 137.905 1.00 63.86 N
ATOM 15 C2 C B 566 11.426 88.477 137.907 1.00 63.68 C
ATOM 16 O2 C B 566 11.531 89.408 138.720 1.00 64.03 O
ATOM 17 N3 C B 566 12.409 88.193 137.025 1.00 63.26 N
ATOM 18 C4 C B 566 12.260 87.185 136.164 1.00 63.89 C
ATOM 19 N4 C B 566 13.271 86.919 135.332 1.00 62.99 N
ATOM 20 C5 C B 566 11.072 86.397 136.122 1.00 63.56 C
ATOM 21 C6 C B 566 10.107 86.688 136.999 1.00 63.58 C
ATOM 22 P G B 567 4.863 89.547 137.245 1.00 66.72 P
ATOM 23 OP1 G B 567 3.654 90.202 137.817 1.00 66.20 O
ATOM 24 OP2 G B 567 4.705 88.426 136.275 1.00 65.68 O
ATOM 25 O5' G B 567 5.747 90.686 136.569 1.00 65.45 O
TER
Atoms:
OP1: (3.149,80.654,135.658)
OP2: (1.411,82.551,135.801)
C3': (5.915,84.572,134.473)
C1': (5.156,85.895,132.678)
C5': (4.653,82.470,133.723)
O6: (1.274,90.126,134.406)
O4': (4.735,84.553,132.463)
C8: (2.827,86.205,133.649)
C2: (4.511,90.177,132.944)
C6: (2.318,89.679,133.921)
C5: (2.694,88.328,133.728)
C4: (3.926,88.053,133.177)
P: (2.464,81.820,135.041)
C4': (5.490,83.664,133.335)
C2': (6.275,85.848,133.722)
O2': (7.525,85.769,133.061)
N1: (3.309,90.553,133.488)
N2: (5.338,91.171,132.585)
N3: (4.876,88.919,132.764)
N7: (2.011,87.156,134.016)
N9: (4.013,86.679,133.142)
O5': (3.576,82.869,134.595)
O3': (6.984,84.030,135.239)
OP2: (1.411,82.551,135.801)
C3': (5.915,84.572,134.473)
C1': (5.156,85.895,132.678)
C5': (4.653,82.470,133.723)
O6: (1.274,90.126,134.406)
O4': (4.735,84.553,132.463)
C8: (2.827,86.205,133.649)
C2: (4.511,90.177,132.944)
C6: (2.318,89.679,133.921)
C5: (2.694,88.328,133.728)
C4: (3.926,88.053,133.177)
P: (2.464,81.820,135.041)
C4': (5.490,83.664,133.335)
C2': (6.275,85.848,133.722)
O2': (7.525,85.769,133.061)
N1: (3.309,90.553,133.488)
N2: (5.338,91.171,132.585)
N3: (4.876,88.919,132.764)
N7: (2.011,87.156,134.016)
N9: (4.013,86.679,133.142)
O5': (3.576,82.869,134.595)
O3': (6.984,84.030,135.239)
C2: (11.426,88.477,137.907)
OP1: (8.117,83.426,137.400)
OP2: (5.569,83.298,137.156)
C4: (12.260,87.185,136.164)
O5': (6.741,85.494,137.286)
C3': (6.971,88.299,138.192)
C1': (9.213,87.983,138.910)
O4': (8.484,86.793,139.161)
C5': (6.325,85.847,138.617)
P: (6.855,83.969,136.843)
O2: (11.531,89.408,138.720)
C4': (7.064,87.078,139.093)
C2': (8.213,89.098,138.580)
O2': (8.017,89.895,139.730)
N1: (10.258,87.701,137.905)
N3: (12.409,88.193,137.025)
N4: (13.271,86.919,135.332)
C6: (10.107,86.688,136.999)
C5: (11.072,86.397,136.122)
O3': (5.771,89.023,138.461)
OP1: (8.117,83.426,137.400)
OP2: (5.569,83.298,137.156)
C4: (12.260,87.185,136.164)
O5': (6.741,85.494,137.286)
C3': (6.971,88.299,138.192)
C1': (9.213,87.983,138.910)
O4': (8.484,86.793,139.161)
C5': (6.325,85.847,138.617)
P: (6.855,83.969,136.843)
O2: (11.531,89.408,138.720)
C4': (7.064,87.078,139.093)
C2': (8.213,89.098,138.580)
O2': (8.017,89.895,139.730)
N1: (10.258,87.701,137.905)
N3: (12.409,88.193,137.025)
N4: (13.271,86.919,135.332)
C6: (10.107,86.688,136.999)
C5: (11.072,86.397,136.122)
O3': (5.771,89.023,138.461)
Image (generated by PyMOL):