Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0677:0717
Extra
PDB:
ATOM 1 O3' A A 676 49.934 72.914 43.237 1.00 58.30 O
ATOM 2 P G A 677 50.545 74.205 43.976 1.00 55.14 P
ATOM 3 OP1 G A 677 49.440 75.156 44.296 1.00 53.75 O
ATOM 4 OP2 G A 677 51.723 74.677 43.202 1.00 54.47 O
ATOM 5 O5' G A 677 51.064 73.559 45.334 1.00 53.53 O
ATOM 6 C5' G A 677 50.220 72.656 46.088 1.00 51.90 C
ATOM 7 C4' G A 677 50.847 71.283 46.164 1.00 52.05 C
ATOM 8 O4' G A 677 50.924 70.689 44.839 1.00 51.41 O
ATOM 9 C3' G A 677 52.289 71.248 46.630 1.00 53.01 C
ATOM 10 O3' G A 677 52.401 71.377 48.035 1.00 52.12 O
ATOM 11 C2' G A 677 52.760 69.889 46.129 1.00 53.05 C
ATOM 12 O2' G A 677 52.367 68.824 46.965 1.00 54.15 O
ATOM 13 C1' G A 677 52.034 69.796 44.784 1.00 52.78 C
ATOM 14 N9 G A 677 52.894 70.163 43.659 1.00 53.16 N
ATOM 15 C8 G A 677 52.954 71.377 43.017 1.00 54.40 C
ATOM 16 N7 G A 677 53.844 71.408 42.061 1.00 53.75 N
ATOM 17 C5 G A 677 54.398 70.138 42.066 1.00 51.85 C
ATOM 18 C6 G A 677 55.408 69.583 41.251 1.00 52.01 C
ATOM 19 O6 G A 677 56.031 70.115 40.328 1.00 51.79 O
ATOM 20 N1 G A 677 55.673 68.264 41.595 1.00 52.85 N
ATOM 21 C2 G A 677 55.040 67.567 42.591 1.00 52.71 C
ATOM 22 N2 G A 677 55.434 66.298 42.769 1.00 51.99 N
ATOM 23 N3 G A 677 54.090 68.074 43.355 1.00 52.14 N
ATOM 24 C4 G A 677 53.823 69.356 43.042 1.00 51.84 C
ATOM 25 P G A 678 53.725 72.028 48.662 1.00 52.14 P
ATOM 26 OP1 G A 678 53.475 72.215 50.107 1.00 51.02 O
ATOM 27 OP2 G A 678 54.147 73.184 47.827 1.00 52.84 O
ATOM 28 O5' G A 678 54.826 70.902 48.478 1.00 50.53 O
TER
ATOM 1 O3' C B 716 49.799 57.260 44.381 1.00 62.99 O
ATOM 2 P G B 717 51.374 57.539 44.351 1.00 61.53 P
ATOM 3 OP1 G B 717 51.924 56.986 43.087 1.00 62.29 O
ATOM 4 OP2 G B 717 51.929 57.097 45.649 1.00 62.00 O
ATOM 5 O5' G B 717 51.468 59.123 44.278 1.00 62.35 O
ATOM 6 C5' G B 717 51.226 59.824 43.043 1.00 61.06 C
ATOM 7 C4' G B 717 51.740 61.237 43.144 1.00 59.31 C
ATOM 8 O4' G B 717 50.972 61.945 44.149 1.00 59.53 O
ATOM 9 C3' G B 717 53.178 61.371 43.621 1.00 58.30 C
ATOM 10 O3' G B 717 54.114 61.199 42.566 1.00 57.63 O
ATOM 11 C2' G B 717 53.190 62.781 44.181 1.00 58.56 C
ATOM 12 O2' G B 717 53.247 63.763 43.170 1.00 58.41 O
ATOM 13 C1' G B 717 51.819 62.837 44.853 1.00 58.95 C
ATOM 14 N9 G B 717 51.877 62.421 46.253 1.00 60.56 N
ATOM 15 C8 G B 717 51.502 61.209 46.794 1.00 60.47 C
ATOM 16 N7 G B 717 51.682 61.148 48.087 1.00 59.96 N
ATOM 17 C5 G B 717 52.205 62.392 48.420 1.00 60.49 C
ATOM 18 C6 G B 717 52.595 62.922 49.674 1.00 60.33 C
ATOM 19 O6 G B 717 52.558 62.380 50.787 1.00 60.92 O
ATOM 20 N1 G B 717 53.069 64.228 49.552 1.00 60.72 N
ATOM 21 C2 G B 717 53.158 64.932 48.377 1.00 58.77 C
ATOM 22 N2 G B 717 53.643 66.169 48.458 1.00 58.80 N
ATOM 23 N3 G B 717 52.797 64.454 47.209 1.00 59.54 N
ATOM 24 C4 G B 717 52.332 63.188 47.300 1.00 61.03 C
ATOM 25 P U B 718 55.577 60.610 42.881 1.00 56.49 P
ATOM 26 OP1 U B 718 56.252 60.461 41.573 1.00 55.86 O
ATOM 27 OP2 U B 718 55.472 59.443 43.792 1.00 56.04 O
ATOM 28 O5' U B 718 56.303 61.773 43.684 1.00 55.76 O
TER
ATOM 2 P G A 677 50.545 74.205 43.976 1.00 55.14 P
ATOM 3 OP1 G A 677 49.440 75.156 44.296 1.00 53.75 O
ATOM 4 OP2 G A 677 51.723 74.677 43.202 1.00 54.47 O
ATOM 5 O5' G A 677 51.064 73.559 45.334 1.00 53.53 O
ATOM 6 C5' G A 677 50.220 72.656 46.088 1.00 51.90 C
ATOM 7 C4' G A 677 50.847 71.283 46.164 1.00 52.05 C
ATOM 8 O4' G A 677 50.924 70.689 44.839 1.00 51.41 O
ATOM 9 C3' G A 677 52.289 71.248 46.630 1.00 53.01 C
ATOM 10 O3' G A 677 52.401 71.377 48.035 1.00 52.12 O
ATOM 11 C2' G A 677 52.760 69.889 46.129 1.00 53.05 C
ATOM 12 O2' G A 677 52.367 68.824 46.965 1.00 54.15 O
ATOM 13 C1' G A 677 52.034 69.796 44.784 1.00 52.78 C
ATOM 14 N9 G A 677 52.894 70.163 43.659 1.00 53.16 N
ATOM 15 C8 G A 677 52.954 71.377 43.017 1.00 54.40 C
ATOM 16 N7 G A 677 53.844 71.408 42.061 1.00 53.75 N
ATOM 17 C5 G A 677 54.398 70.138 42.066 1.00 51.85 C
ATOM 18 C6 G A 677 55.408 69.583 41.251 1.00 52.01 C
ATOM 19 O6 G A 677 56.031 70.115 40.328 1.00 51.79 O
ATOM 20 N1 G A 677 55.673 68.264 41.595 1.00 52.85 N
ATOM 21 C2 G A 677 55.040 67.567 42.591 1.00 52.71 C
ATOM 22 N2 G A 677 55.434 66.298 42.769 1.00 51.99 N
ATOM 23 N3 G A 677 54.090 68.074 43.355 1.00 52.14 N
ATOM 24 C4 G A 677 53.823 69.356 43.042 1.00 51.84 C
ATOM 25 P G A 678 53.725 72.028 48.662 1.00 52.14 P
ATOM 26 OP1 G A 678 53.475 72.215 50.107 1.00 51.02 O
ATOM 27 OP2 G A 678 54.147 73.184 47.827 1.00 52.84 O
ATOM 28 O5' G A 678 54.826 70.902 48.478 1.00 50.53 O
TER
ATOM 1 O3' C B 716 49.799 57.260 44.381 1.00 62.99 O
ATOM 2 P G B 717 51.374 57.539 44.351 1.00 61.53 P
ATOM 3 OP1 G B 717 51.924 56.986 43.087 1.00 62.29 O
ATOM 4 OP2 G B 717 51.929 57.097 45.649 1.00 62.00 O
ATOM 5 O5' G B 717 51.468 59.123 44.278 1.00 62.35 O
ATOM 6 C5' G B 717 51.226 59.824 43.043 1.00 61.06 C
ATOM 7 C4' G B 717 51.740 61.237 43.144 1.00 59.31 C
ATOM 8 O4' G B 717 50.972 61.945 44.149 1.00 59.53 O
ATOM 9 C3' G B 717 53.178 61.371 43.621 1.00 58.30 C
ATOM 10 O3' G B 717 54.114 61.199 42.566 1.00 57.63 O
ATOM 11 C2' G B 717 53.190 62.781 44.181 1.00 58.56 C
ATOM 12 O2' G B 717 53.247 63.763 43.170 1.00 58.41 O
ATOM 13 C1' G B 717 51.819 62.837 44.853 1.00 58.95 C
ATOM 14 N9 G B 717 51.877 62.421 46.253 1.00 60.56 N
ATOM 15 C8 G B 717 51.502 61.209 46.794 1.00 60.47 C
ATOM 16 N7 G B 717 51.682 61.148 48.087 1.00 59.96 N
ATOM 17 C5 G B 717 52.205 62.392 48.420 1.00 60.49 C
ATOM 18 C6 G B 717 52.595 62.922 49.674 1.00 60.33 C
ATOM 19 O6 G B 717 52.558 62.380 50.787 1.00 60.92 O
ATOM 20 N1 G B 717 53.069 64.228 49.552 1.00 60.72 N
ATOM 21 C2 G B 717 53.158 64.932 48.377 1.00 58.77 C
ATOM 22 N2 G B 717 53.643 66.169 48.458 1.00 58.80 N
ATOM 23 N3 G B 717 52.797 64.454 47.209 1.00 59.54 N
ATOM 24 C4 G B 717 52.332 63.188 47.300 1.00 61.03 C
ATOM 25 P U B 718 55.577 60.610 42.881 1.00 56.49 P
ATOM 26 OP1 U B 718 56.252 60.461 41.573 1.00 55.86 O
ATOM 27 OP2 U B 718 55.472 59.443 43.792 1.00 56.04 O
ATOM 28 O5' U B 718 56.303 61.773 43.684 1.00 55.76 O
TER
Atoms:
OP1: (49.440,75.156,44.296)
OP2: (51.723,74.677,43.202)
C3': (52.289,71.248,46.630)
C1': (52.034,69.796,44.784)
C5': (50.220,72.656,46.088)
O6: (56.031,70.115,40.328)
O4': (50.924,70.689,44.839)
C8: (52.954,71.377,43.017)
C2: (55.040,67.567,42.591)
C6: (55.408,69.583,41.251)
C5: (54.398,70.138,42.066)
C4: (53.823,69.356,43.042)
P: (50.545,74.205,43.976)
C4': (50.847,71.283,46.164)
C2': (52.760,69.889,46.129)
O2': (52.367,68.824,46.965)
N1: (55.673,68.264,41.595)
N2: (55.434,66.298,42.769)
N3: (54.090,68.074,43.355)
N7: (53.844,71.408,42.061)
N9: (52.894,70.163,43.659)
O5': (51.064,73.559,45.334)
O3': (52.401,71.377,48.035)
OP2: (51.723,74.677,43.202)
C3': (52.289,71.248,46.630)
C1': (52.034,69.796,44.784)
C5': (50.220,72.656,46.088)
O6: (56.031,70.115,40.328)
O4': (50.924,70.689,44.839)
C8: (52.954,71.377,43.017)
C2: (55.040,67.567,42.591)
C6: (55.408,69.583,41.251)
C5: (54.398,70.138,42.066)
C4: (53.823,69.356,43.042)
P: (50.545,74.205,43.976)
C4': (50.847,71.283,46.164)
C2': (52.760,69.889,46.129)
O2': (52.367,68.824,46.965)
N1: (55.673,68.264,41.595)
N2: (55.434,66.298,42.769)
N3: (54.090,68.074,43.355)
N7: (53.844,71.408,42.061)
N9: (52.894,70.163,43.659)
O5': (51.064,73.559,45.334)
O3': (52.401,71.377,48.035)
OP1: (51.924,56.986,43.087)
OP2: (51.929,57.097,45.649)
C3': (53.178,61.371,43.621)
C1': (51.819,62.837,44.853)
C5': (51.226,59.824,43.043)
O6: (52.558,62.380,50.787)
O4': (50.972,61.945,44.149)
C8: (51.502,61.209,46.794)
C2: (53.158,64.932,48.377)
C6: (52.595,62.922,49.674)
C5: (52.205,62.392,48.420)
C4: (52.332,63.188,47.300)
P: (51.374,57.539,44.351)
C4': (51.740,61.237,43.144)
C2': (53.190,62.781,44.181)
O2': (53.247,63.763,43.170)
N1: (53.069,64.228,49.552)
N2: (53.643,66.169,48.458)
N3: (52.797,64.454,47.209)
N7: (51.682,61.148,48.087)
N9: (51.877,62.421,46.253)
O5': (51.468,59.123,44.278)
O3': (54.114,61.199,42.566)
OP2: (51.929,57.097,45.649)
C3': (53.178,61.371,43.621)
C1': (51.819,62.837,44.853)
C5': (51.226,59.824,43.043)
O6: (52.558,62.380,50.787)
O4': (50.972,61.945,44.149)
C8: (51.502,61.209,46.794)
C2: (53.158,64.932,48.377)
C6: (52.595,62.922,49.674)
C5: (52.205,62.392,48.420)
C4: (52.332,63.188,47.300)
P: (51.374,57.539,44.351)
C4': (51.740,61.237,43.144)
C2': (53.190,62.781,44.181)
O2': (53.247,63.763,43.170)
N1: (53.069,64.228,49.552)
N2: (53.643,66.169,48.458)
N3: (52.797,64.454,47.209)
N7: (51.682,61.148,48.087)
N9: (51.877,62.421,46.253)
O5': (51.468,59.123,44.278)
O3': (54.114,61.199,42.566)
Image (generated by PyMOL):