Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0516:0598
Extra
PDB:
ATOM 1 O3' U A 515 11.437 145.963 91.944 1.00 61.72 O
ATOM 2 P G A 516 11.442 145.394 93.452 1.00 62.75 P
ATOM 3 OP1 G A 516 10.090 145.658 94.029 1.00 62.85 O
ATOM 4 OP2 G A 516 12.647 145.919 94.147 1.00 62.95 O
ATOM 5 O5' G A 516 11.610 143.820 93.274 1.00 60.61 O
ATOM 6 C5' G A 516 10.526 143.020 92.778 1.00 61.69 C
ATOM 7 C4' G A 516 10.955 141.580 92.646 1.00 62.35 C
ATOM 8 O4' G A 516 12.029 141.491 91.670 1.00 62.27 O
ATOM 9 C3' G A 516 11.549 140.949 93.897 1.00 62.33 C
ATOM 10 O3' G A 516 10.562 140.522 94.830 1.00 62.49 O
ATOM 11 C2' G A 516 12.373 139.806 93.314 1.00 62.06 C
ATOM 12 O2' G A 516 11.609 138.676 92.940 1.00 61.07 O
ATOM 13 C1' G A 516 12.947 140.475 92.062 1.00 61.40 C
ATOM 14 N9 G A 516 14.245 141.091 92.337 1.00 59.01 N
ATOM 15 C8 G A 516 14.519 142.422 92.561 1.00 58.11 C
ATOM 16 N7 G A 516 15.779 142.648 92.817 1.00 57.33 N
ATOM 17 C5 G A 516 16.372 141.394 92.748 1.00 57.57 C
ATOM 18 C6 G A 516 17.724 141.004 92.933 1.00 56.68 C
ATOM 19 O6 G A 516 18.698 141.711 93.210 1.00 55.39 O
ATOM 20 N1 G A 516 17.885 139.630 92.765 1.00 55.95 N
ATOM 21 C2 G A 516 16.873 138.747 92.465 1.00 56.36 C
ATOM 22 N2 G A 516 17.215 137.459 92.344 1.00 56.97 N
ATOM 23 N3 G A 516 15.616 139.099 92.296 1.00 56.60 N
ATOM 24 C4 G A 516 15.438 140.426 92.448 1.00 57.64 C
ATOM 25 P G A 517 10.828 140.712 96.407 1.00 64.11 P
ATOM 26 OP1 G A 517 9.553 140.407 97.117 1.00 63.98 O
ATOM 27 OP2 G A 517 11.493 142.023 96.635 1.00 63.68 O
ATOM 28 O5' G A 517 11.876 139.563 96.755 1.00 62.85 O
TER
ATOM 1 O3' U B 597 14.618 129.156 85.902 1.00 55.21 O
ATOM 2 P G B 598 15.751 128.989 87.029 1.00 54.71 P
ATOM 3 OP1 G B 598 17.057 128.933 86.299 1.00 53.25 O
ATOM 4 OP2 G B 598 15.357 127.861 87.918 1.00 53.13 O
ATOM 5 O5' G B 598 15.654 130.352 87.853 1.00 50.23 O
ATOM 6 C5' G B 598 16.068 131.595 87.260 1.00 47.70 C
ATOM 7 C4' G B 598 15.827 132.743 88.207 1.00 46.88 C
ATOM 8 O4' G B 598 14.403 132.926 88.395 1.00 46.03 O
ATOM 9 C3' G B 598 16.340 132.570 89.624 1.00 48.36 C
ATOM 10 O3' G B 598 17.733 132.812 89.750 1.00 50.94 O
ATOM 11 C2' G B 598 15.518 133.602 90.373 1.00 47.17 C
ATOM 12 O2' G B 598 16.005 134.907 90.144 1.00 48.66 O
ATOM 13 C1' G B 598 14.157 133.427 89.699 1.00 45.08 C
ATOM 14 N9 G B 598 13.322 132.467 90.411 1.00 42.57 N
ATOM 15 C8 G B 598 13.073 131.160 90.067 1.00 41.68 C
ATOM 16 N7 G B 598 12.291 130.548 90.916 1.00 42.09 N
ATOM 17 C5 G B 598 12.001 131.512 91.875 1.00 42.31 C
ATOM 18 C6 G B 598 11.187 131.441 93.050 1.00 42.89 C
ATOM 19 O6 G B 598 10.547 130.479 93.492 1.00 43.54 O
ATOM 20 N1 G B 598 11.163 132.652 93.730 1.00 41.72 N
ATOM 21 C2 G B 598 11.830 133.787 93.344 1.00 42.65 C
ATOM 22 N2 G B 598 11.669 134.860 94.136 1.00 42.65 N
ATOM 23 N3 G B 598 12.596 133.867 92.260 1.00 42.03 N
ATOM 24 C4 G B 598 12.631 132.701 91.577 1.00 42.47 C
ATOM 25 P U B 599 18.595 131.936 90.785 1.00 50.61 P
ATOM 26 OP1 U B 599 20.016 132.211 90.476 1.00 49.83 O
ATOM 27 OP2 U B 599 18.081 130.540 90.727 1.00 48.89 O
ATOM 28 O5' U B 599 18.253 132.557 92.208 1.00 48.46 O
TER
ATOM 2 P G A 516 11.442 145.394 93.452 1.00 62.75 P
ATOM 3 OP1 G A 516 10.090 145.658 94.029 1.00 62.85 O
ATOM 4 OP2 G A 516 12.647 145.919 94.147 1.00 62.95 O
ATOM 5 O5' G A 516 11.610 143.820 93.274 1.00 60.61 O
ATOM 6 C5' G A 516 10.526 143.020 92.778 1.00 61.69 C
ATOM 7 C4' G A 516 10.955 141.580 92.646 1.00 62.35 C
ATOM 8 O4' G A 516 12.029 141.491 91.670 1.00 62.27 O
ATOM 9 C3' G A 516 11.549 140.949 93.897 1.00 62.33 C
ATOM 10 O3' G A 516 10.562 140.522 94.830 1.00 62.49 O
ATOM 11 C2' G A 516 12.373 139.806 93.314 1.00 62.06 C
ATOM 12 O2' G A 516 11.609 138.676 92.940 1.00 61.07 O
ATOM 13 C1' G A 516 12.947 140.475 92.062 1.00 61.40 C
ATOM 14 N9 G A 516 14.245 141.091 92.337 1.00 59.01 N
ATOM 15 C8 G A 516 14.519 142.422 92.561 1.00 58.11 C
ATOM 16 N7 G A 516 15.779 142.648 92.817 1.00 57.33 N
ATOM 17 C5 G A 516 16.372 141.394 92.748 1.00 57.57 C
ATOM 18 C6 G A 516 17.724 141.004 92.933 1.00 56.68 C
ATOM 19 O6 G A 516 18.698 141.711 93.210 1.00 55.39 O
ATOM 20 N1 G A 516 17.885 139.630 92.765 1.00 55.95 N
ATOM 21 C2 G A 516 16.873 138.747 92.465 1.00 56.36 C
ATOM 22 N2 G A 516 17.215 137.459 92.344 1.00 56.97 N
ATOM 23 N3 G A 516 15.616 139.099 92.296 1.00 56.60 N
ATOM 24 C4 G A 516 15.438 140.426 92.448 1.00 57.64 C
ATOM 25 P G A 517 10.828 140.712 96.407 1.00 64.11 P
ATOM 26 OP1 G A 517 9.553 140.407 97.117 1.00 63.98 O
ATOM 27 OP2 G A 517 11.493 142.023 96.635 1.00 63.68 O
ATOM 28 O5' G A 517 11.876 139.563 96.755 1.00 62.85 O
TER
ATOM 1 O3' U B 597 14.618 129.156 85.902 1.00 55.21 O
ATOM 2 P G B 598 15.751 128.989 87.029 1.00 54.71 P
ATOM 3 OP1 G B 598 17.057 128.933 86.299 1.00 53.25 O
ATOM 4 OP2 G B 598 15.357 127.861 87.918 1.00 53.13 O
ATOM 5 O5' G B 598 15.654 130.352 87.853 1.00 50.23 O
ATOM 6 C5' G B 598 16.068 131.595 87.260 1.00 47.70 C
ATOM 7 C4' G B 598 15.827 132.743 88.207 1.00 46.88 C
ATOM 8 O4' G B 598 14.403 132.926 88.395 1.00 46.03 O
ATOM 9 C3' G B 598 16.340 132.570 89.624 1.00 48.36 C
ATOM 10 O3' G B 598 17.733 132.812 89.750 1.00 50.94 O
ATOM 11 C2' G B 598 15.518 133.602 90.373 1.00 47.17 C
ATOM 12 O2' G B 598 16.005 134.907 90.144 1.00 48.66 O
ATOM 13 C1' G B 598 14.157 133.427 89.699 1.00 45.08 C
ATOM 14 N9 G B 598 13.322 132.467 90.411 1.00 42.57 N
ATOM 15 C8 G B 598 13.073 131.160 90.067 1.00 41.68 C
ATOM 16 N7 G B 598 12.291 130.548 90.916 1.00 42.09 N
ATOM 17 C5 G B 598 12.001 131.512 91.875 1.00 42.31 C
ATOM 18 C6 G B 598 11.187 131.441 93.050 1.00 42.89 C
ATOM 19 O6 G B 598 10.547 130.479 93.492 1.00 43.54 O
ATOM 20 N1 G B 598 11.163 132.652 93.730 1.00 41.72 N
ATOM 21 C2 G B 598 11.830 133.787 93.344 1.00 42.65 C
ATOM 22 N2 G B 598 11.669 134.860 94.136 1.00 42.65 N
ATOM 23 N3 G B 598 12.596 133.867 92.260 1.00 42.03 N
ATOM 24 C4 G B 598 12.631 132.701 91.577 1.00 42.47 C
ATOM 25 P U B 599 18.595 131.936 90.785 1.00 50.61 P
ATOM 26 OP1 U B 599 20.016 132.211 90.476 1.00 49.83 O
ATOM 27 OP2 U B 599 18.081 130.540 90.727 1.00 48.89 O
ATOM 28 O5' U B 599 18.253 132.557 92.208 1.00 48.46 O
TER
Atoms:
OP1: (10.090,145.658,94.029)
OP2: (12.647,145.919,94.147)
C3': (11.549,140.949,93.897)
C1': (12.947,140.475,92.062)
C5': (10.526,143.020,92.778)
O6: (18.698,141.711,93.210)
O4': (12.029,141.491,91.670)
C8: (14.519,142.422,92.561)
C2: (16.873,138.747,92.465)
C6: (17.724,141.004,92.933)
C5: (16.372,141.394,92.748)
C4: (15.438,140.426,92.448)
P: (11.442,145.394,93.452)
C4': (10.955,141.580,92.646)
C2': (12.373,139.806,93.314)
O2': (11.609,138.676,92.940)
N1: (17.885,139.630,92.765)
N2: (17.215,137.459,92.344)
N3: (15.616,139.099,92.296)
N7: (15.779,142.648,92.817)
N9: (14.245,141.091,92.337)
O5': (11.610,143.820,93.274)
O3': (10.562,140.522,94.830)
OP2: (12.647,145.919,94.147)
C3': (11.549,140.949,93.897)
C1': (12.947,140.475,92.062)
C5': (10.526,143.020,92.778)
O6: (18.698,141.711,93.210)
O4': (12.029,141.491,91.670)
C8: (14.519,142.422,92.561)
C2: (16.873,138.747,92.465)
C6: (17.724,141.004,92.933)
C5: (16.372,141.394,92.748)
C4: (15.438,140.426,92.448)
P: (11.442,145.394,93.452)
C4': (10.955,141.580,92.646)
C2': (12.373,139.806,93.314)
O2': (11.609,138.676,92.940)
N1: (17.885,139.630,92.765)
N2: (17.215,137.459,92.344)
N3: (15.616,139.099,92.296)
N7: (15.779,142.648,92.817)
N9: (14.245,141.091,92.337)
O5': (11.610,143.820,93.274)
O3': (10.562,140.522,94.830)
OP1: (17.057,128.933,86.299)
OP2: (15.357,127.861,87.918)
C3': (16.340,132.570,89.624)
C1': (14.157,133.427,89.699)
C5': (16.068,131.595,87.260)
O6: (10.547,130.479,93.492)
O4': (14.403,132.926,88.395)
C8: (13.073,131.160,90.067)
C2: (11.830,133.787,93.344)
C6: (11.187,131.441,93.050)
C5: (12.001,131.512,91.875)
C4: (12.631,132.701,91.577)
P: (15.751,128.989,87.029)
C4': (15.827,132.743,88.207)
C2': (15.518,133.602,90.373)
O2': (16.005,134.907,90.144)
N1: (11.163,132.652,93.730)
N2: (11.669,134.860,94.136)
N3: (12.596,133.867,92.260)
N7: (12.291,130.548,90.916)
N9: (13.322,132.467,90.411)
O5': (15.654,130.352,87.853)
O3': (17.733,132.812,89.750)
OP2: (15.357,127.861,87.918)
C3': (16.340,132.570,89.624)
C1': (14.157,133.427,89.699)
C5': (16.068,131.595,87.260)
O6: (10.547,130.479,93.492)
O4': (14.403,132.926,88.395)
C8: (13.073,131.160,90.067)
C2: (11.830,133.787,93.344)
C6: (11.187,131.441,93.050)
C5: (12.001,131.512,91.875)
C4: (12.631,132.701,91.577)
P: (15.751,128.989,87.029)
C4': (15.827,132.743,88.207)
C2': (15.518,133.602,90.373)
O2': (16.005,134.907,90.144)
N1: (11.163,132.652,93.730)
N2: (11.669,134.860,94.136)
N3: (12.596,133.867,92.260)
N7: (12.291,130.548,90.916)
N9: (13.322,132.467,90.411)
O5': (15.654,130.352,87.853)
O3': (17.733,132.812,89.750)
Image (generated by PyMOL):